[INFO] cloning repository https://github.com/inc0/sdf-utils [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/inc0/sdf-utils" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finc0%2Fsdf-utils", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finc0%2Fsdf-utils'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] d3a325c1b6fe342717bb41796ce34e4afe681b0f [INFO] testing inc0/sdf-utils against try#17092ad00ed8fe1e7f81a7e38238ff70779034b1 for pr-140985 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finc0%2Fsdf-utils" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/inc0/sdf-utils on toolchain 17092ad00ed8fe1e7f81a7e38238ff70779034b1 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+17092ad00ed8fe1e7f81a7e38238ff70779034b1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/inc0/sdf-utils [INFO] finished tweaking git repo https://github.com/inc0/sdf-utils [INFO] tweaked toml for git repo https://github.com/inc0/sdf-utils written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/inc0/sdf-utils already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+17092ad00ed8fe1e7f81a7e38238ff70779034b1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [ERROR] error running command: no output for 300 seconds [INFO] testing inc0/sdf-utils against try#17092ad00ed8fe1e7f81a7e38238ff70779034b1 for pr-140985 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finc0%2Fsdf-utils" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/inc0/sdf-utils on toolchain 17092ad00ed8fe1e7f81a7e38238ff70779034b1 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+17092ad00ed8fe1e7f81a7e38238ff70779034b1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/inc0/sdf-utils [INFO] finished tweaking git repo https://github.com/inc0/sdf-utils [INFO] tweaked toml for git repo https://github.com/inc0/sdf-utils written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/inc0/sdf-utils already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+17092ad00ed8fe1e7f81a7e38238ff70779034b1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [ERROR] error running command: no output for 300 seconds [INFO] testing inc0/sdf-utils against try#17092ad00ed8fe1e7f81a7e38238ff70779034b1 for pr-140985 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finc0%2Fsdf-utils" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/inc0/sdf-utils on toolchain 17092ad00ed8fe1e7f81a7e38238ff70779034b1 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+17092ad00ed8fe1e7f81a7e38238ff70779034b1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/inc0/sdf-utils [INFO] finished tweaking git repo https://github.com/inc0/sdf-utils [INFO] tweaked toml for git repo https://github.com/inc0/sdf-utils written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/inc0/sdf-utils already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+17092ad00ed8fe1e7f81a7e38238ff70779034b1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [ERROR] error running command: no output for 300 seconds [INFO] testing inc0/sdf-utils against try#17092ad00ed8fe1e7f81a7e38238ff70779034b1 for pr-140985 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finc0%2Fsdf-utils" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/inc0/sdf-utils on toolchain 17092ad00ed8fe1e7f81a7e38238ff70779034b1 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+17092ad00ed8fe1e7f81a7e38238ff70779034b1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/inc0/sdf-utils [INFO] finished tweaking git repo https://github.com/inc0/sdf-utils [INFO] tweaked toml for git repo https://github.com/inc0/sdf-utils written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/inc0/sdf-utils already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+17092ad00ed8fe1e7f81a7e38238ff70779034b1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eea15d5475069c3ef791f10c2c6b5af2ee421ef2da1e680ecce1cba46243983b" "/opt/rustwide/cargo-home/bin/cargo" "+17092ad00ed8fe1e7f81a7e38238ff70779034b1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] d8769ee78eccc7673906485351b3ab0d8eeb6e25f223035d5fa0c56d9edbb1a9 [INFO] running `Command { std: "docker" "start" "-a" "d8769ee78eccc7673906485351b3ab0d8eeb6e25f223035d5fa0c56d9edbb1a9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "d8769ee78eccc7673906485351b3ab0d8eeb6e25f223035d5fa0c56d9edbb1a9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d8769ee78eccc7673906485351b3ab0d8eeb6e25f223035d5fa0c56d9edbb1a9", kill_on_drop: false }` [INFO] [stdout] d8769ee78eccc7673906485351b3ab0d8eeb6e25f223035d5fa0c56d9edbb1a9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eea15d5475069c3ef791f10c2c6b5af2ee421ef2da1e680ecce1cba46243983b" "/opt/rustwide/cargo-home/bin/cargo" "+17092ad00ed8fe1e7f81a7e38238ff70779034b1" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5c3f89d26990abadb5a1eee23196175c46932c046fdeac6146d6414efba28342 [INFO] running `Command { std: "docker" "start" "-a" "5c3f89d26990abadb5a1eee23196175c46932c046fdeac6146d6414efba28342", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.149 [INFO] [stderr] Compiling proc-macro2 v1.0.69 [INFO] [stderr] Compiling unicode-ident v1.0.12 [INFO] [stderr] Compiling utf8parse v0.2.1 [INFO] [stderr] Compiling anstyle v1.0.4 [INFO] [stderr] Compiling colorchoice v1.0.0 [INFO] [stderr] Compiling anstyle-query v1.0.0 [INFO] [stderr] Compiling heck v0.4.1 [INFO] [stderr] Compiling strsim v0.10.0 [INFO] [stderr] Compiling clap_lex v0.5.1 [INFO] [stderr] Compiling anstyle-parse v0.2.2 [INFO] [stderr] Compiling anstream v0.6.4 [INFO] [stderr] Compiling clap_builder v4.4.6 [INFO] [stderr] Compiling quote v1.0.33 [INFO] [stderr] Compiling syn v2.0.38 [INFO] [stderr] Compiling cc v1.0.83 [INFO] [stderr] Compiling cmake v0.1.50 [INFO] [stderr] Compiling chemfiles-sys v0.10.40 [INFO] [stderr] Compiling clap_derive v4.4.2 [INFO] [stderr] Compiling clap v4.4.6 [INFO] [stderr] error: failed to run custom build command for `chemfiles-sys v0.10.40` [INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation. [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/chemfiles-sys-43a7917f2040cc73/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_GENERATOR_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_GENERATOR_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE = None [INFO] [stderr] CMAKE = None [INFO] [stderr] running: cd "/opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build" && CMAKE_PREFIX_PATH="" "cmake" "/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.10.40/." "-DCHEMFILES_VERSION=0.10.4" "-DCHFL_RUST_PREBUILT_TARGET=x86_64-linux-gnu" "-DCHFL_RUST_PREBUILT_SHA256=2ac97eba5b79f8051cd86184e00379271c72e85d2bbcbcd50626b0ec602a1978" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Debug" [INFO] [stderr] -- The CXX compiler identification is GNU 13.3.0 [INFO] [stderr] -- Detecting CXX compiler ABI info [INFO] [stderr] -- Detecting CXX compiler ABI info - done [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ - skipped [INFO] [stderr] -- Detecting CXX compile features [INFO] [stderr] -- Detecting CXX compile features - done [INFO] [stderr] -- trying to download https://github.com/chemfiles/chemfiles-prebuilt/releases/download/v0.10.4/chemfiles-static.v0.10.4.x86_64-linux-gnu.tar.gz [INFO] [stderr] -- failed to download prebuilt chemfiles, building from sources [INFO] [stderr] -- The C compiler identification is GNU 13.3.0 [INFO] [stderr] -- Detecting C compiler ABI info [INFO] [stderr] -- Detecting C compiler ABI info - done [INFO] [stderr] -- Check for working C compiler: /usr/bin/cc - skipped [INFO] [stderr] -- Detecting C compile features [INFO] [stderr] -- Detecting C compile features - done [INFO] [stderr] -- Unpacking zlib sources [INFO] [stderr] -- Unpacking lzma sources [INFO] [stderr] -- Unpacking bzip2 sources [INFO] [stderr] -- Unpacking fmt sources [INFO] [stderr] -- Unpacking toml11 sources [INFO] [stderr] -- Unpacking tng sources [INFO] [stderr] -- Unpacking molfiles sources [INFO] [stderr] -- Unpacking mmtf-cpp sources [INFO] [stderr] -- Unpacking pugixml sources [INFO] [stderr] -- Unpacking gemmi sources [INFO] [stderr] -- Configuring done (16.4s) [INFO] [stderr] -- Generating done (0.0s) [INFO] [stderr] -- Build files have been written to: /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build [INFO] [stderr] running: cd "/opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build" && MAKEFLAGS="-j --jobserver-fds=8,9 --jobserver-auth=8,9" "cmake" "--build" "." "--target" "install" "--config" "Debug" [INFO] [stderr] [ 2%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/bwlzh.c.o [INFO] [stderr] [ 2%] Building CXX object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/molfiles/CMakeFiles/molfiles.dir/src/gromacsplugin.cxx.o [INFO] [stderr] [ 2%] Building CXX object chemfiles/external/CMakeFiles/pugixml.dir/pugixml/src/pugixml.cpp.o [INFO] [stderr] [ 3%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/bwt.c.o [INFO] [stderr] [ 3%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/coder.c.o [INFO] [stderr] [ 5%] Building CXX object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/fmt/CMakeFiles/fmt.dir/src/format.cc.o [INFO] [stderr] [ 6%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/adler32.c.o [INFO] [stderr] [ 6%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/dict.c.o [INFO] [stderr] [ 6%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/bzip2/CMakeFiles/bzip2.dir/blocksort.c.o [INFO] [stderr] [ 7%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/compress.c.o [INFO] [stderr] [ 7%] Building CXX object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/fmt/CMakeFiles/fmt.dir/src/os.cc.o [INFO] [stderr] [ 7%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/bzip2/CMakeFiles/bzip2.dir/huffman.c.o [INFO] [stderr] [ 9%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Atom.cpp.o [INFO] [stderr] [ 9%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/molfiles/CMakeFiles/molfiles.dir/src/moldenplugin.c.o [INFO] [stderr] [ 9%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/molfiles/CMakeFiles/molfiles.dir/src/psfplugin.c.o [INFO] [stderr] [ 10%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/check/check.c.o [INFO] [stderr] [ 10%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/fixpoint.c.o [INFO] [stderr] [ 10%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/check/crc32_fast.c.o [INFO] [stderr] [ 10%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Configuration.cpp.o [INFO] [stderr] [ 11%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/crc32.c.o [INFO] [stderr] [ 12%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Connectivity.cpp.o [INFO] [stderr] [ 13%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/check/crc32_table.c.o [INFO] [stderr] [ 13%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/File.cpp.o [INFO] [stderr] [ 14%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/huffman.c.o [INFO] [stderr] [ 14%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/deflate.c.o [INFO] [stderr] [ 14%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/bzip2/CMakeFiles/bzip2.dir/crctable.c.o [INFO] [stderr] [ 15%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Format.cpp.o [INFO] [stderr] [ 15%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/check/crc64_fast.c.o [INFO] [stderr] [ 16%] Building C object 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[INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at chemfiles/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Warning (dev) at chemfiles/CMakeLists.txt:35 (option): [INFO] [stderr] Policy CMP0077 is not set: option() honors normal variables. Run "cmake [INFO] [stderr] --help-policy CMP0077" for policy details. Use the cmake_policy command to [INFO] [stderr] set the policy and suppress this warning. [INFO] [stderr] [INFO] [stderr] For compatibility with older versions of CMake, option is clearing the [INFO] [stderr] normal variable 'BUILD_SHARED_LIBS'. [INFO] [stderr] This warning is for project developers. Use -Wno-dev to suppress it. [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/zlib/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/lzma/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/bzip2/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/fmt/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/tng/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-7d998ed8e2b40016/out/build/chemfiles/external/molfiles/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Warning: [INFO] [stderr] Manually-specified variables were not used by the project: [INFO] [stderr] [INFO] [stderr] CMAKE_ASM_COMPILER [INFO] [stderr] CMAKE_ASM_FLAGS [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:90: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Configuration.cpp.o] Error 1 [INFO] [stderr] gmake[2]: *** Waiting for unfinished jobs.... [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:146: chemfiles/CMakeFiles/chemfiles_objects.dir/src/FormatFactory.cpp.o] Error 1 [INFO] [stderr] gmake[1]: *** [CMakeFiles/Makefile2:214: chemfiles/CMakeFiles/chemfiles_objects.dir/all] Error 2 [INFO] [stderr] gmake: *** [Makefile:136: all] Error 2 [INFO] [stderr] [INFO] [stderr] thread 'main' panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/cmake-0.1.50/src/lib.rs:1098:5: [INFO] [stderr] [INFO] [stderr] command did not execute successfully, got: exit status: 2 [INFO] [stderr] [INFO] [stderr] build script failed, must exit now [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x6349c80cd292 - std::backtrace_rs::backtrace::libunwind::trace::h2bdbdb423cc746ad [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stderr] 1: 0x6349c80cd292 - std::backtrace_rs::backtrace::trace_unsynchronized::h876081fa48c0856a [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stderr] 2: 0x6349c80cd292 - std::sys::backtrace::_print_fmt::h744638bebbff2806 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/sys/backtrace.rs:66:9 [INFO] [stderr] 3: 0x6349c80cd292 - ::fmt::he6e74fa9d0076b5d [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/sys/backtrace.rs:39:26 [INFO] [stderr] 4: 0x6349c80eead3 - core::fmt::rt::Argument::fmt::hf88a3177e76af877 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/core/src/fmt/rt.rs:173:76 [INFO] [stderr] 5: 0x6349c80eead3 - core::fmt::write::h6442196e41589522 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/core/src/fmt/mod.rs:1446:25 [INFO] [stderr] 6: 0x6349c80ca1f3 - std::io::default_write_fmt::hcc7659f8be9b70b5 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/io/mod.rs:639:11 [INFO] [stderr] 7: 0x6349c80ca1f3 - std::io::Write::write_fmt::hdd01b95af54f8b44 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/io/mod.rs:1914:13 [INFO] [stderr] 8: 0x6349c80cd0e2 - std::sys::backtrace::BacktraceLock::print::h25e1ce4c29150054 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/sys/backtrace.rs:42:9 [INFO] [stderr] 9: 0x6349c80ce522 - std::panicking::default_hook::{{closure}}::h36663bdaae83f2bb [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/panicking.rs:300:22 [INFO] [stderr] 10: 0x6349c80ce325 - std::panicking::default_hook::hb9d7c40580cf1835 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/panicking.rs:327:9 [INFO] [stderr] 11: 0x6349c80cef42 - std::panicking::rust_panic_with_hook::h2d703857e4ba629f [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/panicking.rs:833:13 [INFO] [stderr] 12: 0x6349c80cecca - std::panicking::begin_panic_handler::{{closure}}::h53dd12a17ad784b1 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/panicking.rs:706:13 [INFO] [stderr] 13: 0x6349c80cd799 - std::sys::backtrace::__rust_end_short_backtrace::hf54a874920d38937 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/sys/backtrace.rs:168:18 [INFO] [stderr] 14: 0x6349c80ce95d - __rustc[22d03d94d4da23d0]::rust_begin_unwind [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/panicking.rs:697:5 [INFO] [stderr] 15: 0x6349c80eda00 - core::panicking::panic_fmt::hb74c170c8276d1d6 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/core/src/panicking.rs:75:14 [INFO] [stderr] 16: 0x6349c8063d0b - cmake::fail::hb678dee035895d1f [INFO] [stderr] 17: 0x6349c80635aa - cmake::run::h412b8131fce90db8 [INFO] [stderr] 18: 0x6349c8060121 - cmake::Config::build::h7e9f277e461086f6 [INFO] [stderr] 19: 0x6349c804eeb8 - build_script_build::build_chemfiles::hff76946401cf0364 [INFO] [stderr] 20: 0x6349c804e2c3 - build_script_build::main::h2cc2388735f63e9f [INFO] [stderr] 21: 0x6349c804c6d3 - core::ops::function::FnOnce::call_once::hde7a7f12d0bda7cf [INFO] [stderr] 22: 0x6349c804c5c6 - std::sys::backtrace::__rust_begin_short_backtrace::h2a65dca9a740f03c [INFO] [stderr] 23: 0x6349c804c549 - std::rt::lang_start::{{closure}}::hab493683247c2317 [INFO] [stderr] 24: 0x6349c80c5334 - core::ops::function::impls:: for &F>::call_once::hc4394f720a441605 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/core/src/ops/function.rs:284:13 [INFO] [stderr] 25: 0x6349c80c5334 - std::panicking::try::do_call::hcfbf653ae9dff9d3 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/panicking.rs:589:40 [INFO] [stderr] 26: 0x6349c80c5334 - std::panicking::try::h282e00ddfab06dd3 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/panicking.rs:552:19 [INFO] [stderr] 27: 0x6349c80c5334 - std::panic::catch_unwind::h1a4f7c5f603feec0 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/panic.rs:359:14 [INFO] [stderr] 28: 0x6349c80c5334 - std::rt::lang_start_internal::{{closure}}::h74ae7472f42599f3 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/rt.rs:168:24 [INFO] [stderr] 29: 0x6349c80c5334 - std::panicking::try::do_call::ha8c33ea9dc720bf4 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/panicking.rs:589:40 [INFO] [stderr] 30: 0x6349c80c5334 - std::panicking::try::h445539db8a61fee5 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/panicking.rs:552:19 [INFO] [stderr] 31: 0x6349c80c5334 - std::panic::catch_unwind::ha832476451864184 [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/panic.rs:359:14 [INFO] [stderr] 32: 0x6349c80c5334 - std::rt::lang_start_internal::h2cddb2630d6593cf [INFO] [stderr] at /rustc/17092ad00ed8fe1e7f81a7e38238ff70779034b1/library/std/src/rt.rs:164:5 [INFO] [stderr] 33: 0x6349c804c531 - std::rt::lang_start::hde67bc8f8ca87b2c [INFO] [stderr] 34: 0x6349c804f935 - main [INFO] [stderr] 35: 0x70899bf3f1ca - [INFO] [stderr] 36: 0x70899bf3f28b - __libc_start_main [INFO] [stderr] 37: 0x6349c804c365 - _start [INFO] [stderr] 38: 0x0 - [INFO] running `Command { std: "docker" "inspect" "5c3f89d26990abadb5a1eee23196175c46932c046fdeac6146d6414efba28342", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5c3f89d26990abadb5a1eee23196175c46932c046fdeac6146d6414efba28342", kill_on_drop: false }` [INFO] [stdout] 5c3f89d26990abadb5a1eee23196175c46932c046fdeac6146d6414efba28342