[INFO] cloning repository https://github.com/bluenote-1577/vartig-utils
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/bluenote-1577/vartig-utils" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fvartig-utils", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fvartig-utils'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] d85485ae18c17ca3aafb37502f2bb81c9d04bea5
[INFO] checking bluenote-1577/vartig-utils against master#bca37a20bd376ce3fd138e7cdee7fe704e0f8814 for pr-139493-3
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fvartig-utils" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/bluenote-1577/vartig-utils
[INFO] finished tweaking git repo https://github.com/bluenote-1577/vartig-utils
[INFO] tweaked toml for git repo https://github.com/bluenote-1577/vartig-utils written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/bluenote-1577/vartig-utils on toolchain bca37a20bd376ce3fd138e7cdee7fe704e0f8814
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+bca37a20bd376ce3fd138e7cdee7fe704e0f8814" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/bluenote-1577/vartig-utils already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+bca37a20bd376ce3fd138e7cdee7fe704e0f8814" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+bca37a20bd376ce3fd138e7cdee7fe704e0f8814" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 99c368cb45a0ae967fedf6e550848f43913186d55f6afa05fe18c4caf829619f
[INFO] running `Command { std: "docker" "start" "-a" "99c368cb45a0ae967fedf6e550848f43913186d55f6afa05fe18c4caf829619f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "99c368cb45a0ae967fedf6e550848f43913186d55f6afa05fe18c4caf829619f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "99c368cb45a0ae967fedf6e550848f43913186d55f6afa05fe18c4caf829619f", kill_on_drop: false }`
[INFO] [stdout] 99c368cb45a0ae967fedf6e550848f43913186d55f6afa05fe18c4caf829619f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+bca37a20bd376ce3fd138e7cdee7fe704e0f8814" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e9c6b04ef25efdc1e425a238e4f8aa158bb40c95e6f27ac909e2d16035ee7a8e
[INFO] running `Command { std: "docker" "start" "-a" "e9c6b04ef25efdc1e425a238e4f8aa158bb40c95e6f27ac909e2d16035ee7a8e", kill_on_drop: false }`
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[INFO] [stdout] warning: unused imports: `Hash` and `Hasher`
[INFO] [stdout]  --> src/vartig.rs:4:17
[INFO] [stdout]   |
[INFO] [stdout] 4 | use std::hash::{Hash, Hasher};
[INFO] [stdout]   |                 ^^^^  ^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `Hash` and `Hasher`
[INFO] [stdout]  --> src/vartig.rs:4:17
[INFO] [stdout]   |
[INFO] [stdout] 4 | use std::hash::{Hash, Hasher};
[INFO] [stdout]   |                 ^^^^  ^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `other_vcf_snppos_to_pos` is assigned to, but never used
[INFO] [stdout]   --> src/vartig.rs:76:9
[INFO] [stdout]    |
[INFO] [stdout] 76 |     let other_vcf_snppos_to_pos;
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: consider using `_other_vcf_snppos_to_pos` instead
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: value assigned to `other_vcf_snppos_to_pos` is never read
[INFO] [stdout]   --> src/vartig.rs:83:9
[INFO] [stdout]    |
[INFO] [stdout] 83 |         other_vcf_snppos_to_pos = HashMap::default();
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: maybe it is overwritten before being read?
[INFO] [stdout]    = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: value assigned to `other_vcf_snppos_to_pos` is never read
[INFO] [stdout]   --> src/vartig.rs:79:38
[INFO] [stdout]    |
[INFO] [stdout] 79 |         (other_vcf_snppos_to_allele, other_vcf_snppos_to_pos) = get_vcf_profile(other_vcf.unwrap())
[INFO] [stdout]    |                                      ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: maybe it is overwritten before being read?
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `other_vcf_snppos_to_pos` is assigned to, but never used
[INFO] [stdout]   --> src/vartig.rs:76:9
[INFO] [stdout]    |
[INFO] [stdout] 76 |     let other_vcf_snppos_to_pos;
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: consider using `_other_vcf_snppos_to_pos` instead
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: value assigned to `other_vcf_snppos_to_pos` is never read
[INFO] [stdout]   --> src/vartig.rs:83:9
[INFO] [stdout]    |
[INFO] [stdout] 83 |         other_vcf_snppos_to_pos = HashMap::default();
[INFO] [stdout]    |         ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: maybe it is overwritten before being read?
[INFO] [stdout]    = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: value assigned to `other_vcf_snppos_to_pos` is never read
[INFO] [stdout]   --> src/vartig.rs:79:38
[INFO] [stdout]    |
[INFO] [stdout] 79 |         (other_vcf_snppos_to_allele, other_vcf_snppos_to_pos) = get_vcf_profile(other_vcf.unwrap())
[INFO] [stdout]    |                                      ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: maybe it is overwritten before being read?
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `x`
[INFO] [stdout]    --> src/main.rs:165:21
[INFO] [stdout]     |
[INFO] [stdout] 165 |                 let x = sync.lock().unwrap();
[INFO] [stdout]     |                     ^ help: if this is intentional, prefix it with an underscore: `_x`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `error_cutoff`
[INFO] [stdout]    --> src/main.rs:208:13
[INFO] [stdout]     |
[INFO] [stdout] 208 |         let error_cutoff = 0.0;
[INFO] [stdout]     |             ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_error_cutoff`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `cutoff_tig1_len`
[INFO] [stdout]    --> src/main.rs:283:13
[INFO] [stdout]     |
[INFO] [stdout] 283 |         let cutoff_tig1_len = tig1
[INFO] [stdout]     |             ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_cutoff_tig1_len`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `cutoff_tig2_len`
[INFO] [stdout]    --> src/main.rs:288:13
[INFO] [stdout]     |
[INFO] [stdout] 288 |         let cutoff_tig2_len = tig2
[INFO] [stdout]     |             ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_cutoff_tig2_len`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `x`
[INFO] [stdout]    --> src/main.rs:165:21
[INFO] [stdout]     |
[INFO] [stdout] 165 |                 let x = sync.lock().unwrap();
[INFO] [stdout]     |                     ^ help: if this is intentional, prefix it with an underscore: `_x`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `error_cutoff`
[INFO] [stdout]    --> src/main.rs:208:13
[INFO] [stdout]     |
[INFO] [stdout] 208 |         let error_cutoff = 0.0;
[INFO] [stdout]     |             ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_error_cutoff`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `cutoff_tig1_len`
[INFO] [stdout]    --> src/main.rs:283:13
[INFO] [stdout]     |
[INFO] [stdout] 283 |         let cutoff_tig1_len = tig1
[INFO] [stdout]     |             ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_cutoff_tig1_len`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `cutoff_tig2_len`
[INFO] [stdout]    --> src/main.rs:288:13
[INFO] [stdout]     |
[INFO] [stdout] 288 |         let cutoff_tig2_len = tig2
[INFO] [stdout]     |             ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_cutoff_tig2_len`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [optimized + debuginfo] target(s) in 58.35s
[INFO] running `Command { std: "docker" "inspect" "e9c6b04ef25efdc1e425a238e4f8aa158bb40c95e6f27ac909e2d16035ee7a8e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e9c6b04ef25efdc1e425a238e4f8aa158bb40c95e6f27ac909e2d16035ee7a8e", kill_on_drop: false }`
[INFO] [stdout] e9c6b04ef25efdc1e425a238e4f8aa158bb40c95e6f27ac909e2d16035ee7a8e
