[INFO] cloning repository https://github.com/Benncs/BioMC_PostProcess
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Benncs/BioMC_PostProcess" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FBenncs%2FBioMC_PostProcess", kill_on_drop: false }`
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[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
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[INFO] checking Benncs/BioMC_PostProcess against master#8f21a5c92ea55c348c275a1bc4fedbdf181e0d64 for pr-143011
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FBenncs%2FBioMC_PostProcess" "/workspace/builds/worker-1-tc1/source", kill_on_drop: false }`
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[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/Benncs/BioMC_PostProcess
[INFO] finished tweaking git repo https://github.com/Benncs/BioMC_PostProcess
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[INFO] validating manifest of git repo https://github.com/Benncs/BioMC_PostProcess on toolchain 8f21a5c92ea55c348c275a1bc4fedbdf181e0d64
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[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]   --> core/src/impl_concat.rs:55:44
[INFO] [stdout]    |
[INFO] [stdout] 55 |     fn get_spatial_average_property(&self, key:&str) ->  Result<Array2<f64>, ApiError>
[INFO] [stdout]    |                                            ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `phase`
[INFO] [stdout]   --> core/src/impl_concat.rs:60:34
[INFO] [stdout]    |
[INFO] [stdout] 60 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<f64> {
[INFO] [stdout]    |                                  ^^^^^ help: if this is intentional, prefix it with an underscore: `_phase`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `species`
[INFO] [stdout]   --> core/src/impl_concat.rs:64:41
[INFO] [stdout]    |
[INFO] [stdout] 64 |     fn get_variance_concentration(&self,species:usize,phase:Phase)-> Result<Array1<f64>, ApiError>
[INFO] [stdout]    |                                         ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_species`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `phase`
[INFO] [stdout]   --> core/src/impl_concat.rs:64:55
[INFO] [stdout]    |
[INFO] [stdout] 64 |     fn get_variance_concentration(&self,species:usize,phase:Phase)-> Result<Array1<f64>, ApiError>
[INFO] [stdout]    |                                                       ^^^^^ help: if this is intentional, prefix it with an underscore: `_phase`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]    --> core/src/impl_concat.rs:191:30
[INFO] [stdout]     |
[INFO] [stdout] 191 |     fn get_properties(&self, key: &str, i_export: usize) -> Result<Array1<f64>, ApiError> {
[INFO] [stdout]     |                              ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i_export`
[INFO] [stdout]    --> core/src/impl_concat.rs:191:41
[INFO] [stdout]     |
[INFO] [stdout] 191 |     fn get_properties(&self, key: &str, i_export: usize) -> Result<Array1<f64>, ApiError> {
[INFO] [stdout]     |                                         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_i_export`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]    --> core/src/impl_concat.rs:195:40
[INFO] [stdout]     |
[INFO] [stdout] 195 |     fn get_time_population_mean(&self, key: &str) -> Result<Array1<f64>, ApiError> {
[INFO] [stdout]     |                                        ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `n_bins`
[INFO] [stdout]    --> core/src/impl_concat.rs:201:9
[INFO] [stdout]     |
[INFO] [stdout] 201 |         n_bins: usize,
[INFO] [stdout]     |         ^^^^^^ help: if this is intentional, prefix it with an underscore: `_n_bins`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i_export`
[INFO] [stdout]    --> core/src/impl_concat.rs:202:9
[INFO] [stdout]     |
[INFO] [stdout] 202 |         i_export: usize,
[INFO] [stdout]     |         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_i_export`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]    --> core/src/impl_concat.rs:203:9
[INFO] [stdout]     |
[INFO] [stdout] 203 |         key: &str,
[INFO] [stdout]     |         ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `n_bins`
[INFO] [stdout]    --> core/src/impl_concat.rs:210:9
[INFO] [stdout]     |
[INFO] [stdout] 210 |         n_bins: usize,
[INFO] [stdout]     |         ^^^^^^ help: if this is intentional, prefix it with an underscore: `_n_bins`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i_export`
[INFO] [stdout]    --> core/src/impl_concat.rs:211:9
[INFO] [stdout]     |
[INFO] [stdout] 211 |         i_export: usize,
[INFO] [stdout]     |         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_i_export`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]    --> core/src/impl_concat.rs:212:9
[INFO] [stdout]     |
[INFO] [stdout] 212 |         key: &str,
[INFO] [stdout]     |         ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]    --> core/src/impl_concat.rs:217:35
[INFO] [stdout]     |
[INFO] [stdout] 217 |     fn get_population_mean(&self, key: &str, i_export: usize) -> Result<f64, ApiError> {
[INFO] [stdout]     |                                   ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i_export`
[INFO] [stdout]    --> core/src/impl_concat.rs:217:46
[INFO] [stdout]     |
[INFO] [stdout] 217 |     fn get_population_mean(&self, key: &str, i_export: usize) -> Result<f64, ApiError> {
[INFO] [stdout]     |                                              ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_i_export`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `position`
[INFO] [stdout]    --> core/src/impl_unique.rs:223:9
[INFO] [stdout]     |
[INFO] [stdout] 223 |         position: usize,
[INFO] [stdout]     |         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_position`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `n_node_thread` is never read
[INFO] [stdout]   --> core/src/datamodel/main_file.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 10 | pub struct Misc {
[INFO] [stdout]    |            ---- field in this struct
[INFO] [stdout] 11 |     pub n_node_thread: u64,
[INFO] [stdout]    |         ^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Misc` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: multiple fields are never read
[INFO] [stdout]   --> core/src/datamodel/main_file.rs:33:9
[INFO] [stdout]    |
[INFO] [stdout] 32 | pub struct MainInitial {
[INFO] [stdout]    |            ----------- fields in this struct
[INFO] [stdout] 33 |     pub delta_time: f64,
[INFO] [stdout]    |         ^^^^^^^^^^
[INFO] [stdout] 34 |     pub final_time: f64,
[INFO] [stdout]    |         ^^^^^^^^^^
[INFO] [stdout] 35 |     pub initial_biomass_concentration: f64,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 36 |     pub initial_weight: f64,
[INFO] [stdout] 37 |     pub n_map: usize,
[INFO] [stdout]    |         ^^^^^
[INFO] [stdout] 38 |     pub number_compartment: usize,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 39 |     pub number_particles: u64,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^
[INFO] [stdout] 40 |     pub t_per_flow_map: f64,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `MainInitial` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `events` and `number_particles` are never read
[INFO] [stdout]   --> core/src/datamodel/main_file.rs:46:9
[INFO] [stdout]    |
[INFO] [stdout] 45 | pub struct MainFInal {
[INFO] [stdout]    |            --------- fields in this struct
[INFO] [stdout] 46 |     pub events: Option<HashMap<String, u64>>,
[INFO] [stdout]    |         ^^^^^^
[INFO] [stdout] 47 |     pub number_particles: u64,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `MainFInal` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `cfinal` is never read
[INFO] [stdout]   --> core/src/datamodel/main_file.rs:55:9
[INFO] [stdout]    |
[INFO] [stdout] 52 | pub struct MainResult {
[INFO] [stdout]    |            ---------- field in this struct
[INFO] [stdout] ...
[INFO] [stdout] 55 |     pub cfinal: Option<MainFInal>, //TODO Add runtime parameter to throw error or not when missing
[INFO] [stdout]    |         ^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `MainResult` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `normalize_concentration` is never used
[INFO] [stdout]   --> core/src/process/mod.rs:16:8
[INFO] [stdout]    |
[INFO] [stdout] 16 | pub fn normalize_concentration(
[INFO] [stdout]    |        ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `variance_concentration_from_mean` is never used
[INFO] [stdout]   --> core/src/process/mod.rs:32:8
[INFO] [stdout]    |
[INFO] [stdout] 32 | pub fn variance_concentration_from_mean(
[INFO] [stdout]    |        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing
[INFO] [stdout]   --> core/src/api.rs:87:27
[INFO] [stdout]    |
[INFO] [stdout] 87 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<f64>;
[INFO] [stdout]    |                           ^^^^^                   --------------- the lifetime gets resolved as `'_`
[INFO] [stdout]    |                           |
[INFO] [stdout]    |                           this lifetime flows to the output
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths
[INFO] [stdout]    |
[INFO] [stdout] 87 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<'_, f64>;
[INFO] [stdout]    |                                                              +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing
[INFO] [stdout]   --> core/src/datamodel/tallies.rs:45:21
[INFO] [stdout]    |
[INFO] [stdout] 45 |     pub fn to_array(&self)->ArrayView2<f64>
[INFO] [stdout]    |                     ^^^^^   --------------- the lifetime gets resolved as `'_`
[INFO] [stdout]    |                     |
[INFO] [stdout]    |                     this lifetime flows to the output
[INFO] [stdout]    |
[INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths
[INFO] [stdout]    |
[INFO] [stdout] 45 |     pub fn to_array(&self)->ArrayView2<'_, f64>
[INFO] [stdout]    |                                        +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing
[INFO] [stdout]   --> core/src/impl_concat.rs:60:27
[INFO] [stdout]    |
[INFO] [stdout] 60 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<f64> {
[INFO] [stdout]    |                           ^^^^^                   --------------- the lifetime gets resolved as `'_`
[INFO] [stdout]    |                           |
[INFO] [stdout]    |                           this lifetime flows to the output
[INFO] [stdout]    |
[INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths
[INFO] [stdout]    |
[INFO] [stdout] 60 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<'_, f64> {
[INFO] [stdout]    |                                                              +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing
[INFO] [stdout]    --> core/src/impl_unique.rs:148:27
[INFO] [stdout]     |
[INFO] [stdout] 148 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<f64> {
[INFO] [stdout]     |                           ^^^^^                   --------------- the lifetime gets resolved as `'_`
[INFO] [stdout]     |                           |
[INFO] [stdout]     |                           this lifetime flows to the output
[INFO] [stdout]     |
[INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths
[INFO] [stdout]     |
[INFO] [stdout] 148 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<'_, f64> {
[INFO] [stdout]     |                                                              +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]   --> core/src/impl_concat.rs:55:44
[INFO] [stdout]    |
[INFO] [stdout] 55 |     fn get_spatial_average_property(&self, key:&str) ->  Result<Array2<f64>, ApiError>
[INFO] [stdout]    |                                            ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `phase`
[INFO] [stdout]   --> core/src/impl_concat.rs:60:34
[INFO] [stdout]    |
[INFO] [stdout] 60 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<f64> {
[INFO] [stdout]    |                                  ^^^^^ help: if this is intentional, prefix it with an underscore: `_phase`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `species`
[INFO] [stdout]   --> core/src/impl_concat.rs:64:41
[INFO] [stdout]    |
[INFO] [stdout] 64 |     fn get_variance_concentration(&self,species:usize,phase:Phase)-> Result<Array1<f64>, ApiError>
[INFO] [stdout]    |                                         ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_species`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `phase`
[INFO] [stdout]   --> core/src/impl_concat.rs:64:55
[INFO] [stdout]    |
[INFO] [stdout] 64 |     fn get_variance_concentration(&self,species:usize,phase:Phase)-> Result<Array1<f64>, ApiError>
[INFO] [stdout]    |                                                       ^^^^^ help: if this is intentional, prefix it with an underscore: `_phase`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]    --> core/src/impl_concat.rs:191:30
[INFO] [stdout]     |
[INFO] [stdout] 191 |     fn get_properties(&self, key: &str, i_export: usize) -> Result<Array1<f64>, ApiError> {
[INFO] [stdout]     |                              ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i_export`
[INFO] [stdout]    --> core/src/impl_concat.rs:191:41
[INFO] [stdout]     |
[INFO] [stdout] 191 |     fn get_properties(&self, key: &str, i_export: usize) -> Result<Array1<f64>, ApiError> {
[INFO] [stdout]     |                                         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_i_export`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]    --> core/src/impl_concat.rs:195:40
[INFO] [stdout]     |
[INFO] [stdout] 195 |     fn get_time_population_mean(&self, key: &str) -> Result<Array1<f64>, ApiError> {
[INFO] [stdout]     |                                        ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `n_bins`
[INFO] [stdout]    --> core/src/impl_concat.rs:201:9
[INFO] [stdout]     |
[INFO] [stdout] 201 |         n_bins: usize,
[INFO] [stdout]     |         ^^^^^^ help: if this is intentional, prefix it with an underscore: `_n_bins`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i_export`
[INFO] [stdout]    --> core/src/impl_concat.rs:202:9
[INFO] [stdout]     |
[INFO] [stdout] 202 |         i_export: usize,
[INFO] [stdout]     |         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_i_export`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]    --> core/src/impl_concat.rs:203:9
[INFO] [stdout]     |
[INFO] [stdout] 203 |         key: &str,
[INFO] [stdout]     |         ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `n_bins`
[INFO] [stdout]    --> core/src/impl_concat.rs:210:9
[INFO] [stdout]     |
[INFO] [stdout] 210 |         n_bins: usize,
[INFO] [stdout]     |         ^^^^^^ help: if this is intentional, prefix it with an underscore: `_n_bins`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i_export`
[INFO] [stdout]    --> core/src/impl_concat.rs:211:9
[INFO] [stdout]     |
[INFO] [stdout] 211 |         i_export: usize,
[INFO] [stdout]     |         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_i_export`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]    --> core/src/impl_concat.rs:212:9
[INFO] [stdout]     |
[INFO] [stdout] 212 |         key: &str,
[INFO] [stdout]     |         ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `key`
[INFO] [stdout]    --> core/src/impl_concat.rs:217:35
[INFO] [stdout]     |
[INFO] [stdout] 217 |     fn get_population_mean(&self, key: &str, i_export: usize) -> Result<f64, ApiError> {
[INFO] [stdout]     |                                   ^^^ help: if this is intentional, prefix it with an underscore: `_key`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i_export`
[INFO] [stdout]    --> core/src/impl_concat.rs:217:46
[INFO] [stdout]     |
[INFO] [stdout] 217 |     fn get_population_mean(&self, key: &str, i_export: usize) -> Result<f64, ApiError> {
[INFO] [stdout]     |                                              ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_i_export`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `position`
[INFO] [stdout]    --> core/src/impl_unique.rs:223:9
[INFO] [stdout]     |
[INFO] [stdout] 223 |         position: usize,
[INFO] [stdout]     |         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_position`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `n_node_thread` is never read
[INFO] [stdout]   --> core/src/datamodel/main_file.rs:11:9
[INFO] [stdout]    |
[INFO] [stdout] 10 | pub struct Misc {
[INFO] [stdout]    |            ---- field in this struct
[INFO] [stdout] 11 |     pub n_node_thread: u64,
[INFO] [stdout]    |         ^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Misc` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: multiple fields are never read
[INFO] [stdout]   --> core/src/datamodel/main_file.rs:33:9
[INFO] [stdout]    |
[INFO] [stdout] 32 | pub struct MainInitial {
[INFO] [stdout]    |            ----------- fields in this struct
[INFO] [stdout] 33 |     pub delta_time: f64,
[INFO] [stdout]    |         ^^^^^^^^^^
[INFO] [stdout] 34 |     pub final_time: f64,
[INFO] [stdout]    |         ^^^^^^^^^^
[INFO] [stdout] 35 |     pub initial_biomass_concentration: f64,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 36 |     pub initial_weight: f64,
[INFO] [stdout] 37 |     pub n_map: usize,
[INFO] [stdout]    |         ^^^^^
[INFO] [stdout] 38 |     pub number_compartment: usize,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 39 |     pub number_particles: u64,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^
[INFO] [stdout] 40 |     pub t_per_flow_map: f64,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `MainInitial` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `events` and `number_particles` are never read
[INFO] [stdout]   --> core/src/datamodel/main_file.rs:46:9
[INFO] [stdout]    |
[INFO] [stdout] 45 | pub struct MainFInal {
[INFO] [stdout]    |            --------- fields in this struct
[INFO] [stdout] 46 |     pub events: Option<HashMap<String, u64>>,
[INFO] [stdout]    |         ^^^^^^
[INFO] [stdout] 47 |     pub number_particles: u64,
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `MainFInal` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `cfinal` is never read
[INFO] [stdout]   --> core/src/datamodel/main_file.rs:55:9
[INFO] [stdout]    |
[INFO] [stdout] 52 | pub struct MainResult {
[INFO] [stdout]    |            ---------- field in this struct
[INFO] [stdout] ...
[INFO] [stdout] 55 |     pub cfinal: Option<MainFInal>, //TODO Add runtime parameter to throw error or not when missing
[INFO] [stdout]    |         ^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `MainResult` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `normalize_concentration` is never used
[INFO] [stdout]   --> core/src/process/mod.rs:16:8
[INFO] [stdout]    |
[INFO] [stdout] 16 | pub fn normalize_concentration(
[INFO] [stdout]    |        ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `variance_concentration_from_mean` is never used
[INFO] [stdout]   --> core/src/process/mod.rs:32:8
[INFO] [stdout]    |
[INFO] [stdout] 32 | pub fn variance_concentration_from_mean(
[INFO] [stdout]    |        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing
[INFO] [stdout]   --> core/src/api.rs:87:27
[INFO] [stdout]    |
[INFO] [stdout] 87 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<f64>;
[INFO] [stdout]    |                           ^^^^^                   --------------- the lifetime gets resolved as `'_`
[INFO] [stdout]    |                           |
[INFO] [stdout]    |                           this lifetime flows to the output
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths
[INFO] [stdout]    |
[INFO] [stdout] 87 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<'_, f64>;
[INFO] [stdout]    |                                                              +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing
[INFO] [stdout]   --> core/src/datamodel/tallies.rs:45:21
[INFO] [stdout]    |
[INFO] [stdout] 45 |     pub fn to_array(&self)->ArrayView2<f64>
[INFO] [stdout]    |                     ^^^^^   --------------- the lifetime gets resolved as `'_`
[INFO] [stdout]    |                     |
[INFO] [stdout]    |                     this lifetime flows to the output
[INFO] [stdout]    |
[INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths
[INFO] [stdout]    |
[INFO] [stdout] 45 |     pub fn to_array(&self)->ArrayView2<'_, f64>
[INFO] [stdout]    |                                        +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing
[INFO] [stdout]   --> core/src/impl_concat.rs:60:27
[INFO] [stdout]    |
[INFO] [stdout] 60 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<f64> {
[INFO] [stdout]    |                           ^^^^^                   --------------- the lifetime gets resolved as `'_`
[INFO] [stdout]    |                           |
[INFO] [stdout]    |                           this lifetime flows to the output
[INFO] [stdout]    |
[INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths
[INFO] [stdout]    |
[INFO] [stdout] 60 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<'_, f64> {
[INFO] [stdout]    |                                                              +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: lifetime flowing from input to output with different syntax can be confusing
[INFO] [stdout]    --> core/src/impl_unique.rs:148:27
[INFO] [stdout]     |
[INFO] [stdout] 148 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<f64> {
[INFO] [stdout]     |                           ^^^^^                   --------------- the lifetime gets resolved as `'_`
[INFO] [stdout]     |                           |
[INFO] [stdout]     |                           this lifetime flows to the output
[INFO] [stdout]     |
[INFO] [stdout] help: one option is to remove the lifetime for references and use the anonymous lifetime for paths
[INFO] [stdout]     |
[INFO] [stdout] 148 |     fn get_concentrations(&self, phase: Phase) -> ArrayView3<'_, f64> {
[INFO] [stdout]     |                                                              +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling rinja_derive v0.3.5
[INFO] [stderr]     Checking rinja v0.3.5
[INFO] [stderr]     Checking python_wrap v0.4.4 (/opt/rustwide/workdir/python_wrap)
[INFO] [stdout] warning: unused variable: `py`
[INFO] [stdout]    --> python_wrap/src/lib.rs:363:35
[INFO] [stdout]     |
[INFO] [stdout] 363 |     pub fn get_csv_tallies(&self, py: Python<'_>) -> PyResult<String> {
[INFO] [stdout]     |                                   ^^ help: if this is intentional, prefix it with an underscore: `_py`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `py`
[INFO] [stdout]    --> python_wrap/src/lib.rs:363:35
[INFO] [stdout]     |
[INFO] [stdout] 363 |     pub fn get_csv_tallies(&self, py: Python<'_>) -> PyResult<String> {
[INFO] [stdout]     |                                   ^^ help: if this is intentional, prefix it with an underscore: `_py`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] warning: plotly_kaleido@0.12.1: Downloaded Plotly Kaleido from https://github.com/plotly/Kaleido/releases/download/v0.2.1/kaleido_linux_x64.zip to '/root/.config/kaleido'
[INFO] [stderr] error: failed to run custom build command for `plotly_kaleido v0.12.1`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/plotly_kaleido-8d6239c8e82643e8/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   cargo:rerun-if-changed=src/lib.rs
[INFO] [stderr]   cargo::rerun-if-changed=/root/.config/kaleido/bin/kaleido
[INFO] [stderr]   cargo:rustc-env=KALEIDO_COMPILE_TIME_DLD_PATH=/root/.config/kaleido
[INFO] [stderr]   cargo::warning=Downloaded Plotly Kaleido from https://github.com/plotly/Kaleido/releases/download/v0.2.1/kaleido_linux_x64.zip to '/root/.config/kaleido'
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]       Updating crates.io index
[INFO] [stderr]   warning: spurious network error (3 tries remaining): [6] Could not resolve hostname (Could not resolve host: index.crates.io)
[INFO] [stderr]   warning: spurious network error (2 tries remaining): [6] Could not resolve hostname (Could not resolve host: index.crates.io)
[INFO] [stderr]   warning: spurious network error (1 try remaining): [6] Could not resolve hostname (Could not resolve host: index.crates.io)
[INFO] [stderr]   error: download of config.json failed
[INFO] [stderr] 
[INFO] [stderr]   Caused by:
[INFO] [stderr]     failed to download from `https://index.crates.io/config.json`
[INFO] [stderr] 
[INFO] [stderr]   Caused by:
[INFO] [stderr]     [6] Could not resolve hostname (Could not resolve host: index.crates.io)
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/plotly_kaleido-0.12.1/build.rs:139:14:
[INFO] [stderr]   called `Result::unwrap()` on an `Err` value: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x62cb8289c712 - std::backtrace_rs::backtrace::libunwind::trace::h77d4f1ab393021ff
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stderr]      1:     0x62cb8289c712 - std::backtrace_rs::backtrace::trace_unsynchronized::h6b52b199056dc310
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stderr]      2:     0x62cb8289c712 - std::sys::backtrace::_print_fmt::h336a00096dca5793
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/sys/backtrace.rs:66:9
[INFO] [stderr]      3:     0x62cb8289c712 - <std::sys::backtrace::BacktraceLock::print::DisplayBacktrace as core::fmt::Display>::fmt::h4e23cde6d13531e6
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/sys/backtrace.rs:39:26
[INFO] [stderr]      4:     0x62cb828bd943 - core::fmt::rt::Argument::fmt::hd73adb1dd4f13238
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/core/src/fmt/rt.rs:173:76
[INFO] [stderr]      5:     0x62cb828bd943 - core::fmt::write::h24956daaf3520b88
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/core/src/fmt/mod.rs:1465:25
[INFO] [stderr]      6:     0x62cb82899c33 - std::io::default_write_fmt::h5ad85cda2d892f3f
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/io/mod.rs:639:11
[INFO] [stderr]      7:     0x62cb82899c33 - std::io::Write::write_fmt::h744a9c29e898aaa0
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/io/mod.rs:1954:13
[INFO] [stderr]      8:     0x62cb8289c562 - std::sys::backtrace::BacktraceLock::print::h80bc63112117b07d
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/sys/backtrace.rs:42:9
[INFO] [stderr]      9:     0x62cb8289d7e6 - std::panicking::default_hook::{{closure}}::hcc0250ffe151a9a2
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/panicking.rs:300:27
[INFO] [stderr]     10:     0x62cb8289d5e9 - std::panicking::default_hook::heb98c3e6f5363c1c
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/panicking.rs:327:9
[INFO] [stderr]     11:     0x62cb8289e0b2 - std::panicking::rust_panic_with_hook::ha71490f06bda8fdd
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/panicking.rs:833:13
[INFO] [stderr]     12:     0x62cb8289df4a - std::panicking::begin_panic_handler::{{closure}}::h842d98411b820c95
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/panicking.rs:706:13
[INFO] [stderr]     13:     0x62cb8289cc09 - std::sys::backtrace::__rust_end_short_backtrace::hc17b54f5216e7287
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/sys/backtrace.rs:168:18
[INFO] [stderr]     14:     0x62cb8289dbdd - __rustc[d39aaf4d8a5bdd9]::rust_begin_unwind
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/panicking.rs:697:5
[INFO] [stderr]     15:     0x62cb828bcb60 - core::panicking::panic_fmt::hafddcaa47f3ecc5a
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/core/src/panicking.rs:75:14
[INFO] [stderr]     16:     0x62cb828bcfa6 - core::result::unwrap_failed::heb4e3621f080f33c
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/core/src/result.rs:1761:5
[INFO] [stderr]     17:     0x62cb8278a35a - build_script_build::main::h894cfa84e549e415
[INFO] [stderr]     18:     0x62cb8277e7e3 - core::ops::function::FnOnce::call_once::h7342f41e3e39f44a
[INFO] [stderr]     19:     0x62cb82783096 - std::sys::backtrace::__rust_begin_short_backtrace::h5b6c8e16c4c2f8bb
[INFO] [stderr]     20:     0x62cb82779da9 - std::rt::lang_start::{{closure}}::ha90a36f3578e90d8
[INFO] [stderr]     21:     0x62cb82895b80 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::ha6f9c4d44e1a5001
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/core/src/ops/function.rs:284:21
[INFO] [stderr]     22:     0x62cb82895b80 - std::panicking::catch_unwind::do_call::hf103a4d58b5b21e2
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/panicking.rs:589:40
[INFO] [stderr]     23:     0x62cb82895b80 - std::panicking::catch_unwind::hd0c31cdd71304f17
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/panicking.rs:552:19
[INFO] [stderr]     24:     0x62cb82895b80 - std::panic::catch_unwind::h434b753bad4487d0
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/panic.rs:359:14
[INFO] [stderr]     25:     0x62cb82895b80 - std::rt::lang_start_internal::{{closure}}::h26129cc9f6eb7a93
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/rt.rs:175:24
[INFO] [stderr]     26:     0x62cb82895b80 - std::panicking::catch_unwind::do_call::had764bf67fcbab3f
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/panicking.rs:589:40
[INFO] [stderr]     27:     0x62cb82895b80 - std::panicking::catch_unwind::h4085a8f2f773b27d
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/panicking.rs:552:19
[INFO] [stderr]     28:     0x62cb82895b80 - std::panic::catch_unwind::h3198cebd91ce9b7d
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/panic.rs:359:14
[INFO] [stderr]     29:     0x62cb82895b80 - std::rt::lang_start_internal::hf25b94b42aad689d
[INFO] [stderr]                                  at /rustc/8f21a5c92ea55c348c275a1bc4fedbdf181e0d64/library/std/src/rt.rs:171:5
[INFO] [stderr]     30:     0x62cb82779d91 - std::rt::lang_start::he1c9c652d1c93c7d
[INFO] [stderr]     31:     0x62cb8278a6e5 - main
[INFO] [stderr]     32:     0x772c53ed41ca - <unknown>
[INFO] [stderr]     33:     0x772c53ed428b - __libc_start_main
[INFO] [stderr]     34:     0x62cb827791e5 - _start
[INFO] [stderr]     35:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "676f3a7ef3c142da8ae57c532ba5940e17d7fd2b316a335700f7b54e69e27175", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "676f3a7ef3c142da8ae57c532ba5940e17d7fd2b316a335700f7b54e69e27175", kill_on_drop: false }`
[INFO] [stdout] 676f3a7ef3c142da8ae57c532ba5940e17d7fd2b316a335700f7b54e69e27175
