[INFO] cloning repository https://github.com/anuradhawick/kmertools
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/anuradhawick/kmertools" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fanuradhawick%2Fkmertools", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fanuradhawick%2Fkmertools'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 78f19f2fb8be38f1326468f7b1d1bca0779a033c
[INFO] checking anuradhawick/kmertools against master#e22dab387f6b4f6a87dfc54ac2f6013dddb41e68 for pr-136776-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fanuradhawick%2Fkmertools" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/anuradhawick/kmertools
[INFO] finished tweaking git repo https://github.com/anuradhawick/kmertools
[INFO] tweaked toml for git repo https://github.com/anuradhawick/kmertools written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/anuradhawick/kmertools on toolchain e22dab387f6b4f6a87dfc54ac2f6013dddb41e68
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e22dab387f6b4f6a87dfc54ac2f6013dddb41e68" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/anuradhawick/kmertools already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+e22dab387f6b4f6a87dfc54ac2f6013dddb41e68" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded wasm-bindgen v0.2.103
[INFO] [stderr]   Downloaded wasm-bindgen-macro-support v0.2.103
[INFO] [stderr]   Downloaded bytecount v0.6.9
[INFO] [stderr]   Downloaded pyo3-macros v0.26.0
[INFO] [stderr]   Downloaded wasm-bindgen-macro v0.2.103
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded enum-map-derive v0.17.0
[INFO] [stderr]   Downloaded ordered-float v5.0.0
[INFO] [stderr]   Downloaded sdd v3.0.10
[INFO] [stderr]   Downloaded windows-link v0.2.0
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded thiserror v2.0.16
[INFO] [stderr]   Downloaded sdd v4.0.1
[INFO] [stderr]   Downloaded saa v3.2.1
[INFO] [stderr]   Downloaded bytemuck v1.23.2
[INFO] [stderr]   Downloaded simba v0.9.1
[INFO] [stderr]   Downloaded js-sys v0.3.80
[INFO] [stderr]   Downloaded serde_core v1.0.225
[INFO] [stderr]   Downloaded regex v1.11.2
[INFO] [stderr]   Downloaded scc v2.4.0
[INFO] [stderr]   Downloaded clap_builder v4.5.47
[INFO] [stderr]   Downloaded scc v3.0.7
[INFO] [stderr]   Downloaded bio v2.3.0
[INFO] [stderr]   Downloaded statrs v0.18.0
[INFO] [stderr]   Downloaded memmap2 v0.9.8
[INFO] [stderr]   Downloaded serde_derive v1.0.225
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.26.0
[INFO] [stderr]   Downloaded regex-syntax v0.8.6
[INFO] [stderr]   Downloaded clap_derive v4.5.47
[INFO] [stderr]   Downloaded clap v4.5.47
[INFO] [stderr]   Downloaded pyo3-ffi v0.26.0
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded thiserror-impl v2.0.16
[INFO] [stderr]   Downloaded enum-map v2.7.3
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded wasm-bindgen-shared v0.2.103
[INFO] [stderr]   Downloaded serde v1.0.225
[INFO] [stderr]   Downloaded wasm-bindgen-backend v0.2.103
[INFO] [stderr]   Downloaded pyo3-build-config v0.26.0
[INFO] [stderr]   Downloaded regex-automata v0.4.10
[INFO] [stderr]   Downloaded petgraph v0.8.2
[INFO] [stderr]   Downloaded pyo3 v0.26.0
[INFO] [stderr]   Downloaded windows-sys v0.61.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:94a0c148923f5b2b52a63ef0eeb1882ad339ab61bce784c8077cbe41c61feb6c" "/opt/rustwide/cargo-home/bin/cargo" "+e22dab387f6b4f6a87dfc54ac2f6013dddb41e68" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] bfa2500667bdb9bb946c334fc44c2a5004ac52ba8eaa97242dcee0eb96d1dff8
[INFO] running `Command { std: "docker" "start" "-a" "bfa2500667bdb9bb946c334fc44c2a5004ac52ba8eaa97242dcee0eb96d1dff8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "bfa2500667bdb9bb946c334fc44c2a5004ac52ba8eaa97242dcee0eb96d1dff8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "bfa2500667bdb9bb946c334fc44c2a5004ac52ba8eaa97242dcee0eb96d1dff8", kill_on_drop: false }`
[INFO] [stdout] bfa2500667bdb9bb946c334fc44c2a5004ac52ba8eaa97242dcee0eb96d1dff8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:94a0c148923f5b2b52a63ef0eeb1882ad339ab61bce784c8077cbe41c61feb6c" "/opt/rustwide/cargo-home/bin/cargo" "+e22dab387f6b4f6a87dfc54ac2f6013dddb41e68" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 9d18c5e11614b85c8ff208597b1dd936ed06da3e6128d1c4c62731c868ba4fe2
[INFO] running `Command { std: "docker" "start" "-a" "9d18c5e11614b85c8ff208597b1dd936ed06da3e6128d1c4c62731c868ba4fe2", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.101
[INFO] [stderr]    Compiling unicode-ident v1.0.19
[INFO] [stderr]    Compiling libc v0.2.175
[INFO] [stderr]    Compiling libm v0.2.15
[INFO] [stderr]     Checking cfg-if v1.0.3
[INFO] [stderr]    Compiling serde_core v1.0.225
[INFO] [stderr]    Compiling zerocopy v0.8.27
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling serde v1.0.225
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]     Checking bytemuck v1.23.2
[INFO] [stderr]    Compiling rustversion v1.0.22
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]     Checking unicode-width v0.2.1
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]    Compiling quote v1.0.40
[INFO] [stderr]     Checking getrandom v0.2.16
[INFO] [stderr]    Compiling syn v2.0.106
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking regex-syntax v0.8.6
[INFO] [stderr]    Compiling portable-atomic v1.11.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling anyhow v1.0.99
[INFO] [stderr]     Checking hashbrown v0.16.0
[INFO] [stderr]    Compiling thiserror v2.0.16
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]    Compiling crc32fast v1.5.0
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking ppv-lite86 v0.2.21
[INFO] [stderr]     Checking indexmap v2.11.4
[INFO] [stderr]     Checking hashbrown v0.15.5
[INFO] [stderr]     Checking csv-core v0.1.12
[INFO] [stderr]     Checking simba v0.9.1
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking rand v0.8.5
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[INFO] [stderr]     Checking fixedbitset v0.5.7
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[INFO] [stderr]     Checking ndarray v0.16.1
[INFO] [stderr]     Checking ordered-float v5.0.0
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]     Checking console v0.15.11
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]    Compiling target-lexicon v0.13.3
[INFO] [stderr]    Compiling rayon-core v1.13.0
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking number_prefix v0.4.0
[INFO] [stderr]     Checking strum v0.26.3
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking indicatif v0.17.11
[INFO] [stderr]     Checking flate2 v1.1.2
[INFO] [stderr]     Checking regex v1.11.2
[INFO] [stderr]     Checking memmap2 v0.9.8
[INFO] [stderr]     Checking kmer v0.2.1 (/opt/rustwide/workdir/kmer)
[INFO] [stderr]     Checking anstyle-parse v0.2.7
[INFO] [stderr]     Checking anstyle v1.0.11
[INFO] [stderr]     Checking anstyle-query v1.1.4
[INFO] [stderr]     Checking colorchoice v1.0.4
[INFO] [stderr]     Checking clap_lex v0.7.5
[INFO] [stderr]     Checking sdd v3.0.10
[INFO] [stderr]     Checking rayon v1.11.0
[INFO] [stderr]    Compiling pyo3-build-config v0.26.0
[INFO] [stderr]     Checking console v0.16.1
[INFO] [stderr]     Checking anstream v0.6.20
[INFO] [stderr]     Checking unit-prefix v0.5.1
[INFO] [stderr]     Checking clap_builder v4.5.47
[INFO] [stderr]     Checking sdd v4.0.1
[INFO] [stderr]     Checking saa v3.2.1
[INFO] [stderr]     Checking indicatif v0.18.0
[INFO] [stderr]     Checking scc v3.0.7
[INFO] [stderr]    Compiling serde_derive v1.0.225
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.16
[INFO] [stderr]     Checking nalgebra v0.33.2
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]    Compiling clap_derive v4.5.47
[INFO] [stderr]    Compiling pyo3-ffi v0.26.0
[INFO] [stderr]    Compiling pyo3-macros-backend v0.26.0
[INFO] [stderr]    Compiling pyo3 v0.26.0
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking clap v4.5.47
[INFO] [stderr]     Checking bv v0.11.1
[INFO] [stderr]     Checking csv v1.3.1
[INFO] [stderr]     Checking multimap v0.10.1
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking scc v2.4.0
[INFO] [stderr]    Compiling pyo3-macros v0.26.0
[INFO] [stderr]     Checking statrs v0.18.0
[INFO] [stderr]     Checking bio v2.3.0
[INFO] [stderr]     Checking ktio v0.2.1 (/opt/rustwide/workdir/ktio)
[INFO] [stderr]     Checking composition v0.2.1 (/opt/rustwide/workdir/composition)
[INFO] [stderr]     Checking counter v0.2.1 (/opt/rustwide/workdir/counter)
[INFO] [stderr]     Checking misc v0.2.1 (/opt/rustwide/workdir/misc)
[INFO] [stderr]     Checking pybindings v0.2.1 (/opt/rustwide/workdir/pybindings)
[INFO] [stderr]     Checking coverage v0.2.1 (/opt/rustwide/workdir/coverage)
[INFO] [stderr]     Checking kmertools v0.2.1 (/opt/rustwide/workdir/kmertools)
[INFO] [stderr]     Checking conda v0.2.1 (/opt/rustwide/workdir/conda)
[INFO] [stderr]     Checking pip v0.2.1 (/opt/rustwide/workdir/pip)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 36s
[INFO] running `Command { std: "docker" "inspect" "9d18c5e11614b85c8ff208597b1dd936ed06da3e6128d1c4c62731c868ba4fe2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9d18c5e11614b85c8ff208597b1dd936ed06da3e6128d1c4c62731c868ba4fe2", kill_on_drop: false }`
[INFO] [stdout] 9d18c5e11614b85c8ff208597b1dd936ed06da3e6128d1c4c62731c868ba4fe2