[INFO] cloning repository https://github.com/ze97286/genome-k-meriser
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/ze97286/genome-k-meriser" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fze97286%2Fgenome-k-meriser", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fze97286%2Fgenome-k-meriser'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 86ecbb12d62ad9bc0a2dbfabef0fd97b7b2571f8
[INFO] checking ze97286/genome-k-meriser against master#3350c1eb3fd8fe1bee1ed4c76944d707bd256876 for pr-140558
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fze97286%2Fgenome-k-meriser" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/ze97286/genome-k-meriser on toolchain 3350c1eb3fd8fe1bee1ed4c76944d707bd256876
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3350c1eb3fd8fe1bee1ed4c76944d707bd256876" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/ze97286/genome-k-meriser
[INFO] finished tweaking git repo https://github.com/ze97286/genome-k-meriser
[INFO] tweaked toml for git repo https://github.com/ze97286/genome-k-meriser written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/ze97286/genome-k-meriser already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3350c1eb3fd8fe1bee1ed4c76944d707bd256876" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded bio-types v1.0.3
[INFO] [stderr]   Downloaded rust-htslib v0.42.0
[INFO] [stderr]   Downloaded hts-sys v2.1.4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0b074c097205a61b89e8ad263052f976b2b332c4dc5f02aef1fe52501660d6e" "/opt/rustwide/cargo-home/bin/cargo" "+3350c1eb3fd8fe1bee1ed4c76944d707bd256876" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] dd5573230b51a138385a83b877bff45ebe281cf67fc1c638062be7c1529623d6
[INFO] running `Command { std: "docker" "start" "-a" "dd5573230b51a138385a83b877bff45ebe281cf67fc1c638062be7c1529623d6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "dd5573230b51a138385a83b877bff45ebe281cf67fc1c638062be7c1529623d6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "dd5573230b51a138385a83b877bff45ebe281cf67fc1c638062be7c1529623d6", kill_on_drop: false }`
[INFO] [stdout] dd5573230b51a138385a83b877bff45ebe281cf67fc1c638062be7c1529623d6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0b074c097205a61b89e8ad263052f976b2b332c4dc5f02aef1fe52501660d6e" "/opt/rustwide/cargo-home/bin/cargo" "+3350c1eb3fd8fe1bee1ed4c76944d707bd256876" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 09648236bfbbb5b29620ae372ba746d3cad213f341a66df53e27fdb3f21f5f70
[INFO] running `Command { std: "docker" "start" "-a" "09648236bfbbb5b29620ae372ba746d3cad213f341a66df53e27fdb3f21f5f70", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.155
[INFO] [stderr]    Compiling pkg-config v0.3.30
[INFO] [stderr]    Compiling version_check v0.9.5
[INFO] [stderr]    Compiling typenum v1.17.0
[INFO] [stderr]    Compiling proc-macro2 v1.0.86
[INFO] [stderr]    Compiling vcpkg v0.2.15
[INFO] [stderr]    Compiling unicode-ident v1.0.12
[INFO] [stderr]     Checking subtle v2.6.1
[INFO] [stderr]     Checking memchr v2.7.4
[INFO] [stderr]     Checking regex-syntax v0.8.4
[INFO] [stderr]    Compiling crossbeam-utils v0.8.20
[INFO] [stderr]    Compiling rustversion v1.0.17
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]     Checking cpufeatures v0.2.12
[INFO] [stderr]     Checking tinyvec_macros v0.1.1
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking tinyvec v1.8.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling thiserror v1.0.63
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling zstd-safe v5.0.2+zstd.1.5.2
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking percent-encoding v2.3.1
[INFO] [stderr]     Checking powerfmt v0.2.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling generic-array v0.14.7
[INFO] [stderr]     Checking base64ct v1.6.0
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]     Checking unicode-bidi v0.3.15
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]     Checking utf8parse v0.2.2
[INFO] [stderr]    Compiling rayon-core v1.12.1
[INFO] [stderr]     Checking adler v1.0.2
[INFO] [stderr]     Checking password-hash v0.4.2
[INFO] [stderr]     Checking crossbeam-epoch v0.9.18
[INFO] [stderr]     Checking anstyle-parse v0.2.5
[INFO] [stderr]     Checking miniz_oxide v0.7.4
[INFO] [stderr]    Compiling quote v1.0.36
[INFO] [stderr]     Checking deranged v0.3.11
[INFO] [stderr]     Checking unicode-normalization v0.1.23
[INFO] [stderr]     Checking form_urlencoded v1.2.1
[INFO] [stderr]     Checking crc32fast v1.4.2
[INFO] [stderr]     Checking lazy_static v1.5.0
[INFO] [stderr]     Checking anstyle-query v1.1.1
[INFO] [stderr]     Checking log v0.4.22
[INFO] [stderr]     Checking time-core v0.1.2
[INFO] [stderr]     Checking anstyle v1.0.8
[INFO] [stderr]     Checking is_terminal_polyfill v1.70.1
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]     Checking colorchoice v1.0.2
[INFO] [stderr]     Checking num-conv v0.1.0
[INFO] [stderr]     Checking crossbeam-deque v0.8.5
[INFO] [stderr]     Checking flate2 v1.0.31
[INFO] [stderr]     Checking constant_time_eq v0.1.5
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking anstream v0.6.15
[INFO] [stderr]     Checking humantime v2.1.0
[INFO] [stderr]     Checking idna v0.5.0
[INFO] [stderr]    Compiling jobserver v0.1.32
[INFO] [stderr]    Compiling syn v2.0.72
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking either v1.13.0
[INFO] [stderr]    Compiling cc v1.1.7
[INFO] [stderr]     Checking url v2.5.2
[INFO] [stderr]     Checking regex-automata v0.4.7
[INFO] [stderr]     Checking crypto-common v0.1.6
[INFO] [stderr]     Checking block-buffer v0.10.4
[INFO] [stderr]     Checking inout v0.1.3
[INFO] [stderr]     Checking digest v0.10.7
[INFO] [stderr]     Checking cipher v0.4.4
[INFO] [stderr]     Checking time v0.3.36
[INFO] [stderr]     Checking sha2 v0.10.8
[INFO] [stderr]     Checking hmac v0.12.1
[INFO] [stderr]     Checking sha1 v0.10.6
[INFO] [stderr]     Checking rayon v1.10.0
[INFO] [stderr]     Checking aes v0.8.4
[INFO] [stderr]     Checking pbkdf2 v0.11.0
[INFO] [stderr]    Compiling cmake v0.1.50
[INFO] [stderr]    Compiling openssl-src v300.3.1+3.3.1
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling zstd-sys v2.0.13+zstd.1.5.6
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling curl-sys v0.4.74+curl-8.9.0
[INFO] [stderr]    Compiling hts-sys v2.1.4
[INFO] [stderr]    Compiling openssl-sys v0.9.103
[INFO] [stderr]    Compiling libz-sys v1.1.18
[INFO] [stderr]     Checking bzip2 v0.4.4
[INFO] [stderr]    Compiling thiserror-impl v1.0.63
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]     Checking regex v1.10.6
[INFO] [stderr]     Checking env_filter v0.1.2
[INFO] [stderr]     Checking env_logger v0.11.5
[INFO] [stderr]     Checking bio-types v1.0.3
[INFO] [stderr]     Checking zstd v0.11.2+zstd.1.5.2
[INFO] [stderr]     Checking zip v0.6.6
[INFO] [stderr]     Checking rust-htslib v0.42.0
[INFO] [stderr]     Checking kmerise v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 49s
[INFO] running `Command { std: "docker" "inspect" "09648236bfbbb5b29620ae372ba746d3cad213f341a66df53e27fdb3f21f5f70", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "09648236bfbbb5b29620ae372ba746d3cad213f341a66df53e27fdb3f21f5f70", kill_on_drop: false }`
[INFO] [stdout] 09648236bfbbb5b29620ae372ba746d3cad213f341a66df53e27fdb3f21f5f70
