[INFO] cloning repository https://github.com/rmhubley/BLAST_gapalign
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/rmhubley/BLAST_gapalign" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign'...
[INFO] [stderr] /workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign: No space left on device
[WARN] Retrying crate fetch in 3 seconds (attempt 1)
[INFO] cloning repository https://github.com/rmhubley/BLAST_gapalign
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/rmhubley/BLAST_gapalign" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 8beb37fa8be0666f90cb1470698728022d16bf98
[INFO] checking rmhubley/BLAST_gapalign against try#5e7498e6740d105521420ac0ab146e2c7a21596d for pr-138363
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] [stderr] error: unable to write file src/lib.rs
[INFO] [stderr] fatal: unable to checkout working tree
[INFO] [stderr] warning: Clone succeeded, but checkout failed.
[INFO] [stderr] You can inspect what was checked out with 'git status'
[INFO] [stderr] and retry with 'git restore --source=HEAD :/'
[INFO] [stderr] 
[INFO] checking rmhubley/BLAST_gapalign against try#5e7498e6740d105521420ac0ab146e2c7a21596d for pr-138363
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/rmhubley/BLAST_gapalign on toolchain 5e7498e6740d105521420ac0ab146e2c7a21596d
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5e7498e6740d105521420ac0ab146e2c7a21596d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/rmhubley/BLAST_gapalign
[INFO] finished tweaking git repo https://github.com/rmhubley/BLAST_gapalign
[INFO] tweaked toml for git repo https://github.com/rmhubley/BLAST_gapalign written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] crate git repo https://github.com/rmhubley/BLAST_gapalign already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5e7498e6740d105521420ac0ab146e2c7a21596d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:1680c8fbd8dfb46fcd6d22e546df16ab0e007457dc29fcd9e987cdd5077fd1af" "/opt/rustwide/cargo-home/bin/cargo" "+5e7498e6740d105521420ac0ab146e2c7a21596d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 1f2a6e2516818fc075e0d40089445bb2b2e6731d1e34b14ba8ef43fa7af2fbc4
[INFO] running `Command { std: "docker" "start" "-a" "1f2a6e2516818fc075e0d40089445bb2b2e6731d1e34b14ba8ef43fa7af2fbc4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "1f2a6e2516818fc075e0d40089445bb2b2e6731d1e34b14ba8ef43fa7af2fbc4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1f2a6e2516818fc075e0d40089445bb2b2e6731d1e34b14ba8ef43fa7af2fbc4", kill_on_drop: false }`
[INFO] [stdout] 1f2a6e2516818fc075e0d40089445bb2b2e6731d1e34b14ba8ef43fa7af2fbc4
[INFO] checking rmhubley/BLAST_gapalign against try#5e7498e6740d105521420ac0ab146e2c7a21596d for pr-138363
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] [stderr] fatal: update_ref failed for ref 'HEAD': cannot update the ref 'refs/heads/main': unable to create directory for '/workspace/builds/worker-1-tc2/source/.git/logs/refs/heads/main': No such file or directory
[INFO] checking rmhubley/BLAST_gapalign against try#5e7498e6740d105521420ac0ab146e2c7a21596d for pr-138363
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/rmhubley/BLAST_gapalign on toolchain 5e7498e6740d105521420ac0ab146e2c7a21596d
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5e7498e6740d105521420ac0ab146e2c7a21596d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/rmhubley/BLAST_gapalign
[INFO] finished tweaking git repo https://github.com/rmhubley/BLAST_gapalign
[INFO] tweaked toml for git repo https://github.com/rmhubley/BLAST_gapalign written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] crate git repo https://github.com/rmhubley/BLAST_gapalign already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5e7498e6740d105521420ac0ab146e2c7a21596d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:1680c8fbd8dfb46fcd6d22e546df16ab0e007457dc29fcd9e987cdd5077fd1af" "/opt/rustwide/cargo-home/bin/cargo" "+5e7498e6740d105521420ac0ab146e2c7a21596d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e1269b1eb643b8e0472bb06ddebd9bed0daddeda62325efb3e00d9d36c45bcbd
[INFO] running `Command { std: "docker" "start" "-a" "e1269b1eb643b8e0472bb06ddebd9bed0daddeda62325efb3e00d9d36c45bcbd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e1269b1eb643b8e0472bb06ddebd9bed0daddeda62325efb3e00d9d36c45bcbd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e1269b1eb643b8e0472bb06ddebd9bed0daddeda62325efb3e00d9d36c45bcbd", kill_on_drop: false }`
[INFO] [stdout] e1269b1eb643b8e0472bb06ddebd9bed0daddeda62325efb3e00d9d36c45bcbd
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:1680c8fbd8dfb46fcd6d22e546df16ab0e007457dc29fcd9e987cdd5077fd1af" "/opt/rustwide/cargo-home/bin/cargo" "+5e7498e6740d105521420ac0ab146e2c7a21596d" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] dcc33d0bf304829ae30650f0d6cdc3a70935d1575e1d183558555f191b53cb53
[INFO] running `Command { std: "docker" "start" "-a" "dcc33d0bf304829ae30650f0d6cdc3a70935d1575e1d183558555f191b53cb53", kill_on_drop: false }`
[INFO] [stderr]     Checking blast_gapalign v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.12s
[INFO] running `Command { std: "docker" "inspect" "dcc33d0bf304829ae30650f0d6cdc3a70935d1575e1d183558555f191b53cb53", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "dcc33d0bf304829ae30650f0d6cdc3a70935d1575e1d183558555f191b53cb53", kill_on_drop: false }`
[INFO] [stdout] dcc33d0bf304829ae30650f0d6cdc3a70935d1575e1d183558555f191b53cb53