[INFO] cloning repository https://github.com/JamesDingle/dwcpn-prochloro
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/JamesDingle/dwcpn-prochloro" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FJamesDingle%2Fdwcpn-prochloro", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FJamesDingle%2Fdwcpn-prochloro'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] e2d569c1e18b40d866db2a0663d8ed82591ee43e
[INFO] building JamesDingle/dwcpn-prochloro against master#ad211ced81509462cdfe4c29ed10f97279a0acae for pr-135216
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FJamesDingle%2Fdwcpn-prochloro" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/JamesDingle/dwcpn-prochloro on toolchain ad211ced81509462cdfe4c29ed10f97279a0acae
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad211ced81509462cdfe4c29ed10f97279a0acae" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/JamesDingle/dwcpn-prochloro
[INFO] finished tweaking git repo https://github.com/JamesDingle/dwcpn-prochloro
[INFO] tweaked toml for git repo https://github.com/JamesDingle/dwcpn-prochloro written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/JamesDingle/dwcpn-prochloro already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad211ced81509462cdfe4c29ed10f97279a0acae" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating git repository `https://github.com/JamesDingle/dwcpn`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]      Locking 1 package to latest compatible version
[INFO] [stderr]       Adding dwcpn v0.1.0 (https://github.com/JamesDingle/dwcpn?branch=main#89ecab1d)
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded hdf5-sys v0.8.1
[INFO] [stderr]   Downloaded netcdf v0.7.0
[INFO] [stderr]   Downloaded clap v3.1.8
[INFO] [stderr]   Downloaded netcdf-sys v0.4.0
[INFO] [stderr]   Downloaded ndarray v0.15.4
[INFO] [stderr]   Downloaded libz-sys v1.1.5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+ad211ced81509462cdfe4c29ed10f97279a0acae" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 5bb576db2f450836ffaff5fcbcec218e7761557c00abdf6442311b8246c119b5
[INFO] running `Command { std: "docker" "start" "-a" "5bb576db2f450836ffaff5fcbcec218e7761557c00abdf6442311b8246c119b5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5bb576db2f450836ffaff5fcbcec218e7761557c00abdf6442311b8246c119b5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5bb576db2f450836ffaff5fcbcec218e7761557c00abdf6442311b8246c119b5", kill_on_drop: false }`
[INFO] [stdout] 5bb576db2f450836ffaff5fcbcec218e7761557c00abdf6442311b8246c119b5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+ad211ced81509462cdfe4c29ed10f97279a0acae" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] ddae19fb617c933b20f1b16a55a1b0a2a3ac456accb2802cf115ed197676276b
[INFO] running `Command { std: "docker" "start" "-a" "ddae19fb617c933b20f1b16a55a1b0a2a3ac456accb2802cf115ed197676276b", kill_on_drop: false }`
[INFO] [stderr]    Compiling memchr v2.4.1
[INFO] [stderr]    Compiling autocfg v1.1.0
[INFO] [stderr]    Compiling libc v0.2.121
[INFO] [stderr]    Compiling pkg-config v0.3.25
[INFO] [stderr]    Compiling regex-syntax v0.6.25
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling cc v1.0.73
[INFO] [stderr]    Compiling netcdf-sys v0.4.0
[INFO] [stderr]    Compiling once_cell v1.10.0
[INFO] [stderr]    Compiling hashbrown v0.11.2
[INFO] [stderr]    Compiling textwrap v0.15.0
[INFO] [stderr]    Compiling termcolor v1.1.3
[INFO] [stderr]    Compiling number_prefix v0.4.0
[INFO] [stderr]    Compiling matrixmultiply v0.3.2
[INFO] [stderr]    Compiling dwcpn v0.1.0 (https://github.com/JamesDingle/dwcpn?branch=main#89ecab1d)
[INFO] [stderr]    Compiling libloading v0.7.3
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling indexmap v1.8.1
[INFO] [stderr]    Compiling libz-sys v1.1.5
[INFO] [stderr]    Compiling aho-corasick v0.7.18
[INFO] [stderr]    Compiling os_str_bytes v6.0.0
[INFO] [stderr]    Compiling terminal_size v0.1.17
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling console v0.15.0
[INFO] [stderr]    Compiling clap v3.1.8
[INFO] [stderr]    Compiling num-complex v0.4.0
[INFO] [stderr]    Compiling ndarray v0.15.4
[INFO] [stderr]    Compiling regex v1.5.5
[INFO] [stderr]    Compiling indicatif v0.16.2
[INFO] [stderr]    Compiling hdf5-sys v0.8.1
[INFO] [stderr]    Compiling netcdf v0.7.0
[INFO] [stderr]    Compiling pp_lib_example v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: LC_ALL="C" PATH="/opt/rustwide/rustup-home/toolchains/ad211ced81509462cdfe4c29ed10f97279a0acae/lib/rustlib/x86_64-unknown-linux-gnu/bin:/opt/rustwide/rustup-home/toolchains/ad211ced81509462cdfe4c29ed10f97279a0acae/lib/rustlib/x86_64-unknown-linux-gnu/bin/self-contained:/opt/rustwide/cargo-home/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustcKxDCcf/symbols.o" "<10 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libnetcdf-98219ecf658af8ba.rlib,libnetcdf_sys-21bf8fb33f4d2394.rlib,libhdf5_sys-97ac78a8788bb0c3.rlib,libndarray-f3ba758386aa7e12.rlib,libmatrixmultiply-45e1f22b92a23964.rlib,libnum_complex-49bf9b26d5db4b64.rlib,libnum_integer-d4a24fb04036ede3.rlib,libnum_traits-8bc92ae7ef547700.rlib,librawpointer-a726d041f28ef5ec.rlib,libclap-c5555757556a4e77.rlib,libstrsim-d620f0ade87b0f1f.rlib,libatty-41cc71b182dc939a.rlib,libtermcolor-3421dff75a1a6c35.rlib,libtextwrap-d4e5dbd11df5deb0.rlib,libindexmap-22450027ab3c0c5f.rlib,libhashbrown-6be3a3b5258097e1.rlib,libos_str_bytes-ef75e081e1f9e918.rlib,libbitflags-e2b4db6c651223da.rlib,libindicatif-9f93642adfb439a9.rlib,liblazy_static-2bb390fee0230a38.rlib,libregex-cef29258c4430c5c.rlib,libaho_corasick-21bd349b22863601.rlib,libmemchr-f79915562e969c92.rlib,libregex_syntax-a8b7a392e3a16251.rlib,libconsole-fe647663921e164f.rlib,libterminal_size-2892f702d8fe74c4.rlib,liblibc-48c5dabae0b8d573.rlib,libonce_cell-f2975474530e33fc.rlib,libnumber_prefix-8479f39d71e80d3e.rlib,libdwcpn-ccbd3f77a125c714.rlib}" "/opt/rustwide/rustup-home/toolchains/ad211ced81509462cdfe4c29ed10f97279a0acae/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-d6f1d924b2f4233e.rlib,libpanic_unwind-00eb06e39850f679.rlib,libobject-d0382f11baa011b6.rlib,libmemchr-b7e2e2c1a7e4643d.rlib,libaddr2line-30ced7f1999cfa29.rlib,libgimli-3ee7e14c58e31ebd.rlib,librustc_demangle-a4f649bba77ffcc5.rlib,libstd_detect-c89a3ce7ad7c3dbd.rlib,libhashbrown-e1ce1d3d110c6707.rlib,librustc_std_workspace_alloc-e0604fecbf0f39dc.rlib,libminiz_oxide-0a9c6172f04822cc.rlib,libadler2-14a33f7117abcee7.rlib,libunwind-24c16adbe5e57356.rlib,libcfg_if-d2688d4a5c8e415b.rlib,liblibc-8ff7ba6d97853f27.rlib,liballoc-5c001d095eb077ec.rlib,librustc_std_workspace_core-395a38b8e0851c9b.rlib,libcore-d453bab70303062c.rlib,libcompiler_builtins-dd545221bb4f4734.rlib}" "-Wl,-Bdynamic" "-lnetcdf" "-lhdf5" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-B/opt/rustwide/rustup-home/toolchains/ad211ced81509462cdfe4c29ed10f97279a0acae/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/usr/lib/x86_64-linux-gnu/hdf5/serial" "-L" "/opt/rustwide/rustup-home/toolchains/ad211ced81509462cdfe4c29ed10f97279a0acae/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/pp_lib_example-7ea67dd2a5116eb7" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: rust-lld: error: unable to find library -lnetcdf
[INFO] [stdout]           collect2: error: ld returned 1 exit status
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `pp_lib_example` (bin "pp_lib_example") due to 1 previous error
[INFO] running `Command { std: "docker" "inspect" "ddae19fb617c933b20f1b16a55a1b0a2a3ac456accb2802cf115ed197676276b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ddae19fb617c933b20f1b16a55a1b0a2a3ac456accb2802cf115ed197676276b", kill_on_drop: false }`
[INFO] [stdout] ddae19fb617c933b20f1b16a55a1b0a2a3ac456accb2802cf115ed197676276b
