[INFO] cloning repository https://github.com/0ncorhynchus/pdbstat
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/0ncorhynchus/pdbstat" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F0ncorhynchus%2Fpdbstat", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F0ncorhynchus%2Fpdbstat'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 4ad97d115b0b9b3e9628155b646db596a5063109
[INFO] checking 0ncorhynchus/pdbstat against master#46424fb5054f211ec836c5c03159f92e46bb35ac for pr-139042
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F0ncorhynchus%2Fpdbstat" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/0ncorhynchus/pdbstat on toolchain 46424fb5054f211ec836c5c03159f92e46bb35ac
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+46424fb5054f211ec836c5c03159f92e46bb35ac" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/0ncorhynchus/pdbstat
[INFO] finished tweaking git repo https://github.com/0ncorhynchus/pdbstat
[INFO] tweaked toml for git repo https://github.com/0ncorhynchus/pdbstat written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/0ncorhynchus/pdbstat already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+46424fb5054f211ec836c5c03159f92e46bb35ac" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded cmake v0.1.24
[INFO] [stderr]   Downloaded gcc v0.3.51
[INFO] [stderr]   Downloaded libc v0.2.24
[INFO] [stderr]   Downloaded chemfiles-sys v0.7.40
[INFO] [stderr]   Downloaded chemfiles v0.7.40
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4b26683ee3c49f365255c425c23003cbf4366de097804722c29c5bbbee3624d2" "/opt/rustwide/cargo-home/bin/cargo" "+46424fb5054f211ec836c5c03159f92e46bb35ac" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d35d7d1d0c8fc4eb80644fb6d2baec57c6fb2e9a5d92692417e8e82fd5979c3f
[INFO] running `Command { std: "docker" "start" "-a" "d35d7d1d0c8fc4eb80644fb6d2baec57c6fb2e9a5d92692417e8e82fd5979c3f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d35d7d1d0c8fc4eb80644fb6d2baec57c6fb2e9a5d92692417e8e82fd5979c3f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d35d7d1d0c8fc4eb80644fb6d2baec57c6fb2e9a5d92692417e8e82fd5979c3f", kill_on_drop: false }`
[INFO] [stdout] d35d7d1d0c8fc4eb80644fb6d2baec57c6fb2e9a5d92692417e8e82fd5979c3f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4b26683ee3c49f365255c425c23003cbf4366de097804722c29c5bbbee3624d2" "/opt/rustwide/cargo-home/bin/cargo" "+46424fb5054f211ec836c5c03159f92e46bb35ac" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] f72db70283500f4168fb5297ef41f215490c0c53c853365746b360be2ea8286f
[INFO] running `Command { std: "docker" "start" "-a" "f72db70283500f4168fb5297ef41f215490c0c53c853365746b360be2ea8286f", kill_on_drop: false }`
[INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr]    Compiling gcc v0.3.51
[INFO] [stderr]     Checking libc v0.2.24
[INFO] [stderr]    Compiling cmake v0.1.24
[INFO] [stderr]    Compiling chemfiles-sys v0.7.40
[INFO] [stderr] error: failed to run custom build command for `chemfiles-sys v0.7.40`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/chemfiles-sys-a002e62328644896/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   running: cd "/opt/rustwide/target/debug/build/chemfiles-sys-611bbdec0d84b1ad/out/build" && CMAKE_PREFIX_PATH="" "cmake" "/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/." "-DBUILD_SHARED_LIBS=OFF" "-DCMAKE_POSITION_INDEPENDENT_CODE=ON" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/chemfiles-sys-611bbdec0d84b1ad/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_BUILD_TYPE=Debug"
[INFO] [stderr]   -- The C compiler identification is GNU 13.3.0
[INFO] [stderr]   -- The CXX compiler identification is GNU 13.3.0
[INFO] [stderr]   -- Detecting C compiler ABI info
[INFO] [stderr]   -- Detecting C compiler ABI info - done
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc - skipped
[INFO] [stderr]   -- Detecting C compile features
[INFO] [stderr]   -- Detecting C compile features - done
[INFO] [stderr]   -- Detecting CXX compiler ABI info
[INFO] [stderr]   -- Detecting CXX compiler ABI info - done
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++ - skipped
[INFO] [stderr]   -- Detecting CXX compile features
[INFO] [stderr]   -- Detecting CXX compile features - done
[INFO] [stderr]   -- Unpacking fmt sources
[INFO] [stderr]   -- Unpacking netcdf sources
[INFO] [stderr]   -- Unpacking tng sources
[INFO] [stderr]   -- Unpacking molfiles sources
[INFO] [stderr]   -- Configuring done (29.3s)
[INFO] [stderr]   -- Generating done (0.1s)
[INFO] [stderr]   -- Build files have been written to: /opt/rustwide/target/debug/build/chemfiles-sys-611bbdec0d84b1ad/out/build
[INFO] [stderr]   running: cd "/opt/rustwide/target/debug/build/chemfiles-sys-611bbdec0d84b1ad/out/build" && "cmake" "--build" "." "--target" "install" "--config" "Debug" "--" "-j16"
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[INFO] [stderr]   [  4%] Building CXX object /opt/rustwide/target/debug/build/chemfiles-sys-611bbdec0d84b1ad/out/build/chemfiles/external/fmt/fmt/CMakeFiles/fmt.dir/ostream.cc.o
[INFO] [stderr]   [  5%] Building CXX object /opt/rustwide/target/debug/build/chemfiles-sys-611bbdec0d84b1ad/out/build/chemfiles/external/fmt/fmt/CMakeFiles/fmt.dir/printf.cc.o
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[INFO] [stderr]   [ 89%] Building CXX object chemfiles/CMakeFiles/chemfiles.dir/src/capi/selection.cpp.o
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   CMake Warning (dev) in CMakeLists.txt:
[INFO] [stderr]     No project() command is present.  The top-level CMakeLists.txt file must
[INFO] [stderr]     contain a literal, direct call to the project() command.  Add a line of
[INFO] [stderr]     code such as
[INFO] [stderr] 
[INFO] [stderr]       project(ProjectName)
[INFO] [stderr] 
[INFO] [stderr]     near the top of the file, but after cmake_minimum_required().
[INFO] [stderr] 
[INFO] [stderr]     CMake is pretending there is a "project(Project)" command on the first
[INFO] [stderr]     line.
[INFO] [stderr]   This warning is for project developers.  Use -Wno-dev to suppress it.
[INFO] [stderr] 
[INFO] [stderr]   CMake Warning (dev) in CMakeLists.txt:
[INFO] [stderr]     cmake_minimum_required() should be called prior to this top-level project()
[INFO] [stderr]     call.  Please see the cmake-commands(7) manual for usage documentation of
[INFO] [stderr]     both commands.
[INFO] [stderr]   This warning is for project developers.  Use -Wno-dev to suppress it.
[INFO] [stderr] 
[INFO] [stderr]   CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required):
[INFO] [stderr]     Compatibility with CMake < 3.5 will be removed from a future version of
[INFO] [stderr]     CMake.
[INFO] [stderr] 
[INFO] [stderr]     Update the VERSION argument <min> value or use a ...<max> suffix to tell
[INFO] [stderr]     CMake that the project does not need compatibility with older versions.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Deprecation Warning at chemfiles/CMakeLists.txt:1 (cmake_minimum_required):
[INFO] [stderr]     Compatibility with CMake < 3.5 will be removed from a future version of
[INFO] [stderr]     CMake.
[INFO] [stderr] 
[INFO] [stderr]     Update the VERSION argument <min> value or use a ...<max> suffix to tell
[INFO] [stderr]     CMake that the project does not need compatibility with older versions.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Deprecation Warning at chemfiles/CMakeLists.txt:5 (cmake_policy):
[INFO] [stderr]     Compatibility with CMake < 3.5 will be removed from a future version of
[INFO] [stderr]     CMake.
[INFO] [stderr] 
[INFO] [stderr]     Update the VERSION argument <min> value or use a ...<max> suffix to tell
[INFO] [stderr]     CMake that the project does not need compatibility with older versions.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Deprecation Warning at chemfiles/CMakeLists.txt:8 (cmake_policy):
[INFO] [stderr]     The OLD behavior for policy CMP0042 will be removed from a future version
[INFO] [stderr]     of CMake.
[INFO] [stderr] 
[INFO] [stderr]     The cmake-policies(7) manual explains that the OLD behaviors of all
[INFO] [stderr]     policies are deprecated and that a policy should be set to OLD only under
[INFO] [stderr]     specific short-term circumstances.  Projects should be ported to the NEW
[INFO] [stderr]     behavior and not rely on setting a policy to OLD.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-611bbdec0d84b1ad/out/build/chemfiles/external/fmt/CMakeLists.txt:1 (cmake_minimum_required):
[INFO] [stderr]     Compatibility with CMake < 3.5 will be removed from a future version of
[INFO] [stderr]     CMake.
[INFO] [stderr] 
[INFO] [stderr]     Update the VERSION argument <min> value or use a ...<max> suffix to tell
[INFO] [stderr]     CMake that the project does not need compatibility with older versions.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-611bbdec0d84b1ad/out/build/chemfiles/external/netcdf/CMakeLists.txt:1 (cmake_minimum_required):
[INFO] [stderr]     Compatibility with CMake < 3.5 will be removed from a future version of
[INFO] [stderr]     CMake.
[INFO] [stderr] 
[INFO] [stderr]     Update the VERSION argument <min> value or use a ...<max> suffix to tell
[INFO] [stderr]     CMake that the project does not need compatibility with older versions.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-611bbdec0d84b1ad/out/build/chemfiles/external/tng/CMakeLists.txt:1 (cmake_minimum_required):
[INFO] [stderr]     Compatibility with CMake < 3.5 will be removed from a future version of
[INFO] [stderr]     CMake.
[INFO] [stderr] 
[INFO] [stderr]     Update the VERSION argument <min> value or use a ...<max> suffix to tell
[INFO] [stderr]     CMake that the project does not need compatibility with older versions.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-611bbdec0d84b1ad/out/build/chemfiles/external/molfiles/CMakeLists.txt:1 (cmake_minimum_required):
[INFO] [stderr]     Compatibility with CMake < 3.5 will be removed from a future version of
[INFO] [stderr]     CMake.
[INFO] [stderr] 
[INFO] [stderr]     Update the VERSION argument <min> value or use a ...<max> suffix to tell
[INFO] [stderr]     CMake that the project does not need compatibility with older versions.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   In file included from /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/src/Residue.cpp:8:
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:30:40: error: 'uint64_t' has not been declared
[INFO] [stderr]      30 |     explicit Residue(std::string name, uint64_t resid = static_cast<uint64_t>(-1));
[INFO] [stderr]         |                                        ^~~~~~~~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:43:5: error: 'uint64_t' does not name a type
[INFO] [stderr]      43 |     uint64_t id() const {
[INFO] [stderr]         |     ^~~~~~~~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:16:1: note: 'uint64_t' is defined in header '<cstdint>'; did you forget to '#include <cstdint>'?
[INFO] [stderr]      15 | #include "chemfiles/sorted_set.hpp"
[INFO] [stderr]     +++ |+#include <cstdint>
[INFO] [stderr]      16 | 
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:67:5: error: 'uint64_t' does not name a type
[INFO] [stderr]      67 |     uint64_t id_ = static_cast<uint64_t>(-1);
[INFO] [stderr]         |     ^~~~~~~~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:67:5: note: 'uint64_t' is defined in header '<cstdint>'; did you forget to '#include <cstdint>'?
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:30:69: error: 'uint64_t' does not name a type
[INFO] [stderr]      30 |     explicit Residue(std::string name, uint64_t resid = static_cast<uint64_t>(-1));
[INFO] [stderr]         |                                                                     ^~~~~~~~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:30:69: note: 'uint64_t' is defined in header '<cstdint>'; did you forget to '#include <cstdint>'?
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp: In function 'bool chemfiles::operator==(const Residue&, const Residue&)':
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:74:16: error: 'const class chemfiles::Residue' has no member named 'id'
[INFO] [stderr]      74 |     return lhs.id() == rhs.id() && lhs.name() == rhs.name() &&
[INFO] [stderr]         |                ^~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:74:28: error: 'const class chemfiles::Residue' has no member named 'id'
[INFO] [stderr]      74 |     return lhs.id() == rhs.id() && lhs.name() == rhs.name() &&
[INFO] [stderr]         |                            ^~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/src/Residue.cpp: At global scope:
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/src/Residue.cpp:12:36: error: 'uint64_t' has not been declared
[INFO] [stderr]      12 | Residue::Residue(std::string name, uint64_t resid):
[INFO] [stderr]         |                                    ^~~~~~~~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/src/Residue.cpp: In constructor 'chemfiles::Residue::Residue(std::string, int)':
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/src/Residue.cpp:13:29: error: class 'chemfiles::Residue' does not have any field named 'id_'
[INFO] [stderr]      13 |     name_(std::move(name)), id_(resid) {}
[INFO] [stderr]         |                             ^~~
[INFO] [stderr]   gmake[2]: *** [chemfiles/CMakeFiles/chemfiles.dir/build.make:160: chemfiles/CMakeFiles/chemfiles.dir/src/Residue.cpp.o] Error 1
[INFO] [stderr]   gmake[2]: *** Waiting for unfinished jobs....
[INFO] [stderr]   In file included from /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Topology.hpp:16,
[INFO] [stderr]                    from /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/src/Topology.cpp:9:
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:30:40: error: 'uint64_t' has not been declared
[INFO] [stderr]      30 |     explicit Residue(std::string name, uint64_t resid = static_cast<uint64_t>(-1));
[INFO] [stderr]         |                                        ^~~~~~~~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:43:5: error: 'uint64_t' does not name a type
[INFO] [stderr]      43 |     uint64_t id() const {
[INFO] [stderr]         |     ^~~~~~~~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:1:1: note: 'uint64_t' is defined in header '<cstdint>'; did you forget to '#include <cstdint>'?
[INFO] [stderr]     +++ |+#include <cstdint>
[INFO] [stderr]       1 | // Chemfiles, a modern library for chemistry file reading and writing
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:67:5: error: 'uint64_t' does not name a type
[INFO] [stderr]      67 |     uint64_t id_ = static_cast<uint64_t>(-1);
[INFO] [stderr]         |     ^~~~~~~~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:67:5: note: 'uint64_t' is defined in header '<cstdint>'; did you forget to '#include <cstdint>'?
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:30:69: error: 'uint64_t' does not name a type
[INFO] [stderr]      30 |     explicit Residue(std::string name, uint64_t resid = static_cast<uint64_t>(-1));
[INFO] [stderr]         |                                                                     ^~~~~~~~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:30:69: note: 'uint64_t' is defined in header '<cstdint>'; did you forget to '#include <cstdint>'?
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp: In function 'bool chemfiles::operator==(const Residue&, const Residue&)':
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:74:16: error: 'const class chemfiles::Residue' has no member named 'id'
[INFO] [stderr]      74 |     return lhs.id() == rhs.id() && lhs.name() == rhs.name() &&
[INFO] [stderr]         |                ^~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/include/chemfiles/Residue.hpp:74:28: error: 'const class chemfiles::Residue' has no member named 'id'
[INFO] [stderr]      74 |     return lhs.id() == rhs.id() && lhs.name() == rhs.name() &&
[INFO] [stderr]         |                            ^~
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/src/Topology.cpp: In member function 'void chemfiles::Topology::add_residue(chemfiles::Residue)':
[INFO] [stderr]   /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.7.40/chemfiles/src/Topology.cpp:96:48: error: '__gnu_cxx::__alloc_traits<std::allocator<chemfiles::Residue>, chemfiles::Residue>::value_type' {aka 'class chemfiles::Residue'} has no member named 'id'
[INFO] [stderr]      96 |             auto resid = residues_[it->second].id();
[INFO] [stderr]         |                                                ^~
[INFO] [stderr]   gmake[2]: *** [chemfiles/CMakeFiles/chemfiles.dir/build.make:188: chemfiles/CMakeFiles/chemfiles.dir/src/Topology.cpp.o] Error 1
[INFO] [stderr]   gmake[1]: *** [CMakeFiles/Makefile2:237: chemfiles/CMakeFiles/chemfiles.dir/all] Error 2
[INFO] [stderr]   gmake: *** [Makefile:136: all] Error 2
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/cmake-0.1.24/src/lib.rs:593:5:
[INFO] [stderr] 
[INFO] [stderr]   command did not execute successfully, got: exit status: 2
[INFO] [stderr] 
[INFO] [stderr]   build script failed, must exit now
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x6102d3aca6c2 - std::backtrace_rs::backtrace::libunwind::trace::hfe33f3fca02d9d49
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stderr]      1:     0x6102d3aca6c2 - std::backtrace_rs::backtrace::trace_unsynchronized::hf8c1336b7abecebc
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stderr]      2:     0x6102d3aca6c2 - std::sys::backtrace::_print_fmt::h1cc3b7371fcb02ce
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/sys/backtrace.rs:66:9
[INFO] [stderr]      3:     0x6102d3aca6c2 - <std::sys::backtrace::BacktraceLock::print::DisplayBacktrace as core::fmt::Display>::fmt::h3fdbad3682625d65
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/sys/backtrace.rs:39:26
[INFO] [stderr]      4:     0x6102d3aed953 - core::fmt::rt::Argument::fmt::hac739edf89f473e5
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/core/src/fmt/rt.rs:184:76
[INFO] [stderr]      5:     0x6102d3aed953 - core::fmt::write::h46b3661118fd93d9
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/core/src/fmt/mod.rs:1480:21
[INFO] [stderr]      6:     0x6102d3ac7913 - std::io::default_write_fmt::h07a956b98e0e549f
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/io/mod.rs:639:11
[INFO] [stderr]      7:     0x6102d3ac7913 - std::io::Write::write_fmt::hefeac8c5ed2b4ca0
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/io/mod.rs:1914:13
[INFO] [stderr]      8:     0x6102d3aca512 - std::sys::backtrace::BacktraceLock::print::hc92ef2ccd32eaf3d
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/sys/backtrace.rs:42:9
[INFO] [stderr]      9:     0x6102d3acb902 - std::panicking::default_hook::{{closure}}::h26c6ecc533f19c32
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/panicking.rs:300:22
[INFO] [stderr]     10:     0x6102d3acb705 - std::panicking::default_hook::he6d1a5a8f8627255
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/panicking.rs:327:9
[INFO] [stderr]     11:     0x6102d3acc2e2 - std::panicking::rust_panic_with_hook::hc6a05938888c0a6d
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/panicking.rs:833:13
[INFO] [stderr]     12:     0x6102d3acc06a - std::panicking::begin_panic_handler::{{closure}}::hce41832356916883
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/panicking.rs:706:13
[INFO] [stderr]     13:     0x6102d3acabc9 - std::sys::backtrace::__rust_end_short_backtrace::h809ad2921436b614
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/sys/backtrace.rs:168:18
[INFO] [stderr]     14:     0x6102d3acbcfd - __rustc[13f85059a3e01eb3]::rust_begin_unwind
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/panicking.rs:697:5
[INFO] [stderr]     15:     0x6102d3aec860 - core::panicking::panic_fmt::h7e568a56ffdf448b
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/core/src/panicking.rs:75:14
[INFO] [stderr]     16:     0x6102d3a8a39b - cmake::fail::hb7f56702919f9b74
[INFO] [stderr]     17:     0x6102d3a89b9a - cmake::run::h8fec77798b8111d1
[INFO] [stderr]     18:     0x6102d3a87b68 - cmake::Config::build::h2d444b84f860fa6d
[INFO] [stderr]     19:     0x6102d3a7f25f - build_script_build::main::h0ae3a62f1fcf2802
[INFO] [stderr]     20:     0x6102d3a7dcf3 - core::ops::function::FnOnce::call_once::h22e200b27c7ce3de
[INFO] [stderr]     21:     0x6102d3a7dbb6 - std::sys::backtrace::__rust_begin_short_backtrace::he719ef14755b7791
[INFO] [stderr]     22:     0x6102d3a7daf9 - std::rt::lang_start::{{closure}}::hc23c92d69ad11793
[INFO] [stderr]     23:     0x6102d3ac3be0 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::h07820d99f666c4f4
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/core/src/ops/function.rs:284:13
[INFO] [stderr]     24:     0x6102d3ac3be0 - std::panicking::try::do_call::hcb349621034e7d22
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/panicking.rs:589:40
[INFO] [stderr]     25:     0x6102d3ac3be0 - std::panicking::try::h14d805015e715701
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/panicking.rs:552:19
[INFO] [stderr]     26:     0x6102d3ac3be0 - std::panic::catch_unwind::he07ff3323b1b1ad4
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/panic.rs:359:14
[INFO] [stderr]     27:     0x6102d3ac3be0 - std::rt::lang_start_internal::{{closure}}::he746c4aa7e6c87ae
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/rt.rs:168:24
[INFO] [stderr]     28:     0x6102d3ac3be0 - std::panicking::try::do_call::h5c36b323e35fe62d
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/panicking.rs:589:40
[INFO] [stderr]     29:     0x6102d3ac3be0 - std::panicking::try::hb9a2d1353ef314fe
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/panicking.rs:552:19
[INFO] [stderr]     30:     0x6102d3ac3be0 - std::panic::catch_unwind::he0661a914ab09041
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/panic.rs:359:14
[INFO] [stderr]     31:     0x6102d3ac3be0 - std::rt::lang_start_internal::h690c392d3d3c052a
[INFO] [stderr]                                  at /rustc/46424fb5054f211ec836c5c03159f92e46bb35ac/library/std/src/rt.rs:164:5
[INFO] [stderr]     32:     0x6102d3a7dae1 - std::rt::lang_start::h7b3ffe618cc93e03
[INFO] [stderr]     33:     0x6102d3a7fff5 - main
[INFO] [stderr]     34:     0x7286fb2351ca - <unknown>
[INFO] [stderr]     35:     0x7286fb23528b - __libc_start_main
[INFO] [stderr]     36:     0x6102d3a7d8b5 - _start
[INFO] [stderr]     37:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "f72db70283500f4168fb5297ef41f215490c0c53c853365746b360be2ea8286f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f72db70283500f4168fb5297ef41f215490c0c53c853365746b360be2ea8286f", kill_on_drop: false }`
[INFO] [stdout] f72db70283500f4168fb5297ef41f215490c0c53c853365746b360be2ea8286f
