[INFO] cloning repository https://github.com/guertinlab/seqOutBias [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/guertinlab/seqOutBias" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias'... [INFO] [stderr] fatal: write error: No space left on device [INFO] [stderr] fatal: fetch-pack: invalid index-pack output [WARN] Retrying crate fetch in 3 seconds (attempt 1) [INFO] cloning repository https://github.com/guertinlab/seqOutBias [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/guertinlab/seqOutBias" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 1446ebc35d1cf5ede03fe87fab7650a5e8c0516d [INFO] checking guertinlab/seqOutBias against try#654bc80249a2b2ba8bd16392b5829d87ed96c92d for pr-136458 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/guertinlab/seqOutBias on toolchain 654bc80249a2b2ba8bd16392b5829d87ed96c92d [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+654bc80249a2b2ba8bd16392b5829d87ed96c92d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/guertinlab/seqOutBias [INFO] finished tweaking git repo https://github.com/guertinlab/seqOutBias [INFO] tweaked toml for git repo https://github.com/guertinlab/seqOutBias written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/guertinlab/seqOutBias already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+654bc80249a2b2ba8bd16392b5829d87ed96c92d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: /workspace/builds/worker-5-tc2/source/Cargo.toml: no edition set: defaulting to the 2015 edition while the latest is 2024 [INFO] [stderr] warning: /workspace/builds/worker-5-tc2/source/profile/Cargo.toml: no edition set: defaulting to the 2015 edition while the latest is 2024 [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded ieee754 v0.2.2 [INFO] [stderr] Downloaded miniz-sys v0.1.9 [INFO] [stderr] Downloaded escargot v0.2.0 [INFO] [stderr] Downloaded lazy_static v0.2.6 [INFO] [stderr] Downloaded assert_cmd v0.4.0 [INFO] [stderr] Downloaded rust-htslib v0.12.1 [INFO] [stderr] Downloaded predicates v0.5.2 [INFO] [stderr] Downloaded bincode v0.5.9 [INFO] [stderr] Downloaded flate2 v0.2.18 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:c80049f3b88b82089a44e0f06d0d6029d44b96b7257e55a1cd63dbc9f4c33334" "/opt/rustwide/cargo-home/bin/cargo" "+654bc80249a2b2ba8bd16392b5829d87ed96c92d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] Error response from daemon: write /var/lib/docker/containers/0654d87d0c8dffa215eee6e9eb605e292b4f4e7d7bb7876b3a484605135feb0e/.tmp-config.v2.json437167503: no space left on device [INFO] checking guertinlab/seqOutBias against try#654bc80249a2b2ba8bd16392b5829d87ed96c92d for pr-136458 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file docs/seqOutBias_vignette.pdf [INFO] [stderr] fatal: cannot create directory at 'profile': No space left on device [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] checking guertinlab/seqOutBias against try#654bc80249a2b2ba8bd16392b5829d87ed96c92d for pr-136458 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file docs/seqOutBias_vignette.pdf [INFO] [stderr] fatal: cannot create directory at 'profile': No space left on device [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] checking guertinlab/seqOutBias against try#654bc80249a2b2ba8bd16392b5829d87ed96c92d for pr-136458 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file docs/seqOutBias_vignette.pdf [INFO] [stderr] fatal: cannot create directory at 'profile': No space left on device [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] checking guertinlab/seqOutBias against try#654bc80249a2b2ba8bd16392b5829d87ed96c92d for pr-136458 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2FseqOutBias" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file docs/seqOutBias_vignette.pdf [INFO] [stderr] fatal: cannot create directory at 'profile': No space left on device [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] failed to checkout https://github.com/guertinlab/seqOutBias Caused by: command failed: exit status: 128