[INFO] cloning repository https://github.com/zhanif3/701 [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/zhanif3/701" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzhanif3%2F701", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzhanif3%2F701'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 04144afb7cf245596996350a6d5f8fa6eed1b886 [INFO] checking zhanif3/701 against master#613bdd49978298648ed05ace086bd1ecad54b44a for pr-136458 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzhanif3%2F701" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/zhanif3/701 on toolchain 613bdd49978298648ed05ace086bd1ecad54b44a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+613bdd49978298648ed05ace086bd1ecad54b44a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/zhanif3/701 [INFO] finished tweaking git repo https://github.com/zhanif3/701 [INFO] tweaked toml for git repo https://github.com/zhanif3/701 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/zhanif3/701 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+613bdd49978298648ed05ace086bd1ecad54b44a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded tinytemplate v1.0.1 [INFO] [stderr] Downloaded bv v0.10.0 [INFO] [stderr] Downloaded multimap v0.4.0 [INFO] [stderr] Downloaded bio-types v0.5.1 [INFO] [stderr] Downloaded statrs v0.9.0 [INFO] [stderr] Downloaded bio v0.25.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:c80049f3b88b82089a44e0f06d0d6029d44b96b7257e55a1cd63dbc9f4c33334" "/opt/rustwide/cargo-home/bin/cargo" "+613bdd49978298648ed05ace086bd1ecad54b44a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 439dc0fcf3f9947e177527af0a0973e0d4bce34f9d7652102a80d784f2a7a78e [INFO] running `Command { std: "docker" "start" "-a" "439dc0fcf3f9947e177527af0a0973e0d4bce34f9d7652102a80d784f2a7a78e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "439dc0fcf3f9947e177527af0a0973e0d4bce34f9d7652102a80d784f2a7a78e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "439dc0fcf3f9947e177527af0a0973e0d4bce34f9d7652102a80d784f2a7a78e", kill_on_drop: false }` [INFO] [stdout] 439dc0fcf3f9947e177527af0a0973e0d4bce34f9d7652102a80d784f2a7a78e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:c80049f3b88b82089a44e0f06d0d6029d44b96b7257e55a1cd63dbc9f4c33334" "/opt/rustwide/cargo-home/bin/cargo" "+613bdd49978298648ed05ace086bd1ecad54b44a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ada1f03d639f1cc898dce121011d6f008711f7b83371b104377f8fbe7794ef6f [INFO] running `Command { std: "docker" "start" "-a" "ada1f03d639f1cc898dce121011d6f008711f7b83371b104377f8fbe7794ef6f", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.53 [INFO] [stderr] Compiling proc-macro2 v0.4.28 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling syn v0.15.33 [INFO] [stderr] Compiling serde v1.0.90 [INFO] [stderr] Compiling num-traits v0.2.6 [INFO] [stderr] Compiling memchr v2.2.0 [INFO] [stderr] Checking lazy_static v1.3.0 [INFO] [stderr] Compiling byteorder v1.3.1 [INFO] [stderr] Compiling ryu v0.2.7 [INFO] [stderr] Checking either v1.5.2 [INFO] [stderr] Compiling arrayvec v0.4.10 [INFO] [stderr] Checking nodrop v0.1.13 [INFO] [stderr] Checking cfg-if v0.1.7 [INFO] [stderr] Checking crossbeam-utils v0.2.2 [INFO] [stderr] Checking memoffset v0.2.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking itoa v0.4.3 [INFO] [stderr] Compiling quote v0.6.12 [INFO] [stderr] Checking scopeguard v0.3.3 [INFO] [stderr] Compiling rayon-core v1.4.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling regex v1.1.6 [INFO] [stderr] Checking ucd-util v0.1.3 [INFO] [stderr] Compiling num-complex v0.2.1 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking regex-syntax v0.6.6 [INFO] [stderr] Checking aho-corasick v0.7.3 [INFO] [stderr] Checking csv-core v0.1.5 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking crossbeam-epoch v0.3.1 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Checking num_cpus v1.10.0 [INFO] [stderr] Checking rand v0.4.6 [INFO] [stderr] Checking thread_local v0.3.6 [INFO] [stderr] Checking utf8-ranges v1.0.2 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Compiling autocfg v0.1.2 [INFO] [stderr] Compiling num-integer v0.1.39 [INFO] [stderr] Compiling rayon v1.0.3 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Checking crossbeam-deque v0.2.0 [INFO] [stderr] Compiling bincode v1.1.3 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Compiling bio v0.25.0 [INFO] [stderr] Checking bit-vec v0.5.1 [INFO] [stderr] Checking quick-error v1.2.2 [INFO] [stderr] Checking bit-set v0.5.1 [INFO] [stderr] Checking rand v0.3.23 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking statrs v0.9.0 [INFO] [stderr] Checking ordered-float v1.0.2 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking bytecount v0.3.2 [INFO] [stderr] Checking fnv v1.0.6 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking rand_core v0.4.0 [INFO] [stderr] Checking unicode-width v0.1.5 [INFO] [stderr] Checking itertools v0.8.0 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Checking cast v0.2.2 [INFO] [stderr] Checking rand_core v0.3.1 [INFO] [stderr] Checking bitflags v1.0.4 [INFO] [stderr] Checking same-file v1.0.4 [INFO] [stderr] Checking rand_xoshiro v0.1.0 [INFO] [stderr] Checking clap v2.33.0 [INFO] [stderr] Checking walkdir v2.2.7 [INFO] [stderr] Checking rand_os v0.1.3 [INFO] [stderr] Checking criterion-plot v0.3.1 [INFO] [stderr] Checking atty v0.2.11 [INFO] [stderr] Compiling serde_derive v1.0.90 [INFO] [stderr] Checking csv v1.0.7 [INFO] [stderr] Checking vec_map v0.8.1 [INFO] [stderr] Checking multimap v0.4.0 [INFO] [stderr] Checking bio-types v0.5.1 [INFO] [stderr] Checking serde_json v1.0.39 [INFO] [stderr] Checking tinytemplate v1.0.1 [INFO] [stderr] Checking criterion v0.2.11 [INFO] [stderr] Checking bwt v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `crate::types::Suffix` [INFO] [stdout] --> src/common/search.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use crate::types::Suffix; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::suffix_array` [INFO] [stdout] --> src/common/search.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::suffix_array; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::types::Suffix` [INFO] [stdout] --> src/common/search.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use crate::types::Suffix; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::suffix_array` [INFO] [stdout] --> src/common/search.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::suffix_array; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around assigned value [INFO] [stdout] --> src/common/search.rs:36:31 [INFO] [stdout] | [INFO] [stdout] 36 | let offset_char = ((first_rows.first().unwrap().1).0); [INFO] [stdout] | ^ ^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_parens)]` on by default [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 36 - let offset_char = ((first_rows.first().unwrap().1).0); [INFO] [stdout] 36 + let offset_char = (first_rows.first().unwrap().1).0; [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::iter::IntoParallelRefIterator` [INFO] [stdout] --> src/common/suffix_array.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use rayon::iter::IntoParallelRefIterator; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead`, `BufReader`, and `Result` [INFO] [stdout] --> src/common/suffix_array.rs:12:15 [INFO] [stdout] | [INFO] [stdout] 12 | use std::io::{BufRead, BufReader, Result}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ ^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around assigned value [INFO] [stdout] --> src/common/search.rs:36:31 [INFO] [stdout] | [INFO] [stdout] 36 | let offset_char = ((first_rows.first().unwrap().1).0); [INFO] [stdout] | ^ ^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_parens)]` on by default [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 36 - let offset_char = ((first_rows.first().unwrap().1).0); [INFO] [stdout] 36 + let offset_char = (first_rows.first().unwrap().1).0; [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::iter::IntoParallelRefIterator` [INFO] [stdout] --> src/common/suffix_array.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use rayon::iter::IntoParallelRefIterator; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Duration` [INFO] [stdout] --> src/common/suffix_array.rs:14:17 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::{Duration, SystemTime}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead`, `BufReader`, and `Result` [INFO] [stdout] --> src/common/suffix_array.rs:12:15 [INFO] [stdout] | [INFO] [stdout] 12 | use std::io::{BufRead, BufReader, Result}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ ^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Duration` [INFO] [stdout] --> src/common/suffix_array.rs:14:17 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::{Duration, SystemTime}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `cargo-clippy` [INFO] [stdout] --> src/common/suffix_array.rs:17:10 [INFO] [stdout] | [INFO] [stdout] 17 | #[derive(Serialize, Deserialize, PartialEq, Debug)] [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: no expected values for `feature` [INFO] [stdout] = note: using a cfg inside a derive macro will use the cfgs from the destination crate and not the ones from the defining crate [INFO] [stdout] = help: try referring to `Serialize` crate for guidance on how handle this unexpected cfg [INFO] [stdout] = help: the derive macro `Serialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] = note: `#[warn(unexpected_cfgs)]` on by default [INFO] [stdout] = note: this warning originates in the derive macro `Serialize` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `cargo-clippy` [INFO] [stdout] --> src/common/suffix_array.rs:17:10 [INFO] [stdout] | [INFO] [stdout] 17 | #[derive(Serialize, Deserialize, PartialEq, Debug)] [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: no expected values for `feature` [INFO] [stdout] = note: using a cfg inside a derive macro will use the cfgs from the destination crate and not the ones from the defining crate [INFO] [stdout] = help: try referring to `Serialize` crate for guidance on how handle this unexpected cfg [INFO] [stdout] = help: the derive macro `Serialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] = note: `#[warn(unexpected_cfgs)]` on by default [INFO] [stdout] = note: this warning originates in the derive macro `Serialize` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `cargo-clippy` [INFO] [stdout] --> src/common/suffix_array.rs:17:21 [INFO] [stdout] | [INFO] [stdout] 17 | #[derive(Serialize, Deserialize, PartialEq, Debug)] [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: no expected values for `feature` [INFO] [stdout] = note: using a cfg inside a derive macro will use the cfgs from the destination crate and not the ones from the defining crate [INFO] [stdout] = help: try referring to `Deserialize` crate for guidance on how handle this unexpected cfg [INFO] [stdout] = help: the derive macro `Deserialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] = note: this warning originates in the derive macro `Deserialize` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around type [INFO] [stdout] --> src/common/suffix_array.rs:45:20 [INFO] [stdout] | [INFO] [stdout] 45 | let mut s: Vec<(Suffix)> = (0 .. t.len()).map(|x: usize| { [INFO] [stdout] | ^ ^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 45 - let mut s: Vec<(Suffix)> = (0 .. t.len()).map(|x: usize| { [INFO] [stdout] 45 + let mut s: Vec = (0 .. t.len()).map(|x: usize| { [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: `#[macro_use]` only has an effect on `extern crate` and modules [INFO] [stdout] --> src/common/search.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_attributes)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `cargo-clippy` [INFO] [stdout] --> src/common/suffix_array.rs:17:21 [INFO] [stdout] | [INFO] [stdout] 17 | #[derive(Serialize, Deserialize, PartialEq, Debug)] [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: no expected values for `feature` [INFO] [stdout] = note: using a cfg inside a derive macro will use the cfgs from the destination crate and not the ones from the defining crate [INFO] [stdout] = help: try referring to `Deserialize` crate for guidance on how handle this unexpected cfg [INFO] [stdout] = help: the derive macro `Deserialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] = note: this warning originates in the derive macro `Deserialize` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unnecessary parentheses around type [INFO] [stdout] --> src/common/suffix_array.rs:45:20 [INFO] [stdout] | [INFO] [stdout] 45 | let mut s: Vec<(Suffix)> = (0 .. t.len()).map(|x: usize| { [INFO] [stdout] | ^ ^ [INFO] [stdout] | [INFO] [stdout] help: remove these parentheses [INFO] [stdout] | [INFO] [stdout] 45 - let mut s: Vec<(Suffix)> = (0 .. t.len()).map(|x: usize| { [INFO] [stdout] 45 + let mut s: Vec = (0 .. t.len()).map(|x: usize| { [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: `#[macro_use]` only has an effect on `extern crate` and modules [INFO] [stdout] --> src/common/search.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_attributes)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `start` [INFO] [stdout] --> src/common/search.rs:45:13 [INFO] [stdout] | [INFO] [stdout] 45 | let mut start: usize; [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_start` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `end` [INFO] [stdout] --> src/common/search.rs:46:13 [INFO] [stdout] | [INFO] [stdout] 46 | let mut end: usize; [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `x` [INFO] [stdout] --> src/common/search.rs:58:18 [INFO] [stdout] | [INFO] [stdout] 58 | Some(x) => (), [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_x` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `c` [INFO] [stdout] --> src/common/search.rs:64:26 [INFO] [stdout] | [INFO] [stdout] 64 | Some(c) => (), [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_c` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `elapsed` [INFO] [stdout] --> src/common/suffix_array.rs:49:12 [INFO] [stdout] | [INFO] [stdout] 49 | Ok(elapsed) => { [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_elapsed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/common/suffix_array.rs:53:13 [INFO] [stdout] | [INFO] [stdout] 53 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `elapsed` [INFO] [stdout] --> src/common/suffix_array.rs:63:12 [INFO] [stdout] | [INFO] [stdout] 63 | Ok(elapsed) => { [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_elapsed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/common/suffix_array.rs:67:13 [INFO] [stdout] | [INFO] [stdout] 67 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `i` [INFO] [stdout] --> src/common/suffix_array.rs:82:9 [INFO] [stdout] | [INFO] [stdout] 82 | for i in 0 .. index.len() { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_i` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `elapsed` [INFO] [stdout] --> src/common/suffix_array.rs:130:12 [INFO] [stdout] | [INFO] [stdout] 130 | Ok(elapsed) => { [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_elapsed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/common/suffix_array.rs:134:13 [INFO] [stdout] | [INFO] [stdout] 134 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `elapsed` [INFO] [stdout] --> src/common/suffix_array.rs:154:12 [INFO] [stdout] | [INFO] [stdout] 154 | Ok(elapsed) => { [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_elapsed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/common/suffix_array.rs:158:13 [INFO] [stdout] | [INFO] [stdout] 158 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `elapsed` [INFO] [stdout] --> src/common/suffix_array.rs:169:12 [INFO] [stdout] | [INFO] [stdout] 169 | Ok(elapsed) => { [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_elapsed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/common/suffix_array.rs:173:13 [INFO] [stdout] | [INFO] [stdout] 173 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `Counts` should have a snake case name [INFO] [stdout] --> src/common/search.rs:43:70 [INFO] [stdout] | [INFO] [stdout] 43 | pub fn search(query: &str, zipped: &Vec<(&Nucleotide, &Nucleotide)>, Counts: &HashMap) -> Option<(usize, usize)> { [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case (notice the capitalization): `counts` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `Counts` should have a snake case name [INFO] [stdout] --> src/common/search.rs:103:68 [INFO] [stdout] | [INFO] [stdout] 103 | fn get_pos_from_vec(rows: &Vec<&(&(char, usize), &(char, usize))>, Counts: &HashMap) -> Option<(usize, usize)> { [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case (notice the capitalization): `counts` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `L` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:20:9 [INFO] [stdout] | [INFO] [stdout] 20 | pub L: Vec, [INFO] [stdout] | ^ help: convert the identifier to snake case: `l` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `F` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:21:9 [INFO] [stdout] | [INFO] [stdout] 21 | pub F: Vec, // Character, [INFO] [stdout] | ^ help: convert the identifier to snake case (notice the capitalization): `f` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `Index` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:22:9 [INFO] [stdout] | [INFO] [stdout] 22 | pub Index: HashMap, [INFO] [stdout] | ^^^^^ help: convert the identifier to snake case (notice the capitalization): `index` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `FCounts` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:23:9 [INFO] [stdout] | [INFO] [stdout] 23 | pub FCounts: HashMap, [INFO] [stdout] | ^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `fcounts` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item [INFO] [stdout] --> src/common/suffix_array.rs:17:10 [INFO] [stdout] | [INFO] [stdout] 17 | #[derive(Serialize, Deserialize, PartialEq, Debug)] [INFO] [stdout] | ^-------- [INFO] [stdout] | | [INFO] [stdout] | `Serialize` is not local [INFO] [stdout] | move the `impl` block outside of this constant `_IMPL_SERIALIZE_FOR_LF` [INFO] [stdout] 18 | //#[derive(Debug)] [INFO] [stdout] 19 | pub struct LF { [INFO] [stdout] | -- `LF` is not local [INFO] [stdout] | [INFO] [stdout] = note: the derive macro `Serialize` defines the non-local `impl`, and may need to be changed [INFO] [stdout] = note: the derive macro `Serialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive` [INFO] [stdout] = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl` [INFO] [stdout] = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint [INFO] [stdout] = note: `#[warn(non_local_definitions)]` on by default [INFO] [stdout] = note: this warning originates in the derive macro `Serialize` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item [INFO] [stdout] --> src/common/suffix_array.rs:17:21 [INFO] [stdout] | [INFO] [stdout] 17 | #[derive(Serialize, Deserialize, PartialEq, Debug)] [INFO] [stdout] | ^---------- [INFO] [stdout] | | [INFO] [stdout] | `Deserialize` is not local [INFO] [stdout] | move the `impl` block outside of this constant `_IMPL_DESERIALIZE_FOR_LF` [INFO] [stdout] 18 | //#[derive(Debug)] [INFO] [stdout] 19 | pub struct LF { [INFO] [stdout] | -- `LF` is not local [INFO] [stdout] | [INFO] [stdout] = note: the derive macro `Deserialize` defines the non-local `impl`, and may need to be changed [INFO] [stdout] = note: the derive macro `Deserialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive` [INFO] [stdout] = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl` [INFO] [stdout] = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint [INFO] [stdout] = note: this warning originates in the derive macro `Deserialize` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `F` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:121:9 [INFO] [stdout] | [INFO] [stdout] 121 | let F: Vec = sa.iter().enumerate().map(|suffix| { [INFO] [stdout] | ^ help: convert the identifier to snake case (notice the capitalization): `f` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `L` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let L: Vec = sa.iter().map(|suffix| { [INFO] [stdout] | ^ help: convert the identifier to snake case: `l` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `Index` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:165:9 [INFO] [stdout] | [INFO] [stdout] 165 | let Index: HashMap = (0 .. t.len()).into_par_iter().map(|i| { [INFO] [stdout] | ^^^^^ help: convert the identifier to snake case (notice the capitalization): `index` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `start` [INFO] [stdout] --> src/common/search.rs:45:13 [INFO] [stdout] | [INFO] [stdout] 45 | let mut start: usize; [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_start` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `end` [INFO] [stdout] --> src/common/search.rs:46:13 [INFO] [stdout] | [INFO] [stdout] 46 | let mut end: usize; [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `x` [INFO] [stdout] --> src/common/search.rs:58:18 [INFO] [stdout] | [INFO] [stdout] 58 | Some(x) => (), [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_x` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `c` [INFO] [stdout] --> src/common/search.rs:64:26 [INFO] [stdout] | [INFO] [stdout] 64 | Some(c) => (), [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_c` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/main.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Deserialize` and `Serialize` [INFO] [stdout] --> src/bin/main.rs:5:13 [INFO] [stdout] | [INFO] [stdout] 5 | use serde::{Serialize, Deserialize}; [INFO] [stdout] | ^^^^^^^^^ ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io` [INFO] [stdout] --> src/bin/main.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::io; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Read` [INFO] [stdout] --> src/bin/main.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | use std::io::Read; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::iter::repeat` [INFO] [stdout] --> src/bin/main.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::iter::repeat; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/bin/main.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashSet` [INFO] [stdout] --> src/bin/main.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use std::collections::HashSet; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::mem` [INFO] [stdout] --> src/bin/main.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::mem; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `IntoParallelRefMutIterator` [INFO] [stdout] --> src/bin/main.rs:20:44 [INFO] [stdout] | [INFO] [stdout] 20 | use rayon::iter::{IntoParallelRefIterator, IntoParallelRefMutIterator}; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Duration` [INFO] [stdout] --> src/bin/main.rs:23:17 [INFO] [stdout] | [INFO] [stdout] 23 | use std::time::{Duration, SystemTime}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/all_in_one.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io` [INFO] [stdout] --> src/bin/all_in_one.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::io; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Read` [INFO] [stdout] --> src/bin/all_in_one.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | use std::io::Read; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::fs::File` [INFO] [stdout] --> src/bin/all_in_one.rs:11:5 [INFO] [stdout] | [INFO] [stdout] 11 | use std::fs::File; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::prelude::*` [INFO] [stdout] --> src/bin/all_in_one.rs:12:5 [INFO] [stdout] | [INFO] [stdout] 12 | use std::io::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::iter::repeat` [INFO] [stdout] --> src/bin/all_in_one.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::iter::repeat; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/bin/all_in_one.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashSet` [INFO] [stdout] --> src/bin/all_in_one.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use std::collections::HashSet; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::str` [INFO] [stdout] --> src/bin/all_in_one.rs:16:5 [INFO] [stdout] | [INFO] [stdout] 16 | use std::str; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::mem` [INFO] [stdout] --> src/bin/all_in_one.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::mem; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `IntoParallelRefMutIterator` [INFO] [stdout] --> src/bin/all_in_one.rs:20:44 [INFO] [stdout] | [INFO] [stdout] 20 | use rayon::iter::{IntoParallelRefIterator, IntoParallelRefMutIterator}; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Duration` [INFO] [stdout] --> src/bin/all_in_one.rs:23:17 [INFO] [stdout] | [INFO] [stdout] 23 | use std::time::{Duration, SystemTime}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/all_in_one.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io` [INFO] [stdout] --> src/bin/all_in_one.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::io; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Read` [INFO] [stdout] --> src/bin/all_in_one.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | use std::io::Read; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::fs::File` [INFO] [stdout] --> src/bin/all_in_one.rs:11:5 [INFO] [stdout] | [INFO] [stdout] 11 | use std::fs::File; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::prelude::*` [INFO] [stdout] --> src/bin/all_in_one.rs:12:5 [INFO] [stdout] | [INFO] [stdout] 12 | use std::io::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::iter::repeat` [INFO] [stdout] --> src/bin/all_in_one.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::iter::repeat; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/bin/all_in_one.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashSet` [INFO] [stdout] --> src/bin/all_in_one.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use std::collections::HashSet; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::str` [INFO] [stdout] --> src/bin/all_in_one.rs:16:5 [INFO] [stdout] | [INFO] [stdout] 16 | use std::str; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::mem` [INFO] [stdout] --> src/bin/all_in_one.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::mem; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `IntoParallelRefMutIterator` [INFO] [stdout] --> src/bin/all_in_one.rs:20:44 [INFO] [stdout] | [INFO] [stdout] 20 | use rayon::iter::{IntoParallelRefIterator, IntoParallelRefMutIterator}; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Duration` [INFO] [stdout] --> src/bin/all_in_one.rs:23:17 [INFO] [stdout] | [INFO] [stdout] 23 | use std::time::{Duration, SystemTime}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `elapsed` [INFO] [stdout] --> src/common/suffix_array.rs:49:12 [INFO] [stdout] | [INFO] [stdout] 49 | Ok(elapsed) => { [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_elapsed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/common/suffix_array.rs:53:13 [INFO] [stdout] | [INFO] [stdout] 53 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `elapsed` [INFO] [stdout] --> src/common/suffix_array.rs:63:12 [INFO] [stdout] | [INFO] [stdout] 63 | Ok(elapsed) => { [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_elapsed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/common/suffix_array.rs:67:13 [INFO] [stdout] | [INFO] [stdout] 67 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `i` [INFO] [stdout] --> src/common/suffix_array.rs:82:9 [INFO] [stdout] | [INFO] [stdout] 82 | for i in 0 .. index.len() { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_i` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/bin/all_in_one.rs:45:13 [INFO] [stdout] | [INFO] [stdout] 45 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/bin/all_in_one.rs:58:13 [INFO] [stdout] | [INFO] [stdout] 58 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `original_string` [INFO] [stdout] --> src/bin/all_in_one.rs:64:9 [INFO] [stdout] | [INFO] [stdout] 64 | let original_string = common::suffix_array::reverse_bwt(&lf.Index); [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_original_string` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/bin/all_in_one.rs:75:13 [INFO] [stdout] | [INFO] [stdout] 75 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/all_in_one.rs:35:9 [INFO] [stdout] | [INFO] [stdout] 35 | let T = file_contents.as_str(); [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `elapsed` [INFO] [stdout] --> src/common/suffix_array.rs:130:12 [INFO] [stdout] | [INFO] [stdout] 130 | Ok(elapsed) => { [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_elapsed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/common/suffix_array.rs:134:13 [INFO] [stdout] | [INFO] [stdout] 134 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `elapsed` [INFO] [stdout] --> src/common/suffix_array.rs:154:12 [INFO] [stdout] | [INFO] [stdout] 154 | Ok(elapsed) => { [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_elapsed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/common/suffix_array.rs:158:13 [INFO] [stdout] | [INFO] [stdout] 158 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `elapsed` [INFO] [stdout] --> src/common/suffix_array.rs:169:12 [INFO] [stdout] | [INFO] [stdout] 169 | Ok(elapsed) => { [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_elapsed` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/common/suffix_array.rs:173:13 [INFO] [stdout] | [INFO] [stdout] 173 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `test_search_capabilities_partial` is never used [INFO] [stdout] --> src/common/search.rs:189:8 [INFO] [stdout] | [INFO] [stdout] 189 | fn test_search_capabilities_partial() { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `Counts` should have a snake case name [INFO] [stdout] --> src/common/search.rs:43:70 [INFO] [stdout] | [INFO] [stdout] 43 | pub fn search(query: &str, zipped: &Vec<(&Nucleotide, &Nucleotide)>, Counts: &HashMap) -> Option<(usize, usize)> { [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case (notice the capitalization): `counts` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `Counts` should have a snake case name [INFO] [stdout] --> src/common/search.rs:103:68 [INFO] [stdout] | [INFO] [stdout] 103 | fn get_pos_from_vec(rows: &Vec<&(&(char, usize), &(char, usize))>, Counts: &HashMap) -> Option<(usize, usize)> { [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case (notice the capitalization): `counts` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/common/search.rs:134:13 [INFO] [stdout] | [INFO] [stdout] 134 | let T = "ABAABA$"; [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/common/search.rs:146:13 [INFO] [stdout] | [INFO] [stdout] 146 | let T = "ABAABA$"; [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/common/search.rs:158:13 [INFO] [stdout] | [INFO] [stdout] 158 | let T = "ABAABA$"; [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/common/search.rs:169:13 [INFO] [stdout] | [INFO] [stdout] 169 | let T = "ABAABA$"; [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/common/search.rs:180:13 [INFO] [stdout] | [INFO] [stdout] 180 | let T = "ABAABA$"; [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/common/search.rs:190:13 [INFO] [stdout] | [INFO] [stdout] 190 | let T = "ABAABA$"; [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `L` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:20:9 [INFO] [stdout] | [INFO] [stdout] 20 | pub L: Vec, [INFO] [stdout] | ^ help: convert the identifier to snake case: `l` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `F` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:21:9 [INFO] [stdout] | [INFO] [stdout] 21 | pub F: Vec, // Character, [INFO] [stdout] | ^ help: convert the identifier to snake case (notice the capitalization): `f` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `Index` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:22:9 [INFO] [stdout] | [INFO] [stdout] 22 | pub Index: HashMap, [INFO] [stdout] | ^^^^^ help: convert the identifier to snake case (notice the capitalization): `index` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: structure field `FCounts` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:23:9 [INFO] [stdout] | [INFO] [stdout] 23 | pub FCounts: HashMap, [INFO] [stdout] | ^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `fcounts` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item [INFO] [stdout] --> src/common/suffix_array.rs:17:10 [INFO] [stdout] | [INFO] [stdout] 17 | #[derive(Serialize, Deserialize, PartialEq, Debug)] [INFO] [stdout] | ^-------- [INFO] [stdout] | | [INFO] [stdout] | `Serialize` is not local [INFO] [stdout] | move the `impl` block outside of this constant `_IMPL_SERIALIZE_FOR_LF` [INFO] [stdout] 18 | //#[derive(Debug)] [INFO] [stdout] 19 | pub struct LF { [INFO] [stdout] | -- `LF` is not local [INFO] [stdout] | [INFO] [stdout] = note: the derive macro `Serialize` defines the non-local `impl`, and may need to be changed [INFO] [stdout] = note: the derive macro `Serialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive` [INFO] [stdout] = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl` [INFO] [stdout] = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint [INFO] [stdout] = note: `#[warn(non_local_definitions)]` on by default [INFO] [stdout] = note: this warning originates in the derive macro `Serialize` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item [INFO] [stdout] --> src/common/suffix_array.rs:17:21 [INFO] [stdout] | [INFO] [stdout] 17 | #[derive(Serialize, Deserialize, PartialEq, Debug)] [INFO] [stdout] | ^---------- [INFO] [stdout] | | [INFO] [stdout] | `Deserialize` is not local [INFO] [stdout] | move the `impl` block outside of this constant `_IMPL_DESERIALIZE_FOR_LF` [INFO] [stdout] 18 | //#[derive(Debug)] [INFO] [stdout] 19 | pub struct LF { [INFO] [stdout] | -- `LF` is not local [INFO] [stdout] | [INFO] [stdout] = note: the derive macro `Deserialize` defines the non-local `impl`, and may need to be changed [INFO] [stdout] = note: the derive macro `Deserialize` may come from an old version of the `serde_derive` crate, try updating your dependency with `cargo update -p serde_derive` [INFO] [stdout] = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl` [INFO] [stdout] = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint [INFO] [stdout] = note: this warning originates in the derive macro `Deserialize` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `F` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:121:9 [INFO] [stdout] | [INFO] [stdout] 121 | let F: Vec = sa.iter().enumerate().map(|suffix| { [INFO] [stdout] | ^ help: convert the identifier to snake case (notice the capitalization): `f` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `L` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let L: Vec = sa.iter().map(|suffix| { [INFO] [stdout] | ^ help: convert the identifier to snake case: `l` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `Index` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:165:9 [INFO] [stdout] | [INFO] [stdout] 165 | let Index: HashMap = (0 .. t.len()).into_par_iter().map(|i| { [INFO] [stdout] | ^^^^^ help: convert the identifier to snake case (notice the capitalization): `index` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:200:13 [INFO] [stdout] | [INFO] [stdout] 200 | let T = "ABAABA$"; [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/common/suffix_array.rs:210:13 [INFO] [stdout] | [INFO] [stdout] 210 | let T = "ABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABAABA$"; [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `original_string` [INFO] [stdout] --> src/bin/main.rs:80:9 [INFO] [stdout] | [INFO] [stdout] 80 | let original_string = common::suffix_array::reverse_bwt(&lf.Index); [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_original_string` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `g` [INFO] [stdout] --> src/bin/main.rs:108:9 [INFO] [stdout] | [INFO] [stdout] 108 | let g = bincode::serialize_into(&mut lf_buffer, &lf); [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `suffix_strings` [INFO] [stdout] --> src/bin/main.rs:131:9 [INFO] [stdout] | [INFO] [stdout] 131 | let suffix_strings: Vec<&str> = (positions.1).iter().map(|x| { [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_suffix_strings` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `IntoParallelRefMutIterator` [INFO] [stdout] --> src/benches/my_benchmark.rs:9:44 [INFO] [stdout] | [INFO] [stdout] 9 | use rayon::iter::{IntoParallelRefIterator, IntoParallelRefMutIterator}; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::sync::Arc` [INFO] [stdout] --> src/benches/my_benchmark.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::sync::Arc; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/main.rs:36:9 [INFO] [stdout] | [INFO] [stdout] 36 | let T = file_contents.as_str(); [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/bwt_rosalind.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/bin/all_in_one.rs:45:13 [INFO] [stdout] | [INFO] [stdout] 45 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/bin/all_in_one.rs:58:13 [INFO] [stdout] | [INFO] [stdout] 58 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `original_string` [INFO] [stdout] --> src/bin/all_in_one.rs:64:9 [INFO] [stdout] | [INFO] [stdout] 64 | let original_string = common::suffix_array::reverse_bwt(&lf.Index); [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_original_string` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/bin/all_in_one.rs:75:13 [INFO] [stdout] | [INFO] [stdout] 75 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::io; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::prelude::*` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:12:5 [INFO] [stdout] | [INFO] [stdout] 12 | use std::io::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::iter::repeat` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::iter::repeat; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashSet` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use std::collections::HashSet; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::mem` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::mem; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `IntoParallelRefIterator` and `IntoParallelRefMutIterator` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:20:19 [INFO] [stdout] | [INFO] [stdout] 20 | use rayon::iter::{IntoParallelRefIterator, IntoParallelRefMutIterator}; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Duration` and `SystemTime` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:23:17 [INFO] [stdout] | [INFO] [stdout] 23 | use std::time::{Duration, SystemTime}; [INFO] [stdout] | ^^^^^^^^ ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/all_in_one.rs:35:9 [INFO] [stdout] | [INFO] [stdout] 35 | let T = file_contents.as_str(); [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/main.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Deserialize` and `Serialize` [INFO] [stdout] --> src/bin/main.rs:5:13 [INFO] [stdout] | [INFO] [stdout] 5 | use serde::{Serialize, Deserialize}; [INFO] [stdout] | ^^^^^^^^^ ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io` [INFO] [stdout] --> src/bin/main.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::io; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Read` [INFO] [stdout] --> src/bin/main.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | use std::io::Read; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::iter::repeat` [INFO] [stdout] --> src/bin/main.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::iter::repeat; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/bin/main.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashSet` [INFO] [stdout] --> src/bin/main.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use std::collections::HashSet; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::mem` [INFO] [stdout] --> src/bin/main.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::mem; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `IntoParallelRefMutIterator` [INFO] [stdout] --> src/bin/main.rs:20:44 [INFO] [stdout] | [INFO] [stdout] 20 | use rayon::iter::{IntoParallelRefIterator, IntoParallelRefMutIterator}; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Duration` [INFO] [stdout] --> src/bin/main.rs:23:17 [INFO] [stdout] | [INFO] [stdout] 23 | use std::time::{Duration, SystemTime}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/bwt_rosalind.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::io; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::prelude::*` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:12:5 [INFO] [stdout] | [INFO] [stdout] 12 | use std::io::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::iter::repeat` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::iter::repeat; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashSet` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use std::collections::HashSet; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::mem` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:18:5 [INFO] [stdout] | [INFO] [stdout] 18 | use std::mem; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `IntoParallelRefIterator` and `IntoParallelRefMutIterator` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:20:19 [INFO] [stdout] | [INFO] [stdout] 20 | use rayon::iter::{IntoParallelRefIterator, IntoParallelRefMutIterator}; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Duration` and `SystemTime` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:23:17 [INFO] [stdout] | [INFO] [stdout] 23 | use std::time::{Duration, SystemTime}; [INFO] [stdout] | ^^^^^^^^ ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/bin/main.rs:109:5 [INFO] [stdout] | [INFO] [stdout] 109 | lf_buffer.flush(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 109 | let _ = lf_buffer.flush(); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/search_client.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io` [INFO] [stdout] --> src/bin/search_client.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use std::io; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Read` [INFO] [stdout] --> src/bin/search_client.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::Read; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::fs::File` [INFO] [stdout] --> src/bin/search_client.rs:6:5 [INFO] [stdout] | [INFO] [stdout] 6 | use std::fs::File; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::prelude::*` [INFO] [stdout] --> src/bin/search_client.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use std::io::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::iter::repeat` [INFO] [stdout] --> src/bin/search_client.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use std::iter::repeat; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/bin/search_client.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashSet` [INFO] [stdout] --> src/bin/search_client.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | use std::collections::HashSet; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::str` [INFO] [stdout] --> src/bin/search_client.rs:11:5 [INFO] [stdout] | [INFO] [stdout] 11 | use std::str; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `IntoParallelRefMutIterator` [INFO] [stdout] --> src/bin/search_client.rs:16:44 [INFO] [stdout] | [INFO] [stdout] 16 | use rayon::iter::{IntoParallelRefIterator, IntoParallelRefMutIterator}; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `fibonacci` is never used [INFO] [stdout] --> src/benches/my_benchmark.rs:20:4 [INFO] [stdout] | [INFO] [stdout] 20 | fn fibonacci(n: u64) -> u64 { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `criterion_benchmark` is never used [INFO] [stdout] --> src/benches/my_benchmark.rs:28:4 [INFO] [stdout] | [INFO] [stdout] 28 | fn criterion_benchmark(c: &mut Criterion) { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `sa_benchmark` is never used [INFO] [stdout] --> src/benches/my_benchmark.rs:32:4 [INFO] [stdout] | [INFO] [stdout] 32 | fn sa_benchmark(c: &mut Criterion) { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `reverse_benchmark` is never used [INFO] [stdout] --> src/benches/my_benchmark.rs:60:4 [INFO] [stdout] | [INFO] [stdout] 60 | fn reverse_benchmark(c: &mut Criterion) { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `parallel_search_benchmark` is never used [INFO] [stdout] --> src/benches/my_benchmark.rs:94:4 [INFO] [stdout] | [INFO] [stdout] 94 | fn parallel_search_benchmark(c: &mut Criterion) { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `sarr_benchmark` is never used [INFO] [stdout] --> src/benches/my_benchmark.rs:107:4 [INFO] [stdout] | [INFO] [stdout] 107 | fn sarr_benchmark(c: &mut Criterion) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/benches/my_benchmark.rs:62:9 [INFO] [stdout] | [INFO] [stdout] 62 | let T = file_contents.as_str(); [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/benches/my_benchmark.rs:76:9 [INFO] [stdout] | [INFO] [stdout] 76 | let T = file_contents.as_str(); [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/bin/search_client.rs:24:9 [INFO] [stdout] | [INFO] [stdout] 24 | let mut lf_buffer = fs::read("lf.bincode")?; [INFO] [stdout] | ----^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::io; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Read` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use std::io::Read; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::fs::File` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use std::fs::File; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::prelude::*` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:6:5 [INFO] [stdout] | [INFO] [stdout] 6 | use std::io::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::iter::repeat` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use std::iter::repeat; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashSet` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::collections::HashSet; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::str` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | use std::str; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::mem` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:12:5 [INFO] [stdout] | [INFO] [stdout] 12 | use std::mem; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::borrow::Borrow` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::borrow::Borrow; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Duration` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:15:17 [INFO] [stdout] | [INFO] [stdout] 15 | use std::time::{Duration, SystemTime}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: `#[macro_use]` only has an effect on `extern crate` and modules [INFO] [stdout] --> src/bin/comparative_benchmark.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_attributes)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `original_string` [INFO] [stdout] --> src/bin/main.rs:80:9 [INFO] [stdout] | [INFO] [stdout] 80 | let original_string = common::suffix_array::reverse_bwt(&lf.Index); [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_original_string` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `g` [INFO] [stdout] --> src/bin/main.rs:108:9 [INFO] [stdout] | [INFO] [stdout] 108 | let g = bincode::serialize_into(&mut lf_buffer, &lf); [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `suffix_strings` [INFO] [stdout] --> src/bin/main.rs:131:9 [INFO] [stdout] | [INFO] [stdout] 131 | let suffix_strings: Vec<&str> = (positions.1).iter().map(|x| { [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_suffix_strings` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::iter::IndexedParallelIterator` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:21:5 [INFO] [stdout] | [INFO] [stdout] 21 | use rayon::iter::IndexedParallelIterator; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::iter::ParallelIterator` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:22:5 [INFO] [stdout] | [INFO] [stdout] 22 | use rayon::iter::ParallelIterator; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `i` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:39:9 [INFO] [stdout] | [INFO] [stdout] 39 | for i in 0 .. index.len() { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_i` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::iter::IndexedParallelIterator` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:21:5 [INFO] [stdout] | [INFO] [stdout] 21 | use rayon::iter::IndexedParallelIterator; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::iter::ParallelIterator` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:22:5 [INFO] [stdout] | [INFO] [stdout] 22 | use rayon::iter::ParallelIterator; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `i` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:39:9 [INFO] [stdout] | [INFO] [stdout] 39 | for i in 0 .. index.len() { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_i` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `final_char` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:64:9 [INFO] [stdout] | [INFO] [stdout] 64 | let final_char = stripped.chars().last().expect("Something went wrong when getting the last character. Does the file have contents?"); [INFO] [stdout] | ^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_final_char` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `final_char` [INFO] [stdout] --> src/bin/bwt_rosalind.rs:64:9 [INFO] [stdout] | [INFO] [stdout] 64 | let final_char = stripped.chars().last().expect("Something went wrong when getting the last character. Does the file have contents?"); [INFO] [stdout] | ^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_final_char` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/bin/bwt_rosalind.rs:63:9 [INFO] [stdout] | [INFO] [stdout] 63 | let mut stripped = contents.replace('\n', ""); [INFO] [stdout] | ----^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/bin/bwt_rosalind.rs:63:9 [INFO] [stdout] | [INFO] [stdout] 63 | let mut stripped = contents.replace('\n', ""); [INFO] [stdout] | ----^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:70:19 [INFO] [stdout] | [INFO] [stdout] 70 | pub fn generate_l(T: &str) -> Vec { [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:57:13 [INFO] [stdout] | [INFO] [stdout] 57 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:74:13 [INFO] [stdout] | [INFO] [stdout] 74 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `L` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:73:9 [INFO] [stdout] | [INFO] [stdout] 73 | let L: Vec = T.as_bytes().iter().map(|c| { [INFO] [stdout] | ^ help: convert the identifier to snake case: `l` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:80:19 [INFO] [stdout] | [INFO] [stdout] 80 | pub fn generate_f(T: &str) -> Vec { [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `F` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:83:13 [INFO] [stdout] | [INFO] [stdout] 83 | let mut F: Vec = T.as_bytes().iter().map(|c| { [INFO] [stdout] | ^ help: convert the identifier to snake case (notice the capitalization): `f` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:101:9 [INFO] [stdout] | [INFO] [stdout] 101 | let T = file_contents.as_str(); [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `L` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:103:9 [INFO] [stdout] | [INFO] [stdout] 103 | let L = generate_l(&T); [INFO] [stdout] | ^ help: convert the identifier to snake case: `l` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `F` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:104:9 [INFO] [stdout] | [INFO] [stdout] 104 | let F = generate_f(&T); [INFO] [stdout] | ^ help: convert the identifier to snake case (notice the capitalization): `f` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `Index` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:106:9 [INFO] [stdout] | [INFO] [stdout] 106 | let Index: HashMap = (0..T.len()).map(|i| { [INFO] [stdout] | ^^^^^ help: convert the identifier to snake case (notice the capitalization): `index` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `ROSALIND_TEST_TRUE` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:125:8 [INFO] [stdout] | [INFO] [stdout] 125 | fn ROSALIND_TEST_TRUE() { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `rosalind_test_true` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:126:13 [INFO] [stdout] | [INFO] [stdout] 126 | let T = "TTCCTAACG$A"; [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `L` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:127:13 [INFO] [stdout] | [INFO] [stdout] 127 | let L = generate_l(&T); [INFO] [stdout] | ^ help: convert the identifier to snake case: `l` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `F` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:128:13 [INFO] [stdout] | [INFO] [stdout] 128 | let F = generate_f(&T); [INFO] [stdout] | ^ help: convert the identifier to snake case (notice the capitalization): `f` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `Index` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:129:13 [INFO] [stdout] | [INFO] [stdout] 129 | let Index: HashMap = (0..T.len()).map(|i| { [INFO] [stdout] | ^^^^^ help: convert the identifier to snake case (notice the capitalization): `index` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/search_client.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io` [INFO] [stdout] --> src/bin/search_client.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use std::io; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Read` [INFO] [stdout] --> src/bin/search_client.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::Read; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::fs::File` [INFO] [stdout] --> src/bin/search_client.rs:6:5 [INFO] [stdout] | [INFO] [stdout] 6 | use std::fs::File; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::prelude::*` [INFO] [stdout] --> src/bin/search_client.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use std::io::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::iter::repeat` [INFO] [stdout] --> src/bin/search_client.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use std::iter::repeat; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/bin/search_client.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashSet` [INFO] [stdout] --> src/bin/search_client.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | use std::collections::HashSet; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::str` [INFO] [stdout] --> src/bin/search_client.rs:11:5 [INFO] [stdout] | [INFO] [stdout] 11 | use std::str; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `IntoParallelRefMutIterator` [INFO] [stdout] --> src/bin/search_client.rs:16:44 [INFO] [stdout] | [INFO] [stdout] 16 | use rayon::iter::{IntoParallelRefIterator, IntoParallelRefMutIterator}; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:70:19 [INFO] [stdout] | [INFO] [stdout] 70 | pub fn generate_l(T: &str) -> Vec { [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/main.rs:36:9 [INFO] [stdout] | [INFO] [stdout] 36 | let T = file_contents.as_str(); [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `L` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:73:9 [INFO] [stdout] | [INFO] [stdout] 73 | let L: Vec = T.as_bytes().iter().map(|c| { [INFO] [stdout] | ^ help: convert the identifier to snake case: `l` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/comparative_benchmark.rs:45:9 [INFO] [stdout] | [INFO] [stdout] 45 | let T = file_contents.as_str(); [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:80:19 [INFO] [stdout] | [INFO] [stdout] 80 | pub fn generate_f(T: &str) -> Vec { [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `F` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:83:13 [INFO] [stdout] | [INFO] [stdout] 83 | let mut F: Vec = T.as_bytes().iter().map(|c| { [INFO] [stdout] | ^ help: convert the identifier to snake case (notice the capitalization): `f` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:101:9 [INFO] [stdout] | [INFO] [stdout] 101 | let T = file_contents.as_str(); [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `L` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:103:9 [INFO] [stdout] | [INFO] [stdout] 103 | let L = generate_l(&T); [INFO] [stdout] | ^ help: convert the identifier to snake case: `l` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `F` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:104:9 [INFO] [stdout] | [INFO] [stdout] 104 | let F = generate_f(&T); [INFO] [stdout] | ^ help: convert the identifier to snake case (notice the capitalization): `f` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `Index` should have a snake case name [INFO] [stdout] --> src/bin/bwt_rosalind.rs:106:9 [INFO] [stdout] | [INFO] [stdout] 106 | let Index: HashMap = (0..T.len()).map(|i| { [INFO] [stdout] | ^^^^^ help: convert the identifier to snake case (notice the capitalization): `index` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/bin/main.rs:109:5 [INFO] [stdout] | [INFO] [stdout] 109 | lf_buffer.flush(); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 109 | let _ = lf_buffer.flush(); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::io; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/bin/search_client.rs:24:9 [INFO] [stdout] | [INFO] [stdout] 24 | let mut lf_buffer = fs::read("lf.bincode")?; [INFO] [stdout] | ----^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::Read` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use std::io::Read; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::fs::File` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use std::fs::File; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::io::prelude::*` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:6:5 [INFO] [stdout] | [INFO] [stdout] 6 | use std::io::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::iter::repeat` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:7:5 [INFO] [stdout] | [INFO] [stdout] 7 | use std::iter::repeat; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashSet` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::collections::HashSet; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::str` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | use std::str; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::mem` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:12:5 [INFO] [stdout] | [INFO] [stdout] 12 | use std::mem; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::borrow::Borrow` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::borrow::Borrow; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Duration` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:15:17 [INFO] [stdout] | [INFO] [stdout] 15 | use std::time::{Duration, SystemTime}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: `#[macro_use]` only has an effect on `extern crate` and modules [INFO] [stdout] --> src/bin/comparative_benchmark.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use] [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_attributes)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:57:13 [INFO] [stdout] | [INFO] [stdout] 57 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `e` [INFO] [stdout] --> src/bin/comparative_benchmark.rs:74:13 [INFO] [stdout] | [INFO] [stdout] 74 | Err(e) => { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_e` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `T` should have a snake case name [INFO] [stdout] --> src/bin/comparative_benchmark.rs:45:9 [INFO] [stdout] | [INFO] [stdout] 45 | let T = file_contents.as_str(); [INFO] [stdout] | ^ help: convert the identifier to snake case: `t` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 29.93s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: criterion v0.2.11 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1` [INFO] running `Command { std: "docker" "inspect" "ada1f03d639f1cc898dce121011d6f008711f7b83371b104377f8fbe7794ef6f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ada1f03d639f1cc898dce121011d6f008711f7b83371b104377f8fbe7794ef6f", kill_on_drop: false }` [INFO] [stdout] ada1f03d639f1cc898dce121011d6f008711f7b83371b104377f8fbe7794ef6f