[INFO] cloning repository https://github.com/togovar/clinvar_xml2vcf
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/togovar/clinvar_xml2vcf" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftogovar%2Fclinvar_xml2vcf", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftogovar%2Fclinvar_xml2vcf'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 5c4181890a26584640e98ee09ff33cb31ad7e5f0
[INFO] testing togovar/clinvar_xml2vcf against master#ebf0cf75d368c035f4c7e7246d203bd469ee4a51 for pr-137940-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftogovar%2Fclinvar_xml2vcf" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/togovar/clinvar_xml2vcf on toolchain ebf0cf75d368c035f4c7e7246d203bd469ee4a51
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ebf0cf75d368c035f4c7e7246d203bd469ee4a51" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/togovar/clinvar_xml2vcf
[INFO] finished tweaking git repo https://github.com/togovar/clinvar_xml2vcf
[INFO] tweaked toml for git repo https://github.com/togovar/clinvar_xml2vcf written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/togovar/clinvar_xml2vcf already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ebf0cf75d368c035f4c7e7246d203bd469ee4a51" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded strum v0.26.2
[INFO] [stderr]   Downloaded bitflags v2.5.0
[INFO] [stderr]   Downloaded proc-macro2 v1.0.85
[INFO] [stderr]   Downloaded strum_macros v0.26.3
[INFO] [stderr]   Downloaded unicode-width v0.1.12
[INFO] [stderr]   Downloaded miniz_oxide v0.7.3
[INFO] [stderr]   Downloaded memchr v2.7.2
[INFO] [stderr]   Downloaded quick-xml v0.31.0
[INFO] [stderr]   Downloaded regex v1.10.4
[INFO] [stderr]   Downloaded syn v2.0.66
[INFO] [stderr]   Downloaded regex-syntax v0.8.3
[INFO] [stderr]   Downloaded regex-automata v0.4.6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:1680c8fbd8dfb46fcd6d22e546df16ab0e007457dc29fcd9e987cdd5077fd1af" "/opt/rustwide/cargo-home/bin/cargo" "+ebf0cf75d368c035f4c7e7246d203bd469ee4a51" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 5d01d8e42edb305a404d8e1fabe476ed16fdbdbc2a6b75cf49ed19d338e6b386
[INFO] running `Command { std: "docker" "start" "-a" "5d01d8e42edb305a404d8e1fabe476ed16fdbdbc2a6b75cf49ed19d338e6b386", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5d01d8e42edb305a404d8e1fabe476ed16fdbdbc2a6b75cf49ed19d338e6b386", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5d01d8e42edb305a404d8e1fabe476ed16fdbdbc2a6b75cf49ed19d338e6b386", kill_on_drop: false }`
[INFO] [stdout] 5d01d8e42edb305a404d8e1fabe476ed16fdbdbc2a6b75cf49ed19d338e6b386
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:1680c8fbd8dfb46fcd6d22e546df16ab0e007457dc29fcd9e987cdd5077fd1af" "/opt/rustwide/cargo-home/bin/cargo" "+ebf0cf75d368c035f4c7e7246d203bd469ee4a51" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 53b48b0667140904ea1211a0c93cd83389ba237325f707c3c07b4cb93767c49c
[INFO] running `Command { std: "docker" "start" "-a" "53b48b0667140904ea1211a0c93cd83389ba237325f707c3c07b4cb93767c49c", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.85
[INFO] [stderr]    Compiling libc v0.2.155
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling rustversion v1.0.17
[INFO] [stderr]    Compiling memchr v2.7.2
[INFO] [stderr]    Compiling serde v1.0.203
[INFO] [stderr]    Compiling rustix v0.38.34
[INFO] [stderr]    Compiling unicode-width v0.1.12
[INFO] [stderr]    Compiling unicode-segmentation v1.11.0
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling ansi_term v0.12.1
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling heck v0.3.3
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling quote v1.0.36
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]    Compiling syn v2.0.66
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling regex-syntax v0.8.3
[INFO] [stderr]    Compiling linux-raw-sys v0.4.14
[INFO] [stderr]    Compiling bitflags v2.5.0
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling clap v2.34.0
[INFO] [stderr]    Compiling miniz_oxide v0.7.3
[INFO] [stderr]    Compiling fastrand v2.1.0
[INFO] [stderr]    Compiling flate2 v1.0.30
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling regex-automata v0.4.6
[INFO] [stderr]    Compiling tempfile v3.10.1
[INFO] [stderr]    Compiling structopt-derive v0.4.18
[INFO] [stderr]    Compiling serde_derive v1.0.203
[INFO] [stderr]    Compiling strum_macros v0.26.3
[INFO] [stderr]    Compiling structopt v0.3.26
[INFO] [stderr]    Compiling regex v1.10.4
[INFO] [stderr]    Compiling strum v0.26.2
[INFO] [stderr]    Compiling quick-xml v0.31.0
[INFO] [stderr]    Compiling clinvar v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 33.08s
[INFO] running `Command { std: "docker" "inspect" "53b48b0667140904ea1211a0c93cd83389ba237325f707c3c07b4cb93767c49c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "53b48b0667140904ea1211a0c93cd83389ba237325f707c3c07b4cb93767c49c", kill_on_drop: false }`
[INFO] [stdout] 53b48b0667140904ea1211a0c93cd83389ba237325f707c3c07b4cb93767c49c
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:1680c8fbd8dfb46fcd6d22e546df16ab0e007457dc29fcd9e987cdd5077fd1af" "/opt/rustwide/cargo-home/bin/cargo" "+ebf0cf75d368c035f4c7e7246d203bd469ee4a51" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2490915b78c774cf709919b5207aef2819ca49e2339b949db23a0fbd68c99fd3
[INFO] running `Command { std: "docker" "start" "-a" "2490915b78c774cf709919b5207aef2819ca49e2339b949db23a0fbd68c99fd3", kill_on_drop: false }`
[INFO] [stderr]    Compiling clinvar v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1.27s
[INFO] running `Command { std: "docker" "inspect" "2490915b78c774cf709919b5207aef2819ca49e2339b949db23a0fbd68c99fd3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2490915b78c774cf709919b5207aef2819ca49e2339b949db23a0fbd68c99fd3", kill_on_drop: false }`
[INFO] [stdout] 2490915b78c774cf709919b5207aef2819ca49e2339b949db23a0fbd68c99fd3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:1680c8fbd8dfb46fcd6d22e546df16ab0e007457dc29fcd9e987cdd5077fd1af" "/opt/rustwide/cargo-home/bin/cargo" "+ebf0cf75d368c035f4c7e7246d203bd469ee4a51" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 00b9fef53d2be1c12423f4fe9a0244686d484c5f31863cd22b1feda625093bb5
[INFO] running `Command { std: "docker" "start" "-a" "00b9fef53d2be1c12423f4fe9a0244686d484c5f31863cd22b1feda625093bb5", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.08s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/clinvar-9bdee6fe6f99836a)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/bin/clinvar_xml2vcf.rs (/opt/rustwide/target/debug/deps/clinvar_xml2vcf-01003f87c9a387d8)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stderr]    Doc-tests clinvar
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "00b9fef53d2be1c12423f4fe9a0244686d484c5f31863cd22b1feda625093bb5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "00b9fef53d2be1c12423f4fe9a0244686d484c5f31863cd22b1feda625093bb5", kill_on_drop: false }`
[INFO] [stdout] 00b9fef53d2be1c12423f4fe9a0244686d484c5f31863cd22b1feda625093bb5