[INFO] cloning repository https://github.com/FynnFreyer/accord-rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/FynnFreyer/accord-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FFynnFreyer%2Faccord-rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FFynnFreyer%2Faccord-rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] aaa793c3dd565eb74b70f00474776abc4d3077a8
[INFO] building FynnFreyer/accord-rs against try#334963c956d25708feab489a3816ae63f639355d for pr-135216
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FFynnFreyer%2Faccord-rs" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/FynnFreyer/accord-rs on toolchain 334963c956d25708feab489a3816ae63f639355d
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+334963c956d25708feab489a3816ae63f639355d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/FynnFreyer/accord-rs
[INFO] finished tweaking git repo https://github.com/FynnFreyer/accord-rs
[INFO] tweaked toml for git repo https://github.com/FynnFreyer/accord-rs written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] crate git repo https://github.com/FynnFreyer/accord-rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+334963c956d25708feab489a3816ae63f639355d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+334963c956d25708feab489a3816ae63f639355d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] a0ddf5fcbb1187fbd26e26f73d3f9bc43f5955c87620fcb0ac8129662108ca0a
[INFO] running `Command { std: "docker" "start" "-a" "a0ddf5fcbb1187fbd26e26f73d3f9bc43f5955c87620fcb0ac8129662108ca0a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a0ddf5fcbb1187fbd26e26f73d3f9bc43f5955c87620fcb0ac8129662108ca0a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a0ddf5fcbb1187fbd26e26f73d3f9bc43f5955c87620fcb0ac8129662108ca0a", kill_on_drop: false }`
[INFO] [stdout] a0ddf5fcbb1187fbd26e26f73d3f9bc43f5955c87620fcb0ac8129662108ca0a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+334963c956d25708feab489a3816ae63f639355d" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4325356a39b6ac521df286e8426709afaf3ece4bde27f9e92ea7e7aca1e7b385
[INFO] running `Command { std: "docker" "start" "-a" "4325356a39b6ac521df286e8426709afaf3ece4bde27f9e92ea7e7aca1e7b385", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.160
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[INFO] [stderr]    Compiling cmake v0.1.51
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[INFO] [stderr]    Compiling curl-sys v0.4.77+curl-8.10.1
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling hts-sys v2.1.4
[INFO] [stderr]    Compiling libz-sys v1.1.20
[INFO] [stderr]    Compiling regex-automata v0.4.8
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling thiserror-impl v1.0.64
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling clap_derive v4.5.18
[INFO] [stderr]    Compiling regex v1.11.0
[INFO] [stderr]    Compiling bio-types v1.0.4
[INFO] [stderr]    Compiling clap v4.5.20
[INFO] [stderr]    Compiling pyo3-macros v0.22.5
[INFO] [stderr]    Compiling rust-htslib v0.46.0
[INFO] [stderr]    Compiling accord-rs v0.0.2 (/opt/rustwide/workdir)
[INFO] [stdout] warning: struct `App` is never constructed
[INFO] [stdout]  --> src/accord/app.rs:8:12
[INFO] [stdout]   |
[INFO] [stdout] 8 | pub struct App;
[INFO] [stdout]   |            ^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function `main` is never used
[INFO] [stdout]   --> src/accord/app.rs:11:12
[INFO] [stdout]    |
[INFO] [stdout] 10 | impl App {
[INFO] [stdout]    | -------- associated function in this implementation
[INFO] [stdout] 11 |     pub fn main() {
[INFO] [stdout]    |            ^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function `parse_args` is never used
[INFO] [stdout]   --> src/accord/cli.rs:25:12
[INFO] [stdout]    |
[INFO] [stdout] 24 | impl Args {
[INFO] [stdout]    | --------- associated function in this implementation
[INFO] [stdout] 25 |     pub fn parse_args() -> Self {
[INFO] [stdout]    |            ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `write_file` is never used
[INFO] [stdout]  --> src/accord/utils.rs:8:8
[INFO] [stdout]   |
[INFO] [stdout] 8 | pub fn write_file(content: &String, path: &str) -> () {
[INFO] [stdout]   |        ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `read_file` is never used
[INFO] [stdout]   --> src/accord/utils.rs:26:8
[INFO] [stdout]    |
[INFO] [stdout] 26 | pub fn read_file(path: &str) -> String {
[INFO] [stdout]    |        ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `get_fasta_seq` is never used
[INFO] [stdout]   --> src/accord/utils.rs:48:8
[INFO] [stdout]    |
[INFO] [stdout] 48 | pub fn get_fasta_seq(fasta_path: &String) -> Seq {
[INFO] [stdout]    |        ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 38s
[INFO] running `Command { std: "docker" "inspect" "4325356a39b6ac521df286e8426709afaf3ece4bde27f9e92ea7e7aca1e7b385", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4325356a39b6ac521df286e8426709afaf3ece4bde27f9e92ea7e7aca1e7b385", kill_on_drop: false }`
[INFO] [stdout] 4325356a39b6ac521df286e8426709afaf3ece4bde27f9e92ea7e7aca1e7b385
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+334963c956d25708feab489a3816ae63f639355d" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4615a035017ad50511f7537947337abbad91b388298b7bd1ee181b6a21c5cd28
[INFO] running `Command { std: "docker" "start" "-a" "4615a035017ad50511f7537947337abbad91b388298b7bd1ee181b6a21c5cd28", kill_on_drop: false }`
[INFO] [stderr]    Compiling accord-rs v0.0.2 (/opt/rustwide/workdir)
[INFO] [stdout] error[E0599]: no function or associated item named `from_file` found for struct `seq::Seq` in the current scope
[INFO] [stdout]    --> src/accord/data/seq.rs:181:29
[INFO] [stdout]     |
[INFO] [stdout] 13  | pub struct Seq {
[INFO] [stdout]     | -------------- function or associated item `from_file` not found for this struct
[INFO] [stdout] ...
[INFO] [stdout] 181 |         let mut seqs = Seq::from_file("assets/K03455.fasta");
[INFO] [stdout]     |                             ^^^^^^^^^ function or associated item not found in `seq::Seq`
[INFO] [stdout]     |
[INFO] [stdout] note: if you're trying to build a new `seq::Seq` consider using one of the following associated functions:
[INFO] [stdout]       seq::Seq::new
[INFO] [stdout]       seq::Seq::from_string
[INFO] [stdout]       seq::Seq::py_new
[INFO] [stdout]    --> src/accord/data/seq.rs:23:5
[INFO] [stdout]     |
[INFO] [stdout] 23  |     pub fn new(label: String, sequence: Vec<u8>) -> Self {
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 27  |     pub fn from_string(label: String, seq_string: String) -> Self {
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 81  |     fn py_new(label: String, sequence: String) -> Self {
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0599]: no function or associated item named `from_file` found for struct `seq::Seq` in the current scope
[INFO] [stdout]    --> src/accord/data/seq.rs:181:29
[INFO] [stdout]     |
[INFO] [stdout] 13  | pub struct Seq {
[INFO] [stdout]     | -------------- function or associated item `from_file` not found for this struct
[INFO] [stdout] ...
[INFO] [stdout] 181 |         let mut seqs = Seq::from_file("assets/K03455.fasta");
[INFO] [stdout]     |                             ^^^^^^^^^ function or associated item not found in `seq::Seq`
[INFO] [stdout]     |
[INFO] [stdout] note: if you're trying to build a new `seq::Seq` consider using one of the following associated functions:
[INFO] [stdout]       seq::Seq::new
[INFO] [stdout]       seq::Seq::from_string
[INFO] [stdout]       seq::Seq::py_new
[INFO] [stdout]    --> src/accord/data/seq.rs:23:5
[INFO] [stdout]     |
[INFO] [stdout] 23  |     pub fn new(label: String, sequence: Vec<u8>) -> Self {
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 27  |     pub fn from_string(label: String, seq_string: String) -> Self {
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 81  |     fn py_new(label: String, sequence: String) -> Self {
[INFO] [stdout]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] For more information about this error, try `rustc --explain E0599`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `accord-rs` (bin "accord" test) due to 1 previous error
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stdout] For more information about this error, try `rustc --explain E0599`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `accord-rs` (lib test) due to 1 previous error
[INFO] running `Command { std: "docker" "inspect" "4615a035017ad50511f7537947337abbad91b388298b7bd1ee181b6a21c5cd28", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4615a035017ad50511f7537947337abbad91b388298b7bd1ee181b6a21c5cd28", kill_on_drop: false }`
[INFO] [stdout] 4615a035017ad50511f7537947337abbad91b388298b7bd1ee181b6a21c5cd28
