[INFO] cloning repository https://github.com/ban-m/partial_order_alignment
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/ban-m/partial_order_alignment" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fban-m%2Fpartial_order_alignment", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fban-m%2Fpartial_order_alignment'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b434418447aad843e9267f616a0b609d2da4c38a
[INFO] testing ban-m/partial_order_alignment/b434418447aad843e9267f616a0b609d2da4c38a against master#414482f6a0d4e7290f614300581a0b55442552a3 for pr-140985
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fban-m%2Fpartial_order_alignment" "/workspace/builds/worker-4-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/ban-m/partial_order_alignment on toolchain 414482f6a0d4e7290f614300581a0b55442552a3
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+414482f6a0d4e7290f614300581a0b55442552a3" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/ban-m/partial_order_alignment
[INFO] finished tweaking git repo https://github.com/ban-m/partial_order_alignment
[INFO] tweaked toml for git repo https://github.com/ban-m/partial_order_alignment written to /workspace/builds/worker-4-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+414482f6a0d4e7290f614300581a0b55442552a3" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 24 packages to latest compatible versions
[INFO] [stderr]       Adding rand v0.8.5 (available: v0.9.1)
[INFO] [stderr]       Adding rand_xoshiro v0.6.0 (available: v0.7.0)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+414482f6a0d4e7290f614300581a0b55442552a3" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eea15d5475069c3ef791f10c2c6b5af2ee421ef2da1e680ecce1cba46243983b" "/opt/rustwide/cargo-home/bin/cargo" "+414482f6a0d4e7290f614300581a0b55442552a3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 182b07ce71a222db61119148fe0eab5814adefb22017d776c313405aff323cc5
[INFO] running `Command { std: "docker" "start" "-a" "182b07ce71a222db61119148fe0eab5814adefb22017d776c313405aff323cc5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "182b07ce71a222db61119148fe0eab5814adefb22017d776c313405aff323cc5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "182b07ce71a222db61119148fe0eab5814adefb22017d776c313405aff323cc5", kill_on_drop: false }`
[INFO] [stdout] 182b07ce71a222db61119148fe0eab5814adefb22017d776c313405aff323cc5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eea15d5475069c3ef791f10c2c6b5af2ee421ef2da1e680ecce1cba46243983b" "/opt/rustwide/cargo-home/bin/cargo" "+414482f6a0d4e7290f614300581a0b55442552a3" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 84a2a339503f3a86ce37bb75ebaa96aa46d4ed38bb9d47c434d14f0a4dc10258
[INFO] running `Command { std: "docker" "start" "-a" "84a2a339503f3a86ce37bb75ebaa96aa46d4ed38bb9d47c434d14f0a4dc10258", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.172
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling zerocopy v0.8.25
[INFO] [stderr]    Compiling log v0.4.27
[INFO] [stderr]    Compiling getrandom v0.2.16
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling rand_xoshiro v0.6.0
[INFO] [stderr]    Compiling ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling poa_hmm v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 7.99s
[INFO] running `Command { std: "docker" "inspect" "84a2a339503f3a86ce37bb75ebaa96aa46d4ed38bb9d47c434d14f0a4dc10258", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "84a2a339503f3a86ce37bb75ebaa96aa46d4ed38bb9d47c434d14f0a4dc10258", kill_on_drop: false }`
[INFO] [stdout] 84a2a339503f3a86ce37bb75ebaa96aa46d4ed38bb9d47c434d14f0a4dc10258
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eea15d5475069c3ef791f10c2c6b5af2ee421ef2da1e680ecce1cba46243983b" "/opt/rustwide/cargo-home/bin/cargo" "+414482f6a0d4e7290f614300581a0b55442552a3" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3bbffc1431093d0ff427b1a9a54879f73cabb708d1859e7f3f0c4eda87364472
[INFO] running `Command { std: "docker" "start" "-a" "3bbffc1431093d0ff427b1a9a54879f73cabb708d1859e7f3f0c4eda87364472", kill_on_drop: false }`
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]    Compiling rayon-core v1.12.1
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.18
[INFO] [stderr]    Compiling crossbeam-deque v0.8.6
[INFO] [stderr]    Compiling rayon v1.10.0
[INFO] [stderr]    Compiling poa_hmm v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 9.90s
[INFO] running `Command { std: "docker" "inspect" "3bbffc1431093d0ff427b1a9a54879f73cabb708d1859e7f3f0c4eda87364472", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3bbffc1431093d0ff427b1a9a54879f73cabb708d1859e7f3f0c4eda87364472", kill_on_drop: false }`
[INFO] [stdout] 3bbffc1431093d0ff427b1a9a54879f73cabb708d1859e7f3f0c4eda87364472
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:eea15d5475069c3ef791f10c2c6b5af2ee421ef2da1e680ecce1cba46243983b" "/opt/rustwide/cargo-home/bin/cargo" "+414482f6a0d4e7290f614300581a0b55442552a3" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 0ddaa09ebd943ec79b893ba779b4a5a749dd8166b43a492b45219d1dd8e1c892
[INFO] running `Command { std: "docker" "start" "-a" "0ddaa09ebd943ec79b893ba779b4a5a749dd8166b43a492b45219d1dd8e1c892", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.04s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/poa_hmm-030f4c4a9619a244)
[INFO] [stdout] 
[INFO] [stdout] running 32 tests
[INFO] [stdout] test base_table::tests::test ... ok
[INFO] [stdout] test tests::tests::abundance_test_prior ... ignored
[INFO] [stdout] test tests::tests::add ... ok
[INFO] [stdout] test generate::tests::short_consensus ... ok
[INFO] [stdout] test tests::tests::deletion_test ... ok
[INFO] [stdout] test tests::tests::deletion_test_banded ... ok
[INFO] [stdout] test tests::tests::create ... ok
[INFO] [stdout] test tests::tests::forward ... ok
[INFO] [stdout] test generate::tests::long_consensus ... ok
[INFO] [stdout] test tests::tests::forward_check ... ok
[INFO] [stdout] test tests::tests::init ... ok
[INFO] [stdout] test tests::tests::initialize ... ok
[INFO] [stdout] test tests::tests::insertion_test ... ok
[INFO] [stdout] test tests::tests::insertion_test_banded ... ok
[INFO] [stdout] test tests::tests::it_works ... ok
[INFO] [stdout] test tests::tests::connectivity_check ... ok
[INFO] [stdout] test tests::tests::low_coverage_test ... ok
[INFO] [stdout] test tests::tests::merge_test ... ok
[INFO] [stdout] test tests::tests::mismatch_test ... ok
[INFO] [stdout] test tests::tests::mismatch_test_banded ... ok
[INFO] [stdout] test generate::tests::short_consensus_rand ... ok
[INFO] [stdout] test tests::tests::alignment_check ... ok
[INFO] [stdout] test tests::tests::single_error_banded_test ... ignored
[INFO] [stdout] test tests::tests::single_error_ccs_test ... ignored
[INFO] [stdout] test tests::tests::single_error_test ... ignored
[INFO] [stdout] test tests::tests::hard_test ... ok
[INFO] [stdout] test tests::tests::random_check ... ok
[INFO] [stdout] test tests::tests::high_coverage_test ... ok
[INFO] [stdout] test generate::tests::long_consensus_rand has been running for over 60 seconds
[INFO] [stdout] test generate::tests::super_long_consensus_rand has been running for over 60 seconds
[INFO] [stdout] test tests::tests::mix_test_prior has been running for over 60 seconds
[INFO] [stdout] test tests::tests::random_check_forward has been running for over 60 seconds
[INFO] [stdout] test tests::tests::mix_test_prior ... ok
[INFO] [stdout] test tests::tests::random_check_forward ... ok
[INFO] [stdout] test generate::tests::long_consensus_rand ... ok
[ERROR] error running command: no output for 300 seconds
[INFO] running `Command { std: "docker" "inspect" "0ddaa09ebd943ec79b893ba779b4a5a749dd8166b43a492b45219d1dd8e1c892", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0ddaa09ebd943ec79b893ba779b4a5a749dd8166b43a492b45219d1dd8e1c892", kill_on_drop: false }`
[INFO] [stdout] 0ddaa09ebd943ec79b893ba779b4a5a749dd8166b43a492b45219d1dd8e1c892