[INFO] cloning repository https://github.com/sciencegenome/graphtools
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/sciencegenome/graphtools" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsciencegenome%2Fgraphtools", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsciencegenome%2Fgraphtools'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b9a2831243d4bac7ea9288f42e19ffe2d2bbf5da
[INFO] checking sciencegenome/graphtools against master#068609ce766e55d2e7371cd2a86143a6d7e8e2e4 for pr-138952
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsciencegenome%2Fgraphtools" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/sciencegenome/graphtools on toolchain 068609ce766e55d2e7371cd2a86143a6d7e8e2e4
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+068609ce766e55d2e7371cd2a86143a6d7e8e2e4" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/sciencegenome/graphtools
[INFO] finished tweaking git repo https://github.com/sciencegenome/graphtools
[INFO] tweaked toml for git repo https://github.com/sciencegenome/graphtools written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/sciencegenome/graphtools already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+068609ce766e55d2e7371cd2a86143a6d7e8e2e4" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded format_num v0.1.0
[INFO] [stderr]   Downloaded charts v0.3.0
[INFO] [stderr]   Downloaded syn v2.0.97
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4b26683ee3c49f365255c425c23003cbf4366de097804722c29c5bbbee3624d2" "/opt/rustwide/cargo-home/bin/cargo" "+068609ce766e55d2e7371cd2a86143a6d7e8e2e4" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 23832f76f8300ea92c17f99509886b0d3e0102e8ee167f926e9fad89a9c1be60
[INFO] running `Command { std: "docker" "start" "-a" "23832f76f8300ea92c17f99509886b0d3e0102e8ee167f926e9fad89a9c1be60", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "23832f76f8300ea92c17f99509886b0d3e0102e8ee167f926e9fad89a9c1be60", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "23832f76f8300ea92c17f99509886b0d3e0102e8ee167f926e9fad89a9c1be60", kill_on_drop: false }`
[INFO] [stdout] 23832f76f8300ea92c17f99509886b0d3e0102e8ee167f926e9fad89a9c1be60
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4b26683ee3c49f365255c425c23003cbf4366de097804722c29c5bbbee3624d2" "/opt/rustwide/cargo-home/bin/cargo" "+068609ce766e55d2e7371cd2a86143a6d7e8e2e4" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 24ef1872d548b31b0702b34b1e9f9932ea2018f3c0ae0d4eae9f6131f7fc8918
[INFO] running `Command { std: "docker" "start" "-a" "24ef1872d548b31b0702b34b1e9f9932ea2018f3c0ae0d4eae9f6131f7fc8918", kill_on_drop: false }`
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]    Compiling semver v1.0.25
[INFO] [stderr]    Compiling pkg-config v0.3.31
[INFO] [stderr]     Checking simd-adler32 v0.3.7
[INFO] [stderr]    Compiling autocfg v1.4.0
[INFO] [stderr]    Compiling shlex v1.3.0
[INFO] [stderr]    Compiling libc v0.2.169
[INFO] [stderr]    Compiling proc-macro2 v1.0.93
[INFO] [stderr]     Checking adler2 v2.0.0
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]    Compiling cc v1.2.12
[INFO] [stderr]     Checking miniz_oxide v0.8.3
[INFO] [stderr]     Checking crc32fast v1.4.2
[INFO] [stderr]    Compiling unicode-ident v1.0.16
[INFO] [stderr]    Compiling rustc_version v0.4.1
[INFO] [stderr]     Checking memchr v2.7.4
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]     Checking flate2 v1.0.35
[INFO] [stderr]    Compiling yeslogic-fontconfig-sys v6.0.0
[INFO] [stderr]    Compiling pathfinder_simd v0.5.4
[INFO] [stderr]     Checking fdeflate v0.3.7
[INFO] [stderr]     Checking libloading v0.8.6
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]     Checking bitflags v1.3.2
[INFO] [stderr]     Checking color_quant v1.1.0
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]     Checking utf8parse v0.2.2
[INFO] [stderr]     Checking regex-syntax v0.8.5
[INFO] [stderr]     Checking option-ext v0.2.0
[INFO] [stderr]     Checking anstyle-parse v0.2.6
[INFO] [stderr]     Checking dlib v0.5.2
[INFO] [stderr]     Checking png v0.17.16
[INFO] [stderr]     Checking crossbeam-epoch v0.9.18
[INFO] [stderr]     Checking dirs-sys v0.4.1
[INFO] [stderr]    Compiling quote v1.0.38
[INFO] [stderr]     Checking same-file v1.0.6
[INFO] [stderr]     Checking plotters-backend v0.3.7
[INFO] [stderr]     Checking bytemuck v1.21.0
[INFO] [stderr]     Checking log v0.4.25
[INFO] [stderr]     Checking is_terminal_polyfill v1.70.1
[INFO] [stderr]     Checking anstyle-query v1.1.2
[INFO] [stderr]     Checking colorchoice v1.0.3
[INFO] [stderr]     Checking anstyle v1.0.10
[INFO] [stderr]     Checking weezl v0.1.8
[INFO] [stderr]     Checking once_cell v1.20.2
[INFO] [stderr]    Compiling font-kit v0.14.2
[INFO] [stderr]    Compiling rayon-core v1.12.1
[INFO] [stderr]     Checking jpeg-decoder v0.3.1
[INFO] [stderr]     Checking anstream v0.6.18
[INFO] [stderr]    Compiling freetype-sys v0.20.1
[INFO] [stderr]     Checking gif v0.12.0
[INFO] [stderr]     Checking pathfinder_geometry v0.5.1
[INFO] [stderr]    Compiling syn v2.0.97
[INFO] [stderr]     Checking walkdir v2.5.0
[INFO] [stderr]     Checking crossbeam-deque v0.8.6
[INFO] [stderr]     Checking dirs v5.0.1
[INFO] [stderr]     Checking bitflags v2.8.0
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]     Checking clap_lex v0.7.4
[INFO] [stderr]     Checking float-ord v0.3.2
[INFO] [stderr]     Checking strsim v0.11.1
[INFO] [stderr]     Checking iana-time-zone v0.1.61
[INFO] [stderr]     Checking lazy_static v1.5.0
[INFO] [stderr]     Checking plotters-svg v0.3.7
[INFO] [stderr]     Checking chrono v0.4.39
[INFO] [stderr]     Checking clap_builder v4.5.27
[INFO] [stderr]     Checking ttf-parser v0.20.0
[INFO] [stderr]     Checking image v0.24.9
[INFO] [stderr]     Checking svg v0.7.2
[INFO] [stderr]     Checking either v1.13.0
[INFO] [stderr]     Checking colored v3.0.0
[INFO] [stderr]     Checking rayon v1.10.0
[INFO] [stderr]     Checking regex-automata v0.4.9
[INFO] [stderr]     Checking plotters-bitmap v0.3.7
[INFO] [stderr]     Checking plotters v0.3.7
[INFO] [stderr]    Compiling clap_derive v4.5.24
[INFO] [stderr]     Checking regex v1.11.1
[INFO] [stderr]     Checking format_num v0.1.0
[INFO] [stderr]     Checking charts v0.3.0
[INFO] [stderr]     Checking clap v4.5.27
[INFO] [stderr]     Checking phylogenomicstools v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 39.43s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: svg v0.7.2
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "24ef1872d548b31b0702b34b1e9f9932ea2018f3c0ae0d4eae9f6131f7fc8918", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "24ef1872d548b31b0702b34b1e9f9932ea2018f3c0ae0d4eae9f6131f7fc8918", kill_on_drop: false }`
[INFO] [stdout] 24ef1872d548b31b0702b34b1e9f9932ea2018f3c0ae0d4eae9f6131f7fc8918