[INFO] cloning repository https://github.com/bluenote-1577/vartig-utils [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/bluenote-1577/vartig-utils" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fvartig-utils", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fvartig-utils'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] d85485ae18c17ca3aafb37502f2bb81c9d04bea5 [INFO] checking bluenote-1577/vartig-utils against try#b8ee37b59c6e1f39bae18b85e057975ab0d89308 for pr-139587-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fvartig-utils" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file src/x [INFO] [stderr] error: unable to write file track_vartigs.py [INFO] [stderr] error: unable to write file visualize-vartig-example.png [INFO] [stderr] error: unable to write file visualize_haplotigs_cut.py [INFO] [stderr] error: unable to write file visualize_vartigs.py [INFO] [stderr] fatal: unable to checkout working tree [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] checking bluenote-1577/vartig-utils against try#b8ee37b59c6e1f39bae18b85e057975ab0d89308 for pr-139587-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fvartig-utils" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file src/x [INFO] [stderr] error: unable to write file track_vartigs.py [INFO] [stderr] error: unable to write file visualize-vartig-example.png [INFO] [stderr] error: unable to write file visualize_haplotigs_cut.py [INFO] [stderr] error: unable to write file visualize_vartigs.py [INFO] [stderr] fatal: unable to checkout working tree [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] checking bluenote-1577/vartig-utils against try#b8ee37b59c6e1f39bae18b85e057975ab0d89308 for pr-139587-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fvartig-utils" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file src/x [INFO] [stderr] error: unable to write file track_vartigs.py [INFO] [stderr] error: unable to write file visualize-vartig-example.png [INFO] [stderr] error: unable to write file visualize_haplotigs_cut.py [INFO] [stderr] error: unable to write file visualize_vartigs.py [INFO] [stderr] fatal: unable to checkout working tree [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] checking bluenote-1577/vartig-utils against try#b8ee37b59c6e1f39bae18b85e057975ab0d89308 for pr-139587-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fvartig-utils" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file src/x [INFO] [stderr] error: unable to write file track_vartigs.py [INFO] [stderr] error: unable to write file visualize-vartig-example.png [INFO] [stderr] error: unable to write file visualize_vartigs.py [INFO] [stderr] fatal: unable to checkout working tree [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] checking bluenote-1577/vartig-utils against try#b8ee37b59c6e1f39bae18b85e057975ab0d89308 for pr-139587-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fvartig-utils" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file src/x [INFO] [stderr] error: unable to write file track_vartigs.py [INFO] [stderr] error: unable to write file visualize-vartig-example.png [INFO] [stderr] error: unable to write file visualize_haplotigs_cut.py [INFO] [stderr] error: unable to write file visualize_vartigs.py [INFO] [stderr] fatal: unable to checkout working tree [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] failed to checkout https://github.com/bluenote-1577/vartig-utils Caused by: command failed: exit status: 128