[INFO] cloning repository https://github.com/marcelm/rstrobes [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/marcelm/rstrobes" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmarcelm%2Frstrobes", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmarcelm%2Frstrobes'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] eb15a5ce050c370b2b7262a22b8a93d8cd613496 [INFO] checking marcelm/rstrobes against try#44e31dee3cf6f37b4f652572897bb0eb25c477ee for pr-139763 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmarcelm%2Frstrobes" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/marcelm/rstrobes on toolchain 44e31dee3cf6f37b4f652572897bb0eb25c477ee [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+44e31dee3cf6f37b4f652572897bb0eb25c477ee" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/marcelm/rstrobes [INFO] finished tweaking git repo https://github.com/marcelm/rstrobes [INFO] tweaked toml for git repo https://github.com/marcelm/rstrobes written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/marcelm/rstrobes already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+44e31dee3cf6f37b4f652572897bb0eb25c477ee" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [ERROR] error running command: no output for 300 seconds [INFO] checking marcelm/rstrobes against try#44e31dee3cf6f37b4f652572897bb0eb25c477ee for pr-139763 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmarcelm%2Frstrobes" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/marcelm/rstrobes on toolchain 44e31dee3cf6f37b4f652572897bb0eb25c477ee [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+44e31dee3cf6f37b4f652572897bb0eb25c477ee" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/marcelm/rstrobes [INFO] finished tweaking git repo https://github.com/marcelm/rstrobes [INFO] tweaked toml for git repo https://github.com/marcelm/rstrobes written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/marcelm/rstrobes already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+44e31dee3cf6f37b4f652572897bb0eb25c477ee" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [ERROR] error running command: no output for 300 seconds [INFO] checking marcelm/rstrobes against try#44e31dee3cf6f37b4f652572897bb0eb25c477ee for pr-139763 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmarcelm%2Frstrobes" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/marcelm/rstrobes on toolchain 44e31dee3cf6f37b4f652572897bb0eb25c477ee [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+44e31dee3cf6f37b4f652572897bb0eb25c477ee" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/marcelm/rstrobes [INFO] finished tweaking git repo https://github.com/marcelm/rstrobes [INFO] tweaked toml for git repo https://github.com/marcelm/rstrobes written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/marcelm/rstrobes already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+44e31dee3cf6f37b4f652572897bb0eb25c477ee" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [ERROR] error running command: no output for 300 seconds [INFO] checking marcelm/rstrobes against try#44e31dee3cf6f37b4f652572897bb0eb25c477ee for pr-139763 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmarcelm%2Frstrobes" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/marcelm/rstrobes on toolchain 44e31dee3cf6f37b4f652572897bb0eb25c477ee [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+44e31dee3cf6f37b4f652572897bb0eb25c477ee" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/marcelm/rstrobes [INFO] finished tweaking git repo https://github.com/marcelm/rstrobes [INFO] tweaked toml for git repo https://github.com/marcelm/rstrobes written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/marcelm/rstrobes already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+44e31dee3cf6f37b4f652572897bb0eb25c477ee" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded temp-file v0.1.9 [INFO] [stderr] Downloaded pyo3-macros-backend v0.21.0-beta.0 [INFO] [stderr] Downloaded sigpipe v0.1.3 [INFO] [stderr] Downloaded pyo3-macros v0.21.0-beta.0 [INFO] [stderr] Downloaded pyo3-build-config v0.21.0-beta.0 [INFO] [stderr] Downloaded pyo3-ffi v0.21.0-beta.0 [INFO] [stderr] Downloaded pyo3 v0.21.0-beta.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0b074c097205a61b89e8ad263052f976b2b332c4dc5f02aef1fe52501660d6e" "/opt/rustwide/cargo-home/bin/cargo" "+44e31dee3cf6f37b4f652572897bb0eb25c477ee" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] c7c894379d82629f09087f75781500cb81323915ca846051ff01bb59f552ab50 [INFO] running `Command { std: "docker" "start" "-a" "c7c894379d82629f09087f75781500cb81323915ca846051ff01bb59f552ab50", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c7c894379d82629f09087f75781500cb81323915ca846051ff01bb59f552ab50", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c7c894379d82629f09087f75781500cb81323915ca846051ff01bb59f552ab50", kill_on_drop: false }` [INFO] [stdout] c7c894379d82629f09087f75781500cb81323915ca846051ff01bb59f552ab50 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0b074c097205a61b89e8ad263052f976b2b332c4dc5f02aef1fe52501660d6e" "/opt/rustwide/cargo-home/bin/cargo" "+44e31dee3cf6f37b4f652572897bb0eb25c477ee" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] b14d026bc978c97a76d06b532728e5881708e1b28c9badb816d0b6fee05086fe [INFO] running `Command { std: "docker" "start" "-a" "b14d026bc978c97a76d06b532728e5881708e1b28c9badb816d0b6fee05086fe", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Compiling proc-macro2 v1.0.93 [INFO] [stderr] Compiling unicode-ident v1.0.12 [INFO] [stderr] Compiling libc v0.2.169 [INFO] [stderr] Compiling target-lexicon v0.12.14 [INFO] [stderr] Checking memchr v2.7.1 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Checking anstyle v1.0.10 [INFO] [stderr] Checking utf8parse v0.2.1 [INFO] [stderr] Compiling once_cell v1.19.0 [INFO] [stderr] Checking anstyle-parse v0.2.3 [INFO] [stderr] Checking colorchoice v1.0.0 [INFO] [stderr] Checking anstyle-query v1.0.2 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Checking clap_lex v0.7.4 [INFO] [stderr] Checking anstream v0.6.11 [INFO] [stderr] Checking adler2 v2.0.0 [INFO] [stderr] Checking strsim v0.11.1 [INFO] [stderr] Compiling thiserror v2.0.11 [INFO] [stderr] Checking miniz_oxide v0.8.0 [INFO] [stderr] Checking clap_builder v4.5.27 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Compiling quote v1.0.35 [INFO] [stderr] Compiling pyo3-build-config v0.21.0-beta.0 [INFO] [stderr] Compiling syn v2.0.98 [INFO] [stderr] Compiling cc v1.0.83 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Checking crc32fast v1.4.2 [INFO] [stderr] Checking regex-syntax v0.8.5 [INFO] [stderr] Checking byteorder v1.5.0 [INFO] [stderr] Checking flate2 v1.0.34 [INFO] [stderr] Checking sigpipe v0.1.3 [INFO] [stderr] Checking fastrand v2.3.0 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking xxhash-rust v0.8.8 [INFO] [stderr] Checking log v0.4.20 [INFO] [stderr] Compiling lock_api v0.4.11 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Checking predicates-core v1.0.9 [INFO] [stderr] Compiling parking_lot_core v0.9.9 [INFO] [stderr] Compiling memoffset v0.9.0 [INFO] [stderr] Checking termtree v0.5.1 [INFO] [stderr] Compiling portable-atomic v1.6.0 [INFO] [stderr] Compiling rstrobes v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Compiling heck v0.4.1 [INFO] [stderr] Checking float-cmp v0.10.0 [INFO] [stderr] Checking scopeguard v1.2.0 [INFO] [stderr] Checking normalize-line-endings v0.3.0 [INFO] [stderr] Checking smallvec v1.13.1 [INFO] [stderr] Compiling assert_cmd v2.0.16 [INFO] [stderr] Checking difflib v0.4.0 [INFO] [stderr] Checking predicates-tree v1.0.12 [INFO] [stderr] Checking wait-timeout v0.2.1 [INFO] [stderr] Compiling pyo3-ffi v0.21.0-beta.0 [INFO] [stderr] Compiling pyo3 v0.21.0-beta.0 [INFO] [stderr] Checking temp-file v0.1.9 [INFO] [stderr] Checking parking_lot v0.12.1 [INFO] [stderr] Checking unindent v0.2.3 [INFO] [stderr] Compiling indoc v2.0.4 [INFO] [stderr] Checking regex-automata v0.4.9 [INFO] [stderr] Compiling pyo3-macros-backend v0.21.0-beta.0 [INFO] [stderr] Compiling clap_derive v4.5.28 [INFO] [stderr] Compiling thiserror-impl v2.0.11 [INFO] [stderr] Checking regex v1.11.1 [INFO] [stderr] Checking bstr v1.11.3 [INFO] [stderr] Checking predicates v3.1.3 [INFO] [stderr] Checking clap v4.5.28 [INFO] [stdout] warning: unused variable: `score` [INFO] [stdout] --> src/aligner.rs:254:26 [INFO] [stdout] | [INFO] [stdout] 254 | let (start, end, score) = highest_scoring_segment(b"", b"", 5, 7, 0); [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_score` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `score` [INFO] [stdout] --> src/aligner.rs:258:26 [INFO] [stdout] | [INFO] [stdout] 258 | let (start, end, score) = highest_scoring_segment(b"AAAAAAAAAA", b"AAAAAATTTT", 5, 7, 0); [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_score` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `score` [INFO] [stdout] --> src/aligner.rs:261:26 [INFO] [stdout] | [INFO] [stdout] 261 | let (start, end, score) = highest_scoring_segment(b"AAAAAAAAAA", b"TTTTAAAAAA", 5, 7, 0); [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_score` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `test_index_parameters_similar_read_length` is never used [INFO] [stdout] --> src/index.rs:743:8 [INFO] [stdout] | [INFO] [stdout] 743 | fn test_index_parameters_similar_read_length() { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling pyo3-macros v0.21.0-beta.0 [INFO] [stdout] warning: method `output_abundances` is never used [INFO] [stdout] --> src/main.rs:507:12 [INFO] [stdout] | [INFO] [stdout] 452 | impl<'a> Mapper<'a> { [INFO] [stdout] | ------------------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 507 | pub fn output_abundances(&self, out: &mut T) -> io::Result<()> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `output_abundances` is never used [INFO] [stdout] --> src/main.rs:507:12 [INFO] [stdout] | [INFO] [stdout] 452 | impl<'a> Mapper<'a> { [INFO] [stdout] | ------------------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 507 | pub fn output_abundances(&self, out: &mut T) -> io::Result<()> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Checking py-rstrobes v0.0.0 (/opt/rustwide/workdir/python) [INFO] [stdout] warning: unused imports: `BufRead` and `Error` [INFO] [stdout] --> python/src/lib.rs:2:15 [INFO] [stdout] | [INFO] [stdout] 2 | use std::io::{BufRead, BufReader, Error}; [INFO] [stdout] | ^^^^^^^ ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Instant` [INFO] [stdout] --> python/src/lib.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::time::Instant; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `pyo3::types::PyString` [INFO] [stdout] --> python/src/lib.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use pyo3::types::PyString; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `Error` [INFO] [stdout] --> python/src/lib.rs:2:15 [INFO] [stdout] | [INFO] [stdout] 2 | use std::io::{BufRead, BufReader, Error}; [INFO] [stdout] | ^^^^^^^ ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Instant` [INFO] [stdout] --> python/src/lib.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::time::Instant; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `pyo3::types::PyString` [INFO] [stdout] --> python/src/lib.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use pyo3::types::PyString; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `refseq` is never read [INFO] [stdout] --> python/src/lib.rs:11:5 [INFO] [stdout] | [INFO] [stdout] 10 | struct PyRefSequence { [INFO] [stdout] | ------------- field in this struct [INFO] [stdout] 11 | refseq: RefSequence, [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `refseq` is never read [INFO] [stdout] --> python/src/lib.rs:11:5 [INFO] [stdout] | [INFO] [stdout] 10 | struct PyRefSequence { [INFO] [stdout] | ------------- field in this struct [INFO] [stdout] 11 | refseq: RefSequence, [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [optimized + debuginfo] target(s) in 7.92s [INFO] running `Command { std: "docker" "inspect" "b14d026bc978c97a76d06b532728e5881708e1b28c9badb816d0b6fee05086fe", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b14d026bc978c97a76d06b532728e5881708e1b28c9badb816d0b6fee05086fe", kill_on_drop: false }` [INFO] [stdout] b14d026bc978c97a76d06b532728e5881708e1b28c9badb816d0b6fee05086fe