[INFO] cloning repository https://github.com/Adoni5/cnv_from_bam
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Adoni5/cnv_from_bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAdoni5%2Fcnv_from_bam", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAdoni5%2Fcnv_from_bam'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 1fa01c617edc95a43ace2697cb798ba713d7837c
[INFO] building Adoni5/cnv_from_bam against master#ad211ced81509462cdfe4c29ed10f97279a0acae for pr-135216
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAdoni5%2Fcnv_from_bam" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/Adoni5/cnv_from_bam on toolchain ad211ced81509462cdfe4c29ed10f97279a0acae
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad211ced81509462cdfe4c29ed10f97279a0acae" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/Adoni5/cnv_from_bam
[INFO] finished tweaking git repo https://github.com/Adoni5/cnv_from_bam
[INFO] tweaked toml for git repo https://github.com/Adoni5/cnv_from_bam written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad211ced81509462cdfe4c29ed10f97279a0acae" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 90 packages to latest compatible versions
[INFO] [stderr]       Adding noodles v0.59.0 (available: v0.87.0)
[INFO] [stderr]       Adding noodles-bgzf v0.25.0 (available: v0.34.0)
[INFO] [stderr]       Adding pyo3 v0.20.3 (available: v0.23.3)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad211ced81509462cdfe4c29ed10f97279a0acae" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pyo3-build-config v0.20.3
[INFO] [stderr]   Downloaded unindent v0.2.3
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.20.3
[INFO] [stderr]   Downloaded pyo3-macros v0.20.3
[INFO] [stderr]   Downloaded noodles-core v0.12.0
[INFO] [stderr]   Downloaded noodles v0.59.0
[INFO] [stderr]   Downloaded natord v1.0.9
[INFO] [stderr]   Downloaded noodles-bgzf v0.25.0
[INFO] [stderr]   Downloaded noodles-csi v0.28.0
[INFO] [stderr]   Downloaded console v0.15.10
[INFO] [stderr]   Downloaded noodles-bam v0.51.0
[INFO] [stderr]   Downloaded pyo3-ffi v0.20.3
[INFO] [stderr]   Downloaded indicatif v0.17.9
[INFO] [stderr]   Downloaded libdeflater v1.23.0
[INFO] [stderr]   Downloaded portable-atomic v1.10.0
[INFO] [stderr]   Downloaded libdeflate-sys v1.23.0
[INFO] [stderr]   Downloaded unicode-width v0.2.0
[INFO] [stderr]   Downloaded pyo3 v0.20.3
[INFO] [stderr]   Downloaded noodles-sam v0.48.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+ad211ced81509462cdfe4c29ed10f97279a0acae" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d8d6737990fb5c065ea1597e1cbc33389571777717e0595faf1605e7c2cd3bce
[INFO] running `Command { std: "docker" "start" "-a" "d8d6737990fb5c065ea1597e1cbc33389571777717e0595faf1605e7c2cd3bce", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d8d6737990fb5c065ea1597e1cbc33389571777717e0595faf1605e7c2cd3bce", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d8d6737990fb5c065ea1597e1cbc33389571777717e0595faf1605e7c2cd3bce", kill_on_drop: false }`
[INFO] [stdout] d8d6737990fb5c065ea1597e1cbc33389571777717e0595faf1605e7c2cd3bce
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+ad211ced81509462cdfe4c29ed10f97279a0acae" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e2f6002d39c9cd8a2f23757e5622832e076faea631b960cb539eb506c400b4e4
[INFO] running `Command { std: "docker" "start" "-a" "e2f6002d39c9cd8a2f23757e5622832e076faea631b960cb539eb506c400b4e4", kill_on_drop: false }`
[INFO] [stderr]    Compiling target-lexicon v0.12.16
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]    Compiling libc v0.2.169
[INFO] [stderr]    Compiling shlex v1.3.0
[INFO] [stderr]    Compiling once_cell v1.20.2
[INFO] [stderr]    Compiling autocfg v1.4.0
[INFO] [stderr]    Compiling proc-macro2 v1.0.92
[INFO] [stderr]    Compiling adler2 v2.0.0
[INFO] [stderr]    Compiling parking_lot_core v0.9.10
[INFO] [stderr]    Compiling crc32fast v1.4.2
[INFO] [stderr]    Compiling smallvec v1.13.2
[INFO] [stderr]    Compiling unicode-ident v1.0.14
[INFO] [stderr]    Compiling equivalent v1.0.1
[INFO] [stderr]    Compiling hashbrown v0.15.2
[INFO] [stderr]    Compiling bytes v1.9.0
[INFO] [stderr]    Compiling lexical-util v0.8.5
[INFO] [stderr]    Compiling byteorder v1.5.0
[INFO] [stderr]    Compiling cc v1.2.7
[INFO] [stderr]    Compiling miniz_oxide v0.8.2
[INFO] [stderr]    Compiling bitflags v2.6.0
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling rayon-core v1.12.1
[INFO] [stderr]    Compiling cfg_aliases v0.2.1
[INFO] [stderr]    Compiling portable-atomic v1.10.0
[INFO] [stderr]    Compiling noodles-core v0.12.0
[INFO] [stderr]    Compiling nix v0.29.0
[INFO] [stderr]    Compiling flate2 v1.0.35
[INFO] [stderr]    Compiling indexmap v2.7.0
[INFO] [stderr]    Compiling scopeguard v1.2.0
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling memchr v2.7.4
[INFO] [stderr]    Compiling lock_api v0.4.12
[INFO] [stderr]    Compiling lexical-parse-integer v0.8.6
[INFO] [stderr]    Compiling lexical-write-integer v0.8.5
[INFO] [stderr]    Compiling crossbeam-channel v0.5.14
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.18
[INFO] [stderr]    Compiling memoffset v0.9.1
[INFO] [stderr]    Compiling unicode-width v0.2.0
[INFO] [stderr]    Compiling lexical-parse-float v0.8.5
[INFO] [stderr]    Compiling quote v1.0.38
[INFO] [stderr]    Compiling lexical-write-float v0.8.5
[INFO] [stderr]    Compiling crossbeam-deque v0.8.6
[INFO] [stderr]    Compiling pyo3-build-config v0.20.3
[INFO] [stderr]    Compiling either v1.13.0
[INFO] [stderr]    Compiling unindent v0.2.3
[INFO] [stderr]    Compiling indoc v2.0.5
[INFO] [stderr]    Compiling syn v2.0.95
[INFO] [stderr]    Compiling log v0.4.22
[INFO] [stderr]    Compiling natord v1.0.9
[INFO] [stderr]    Compiling lexical-core v0.8.5
[INFO] [stderr]    Compiling libdeflate-sys v1.23.0
[INFO] [stderr]    Compiling rayon v1.10.0
[INFO] [stderr]    Compiling parking_lot v0.12.3
[INFO] [stderr]    Compiling console v0.15.10
[INFO] [stderr]    Compiling pyo3-ffi v0.20.3
[INFO] [stderr]    Compiling pyo3 v0.20.3
[INFO] [stderr]    Compiling ctrlc v3.4.5
[INFO] [stderr]    Compiling indicatif v0.17.9
[INFO] [stderr]    Compiling libdeflater v1.23.0
[INFO] [stderr]    Compiling noodles-bgzf v0.25.0
[INFO] [stderr]    Compiling noodles-csi v0.28.0
[INFO] [stderr]    Compiling pyo3-macros-backend v0.20.3
[INFO] [stderr]    Compiling noodles-sam v0.48.0
[INFO] [stderr]    Compiling noodles-bam v0.51.0
[INFO] [stderr]    Compiling pyo3-macros v0.20.3
[INFO] [stderr]    Compiling noodles v0.59.0
[INFO] [stderr]    Compiling cnv_from_bam v0.4.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 18.33s
[INFO] running `Command { std: "docker" "inspect" "e2f6002d39c9cd8a2f23757e5622832e076faea631b960cb539eb506c400b4e4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e2f6002d39c9cd8a2f23757e5622832e076faea631b960cb539eb506c400b4e4", kill_on_drop: false }`
[INFO] [stdout] e2f6002d39c9cd8a2f23757e5622832e076faea631b960cb539eb506c400b4e4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+ad211ced81509462cdfe4c29ed10f97279a0acae" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] f6cd53aed26cb98158733e67cccff0a85aacf24f2ca7b2d0bd56536c6962f35e
[INFO] running `Command { std: "docker" "start" "-a" "f6cd53aed26cb98158733e67cccff0a85aacf24f2ca7b2d0bd56536c6962f35e", kill_on_drop: false }`
[INFO] [stderr]    Compiling cnv_from_bam v0.4.4 (/opt/rustwide/workdir)
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: LC_ALL="C" PATH="/opt/rustwide/rustup-home/toolchains/ad211ced81509462cdfe4c29ed10f97279a0acae/lib/rustlib/x86_64-unknown-linux-gnu/bin:/opt/rustwide/rustup-home/toolchains/ad211ced81509462cdfe4c29ed10f97279a0acae/lib/rustlib/x86_64-unknown-linux-gnu/bin/self-contained:/opt/rustwide/cargo-home/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustcpQC2KQ/symbols.o" "<17 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libctrlc-b7b1c1691e339a25.rlib,libnix-bca253de28dba54c.rlib}" "/opt/rustwide/rustup-home/toolchains/ad211ced81509462cdfe4c29ed10f97279a0acae/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libtest-1af8ffea9e74232a.rlib,libgetopts-ffa5d4ded57a3fc3.rlib,libunicode_width-0e164d63496cbdb2.rlib,librustc_std_workspace_std-aef6a43b187ae7c5.rlib}" "/opt/rustwide/target/debug/deps/{libpyo3-1fc7535cd6dfc7aa.rlib,libmemoffset-5862bc42ea74e6e0.rlib,libparking_lot-ceccc195f5f12227.rlib,liblock_api-0fd539a479e0f355.rlib,libscopeguard-d52bd00767847e44.rlib,libpyo3_ffi-dc74d312f1661f0e.rlib,libunindent-df02e22db51b2e3a.rlib,libnoodles-248054eae683e4bc.rlib,libnoodles_bam-59738eebbb074cea.rlib,libnoodles_sam-0c823de3ce2d7eba.rlib,libbitflags-ce446ee600bbaa5e.rlib,liblexical_core-bb7f8308cd47c250.rlib,liblexical_write_float-f28d831dea1374f0.rlib,liblexical_write_integer-4169f685a5b43473.rlib,liblexical_parse_float-71e5575da9c17735.rlib,liblexical_parse_integer-31a6c439aab2a50a.rlib,liblexical_util-c8c7361009d21904.rlib,libstatic_assertions-d53a9977dc6e27e5.rlib,libmemchr-3ffe5f7a52883367.rlib,libnoodles_csi-b639a92abeba02e9.rlib,libbit_vec-ed82a54abc6c00ad.rlib,libnoodles_core-e764afe1a72606d0.rlib,libnoodles_bgzf-623d055c4c24d6f3.rlib,liblibdeflater-a74209790411cda8.rlib,liblibdeflate_sys-c6c1c16ad407254a.rlib,libflate2-b7d1e3004c16af06.rlib,libminiz_oxide-e502227085177f21.rlib,libadler2-b931b79841890bad.rlib,libcrc32fast-ec6b1847c42b19ed.rlib,libbytes-485c92da441bbc40.rlib,libcrossbeam_channel-b2c1401e59501778.rlib,libindexmap-9d6e30d92f98b401.rlib,libequivalent-fdc46004df91ad08.rlib,libhashbrown-19954401a582c725.rlib,libbyteorder-1efcbe4f07366651.rlib,libnatord-17df5b7ba74eac9e.rlib,liblog-5fb51f756c1191b0.rlib,libindicatif-d21274932ccf5292.rlib,libportable_atomic-1048f2c99f23cf64.rlib,librayon-3402c2a2c95873a3.rlib,librayon_core-b1e101548e9c00e5.rlib,libcrossbeam_deque-01de7023bef04d73.rlib,libcrossbeam_epoch-830ad52e7d30f47e.rlib,libcrossbeam_utils-6947cd7c51cb69a0.rlib,libeither-05c06c46adc2ac96.rlib,libnumber_prefix-8479f39d71e80d3e.rlib,libconsole-ce14e1b6cd1fa2a4.rlib,libunicode_width-79cfce0a776a55d3.rlib,libonce_cell-7f4555c21e0e7b4b.rlib,libparking_lot_core-adc56f73bc304579.rlib,liblibc-dccbd4dd90a02783.rlib,libcfg_if-33ef6c02a07f9fec.rlib,libsmallvec-8045c56aeb050430.rlib,libfnv-2d77ec4f6f971b24.rlib}" "/opt/rustwide/rustup-home/toolchains/ad211ced81509462cdfe4c29ed10f97279a0acae/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-d6f1d924b2f4233e.rlib,libpanic_unwind-00eb06e39850f679.rlib,libobject-d0382f11baa011b6.rlib,libmemchr-b7e2e2c1a7e4643d.rlib,libaddr2line-30ced7f1999cfa29.rlib,libgimli-3ee7e14c58e31ebd.rlib,librustc_demangle-a4f649bba77ffcc5.rlib,libstd_detect-c89a3ce7ad7c3dbd.rlib,libhashbrown-e1ce1d3d110c6707.rlib,librustc_std_workspace_alloc-e0604fecbf0f39dc.rlib,libminiz_oxide-0a9c6172f04822cc.rlib,libadler2-14a33f7117abcee7.rlib,libunwind-24c16adbe5e57356.rlib,libcfg_if-d2688d4a5c8e415b.rlib,liblibc-8ff7ba6d97853f27.rlib,liballoc-5c001d095eb077ec.rlib,librustc_std_workspace_core-395a38b8e0851c9b.rlib,libcore-d453bab70303062c.rlib,libcompiler_builtins-dd545221bb4f4734.rlib}" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-B/opt/rustwide/rustup-home/toolchains/ad211ced81509462cdfe4c29ed10f97279a0acae/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-457f94acea259a44/out/lib" "-L" "/opt/rustwide/rustup-home/toolchains/ad211ced81509462cdfe4c29ed10f97279a0acae/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/cnv_from_bam-3ad46cbc3c06754c" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: rust-lld: error: undefined symbol: PyBytes_AsString
[INFO] [stdout]           >>> referenced by bytes.rs:92 (src/types/bytes.rs:92)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.04.rcgu.o:(pyo3::types::bytes::PyBytes::as_bytes::h56649ffb4aef6fbd) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyBytes_Size
[INFO] [stdout]           >>> referenced by bytes.rs:93 (src/types/bytes.rs:93)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.04.rcgu.o:(pyo3::types::bytes::PyBytes::as_bytes::h56649ffb4aef6fbd) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_BaseException
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyBaseException$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::hb357952d3f9913f2) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_OSError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyOSError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::h4b1146442ffe8b70) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_RuntimeError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyRuntimeError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::h513f6076897d9ae3) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_SystemExit
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PySystemExit$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::h5d3f44d464acb7a4) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_TypeError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyTypeError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::heac15ad451367928) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_BlockingIOError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyBlockingIOError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::h308d82abe9563c74) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_BrokenPipeError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyBrokenPipeError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::h27a8f53ed793c36f) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_ConnectionAbortedError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyConnectionAbortedError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::h6be5f40e219f10d8) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_ConnectionRefusedError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyConnectionRefusedError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::h0a835265ff723e6f) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyErr_Fetch
[INFO] [stdout]           >>> referenced by mod.rs:277 (src/err/mod.rs:277)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.05.rcgu.o:(pyo3::err::PyErr::_take::hc915353e61ee2b0a) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           >>> referenced by err_state.rs:203 (src/err/err_state.rs:203)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.14.rcgu.o:(pyo3::err::err_state::lazy_into_normalized_ffi_tuple::h71e0fdd732b63b1d) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_ConnectionResetError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyConnectionResetError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::h7db67dff26c1914d) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_FileExistsError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyFileExistsError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::h1a1b8b5df80b3965) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_FileNotFoundError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyFileNotFoundError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::h24e89c79e182517c) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_InterruptedError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyInterruptedError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::hb780585ff9e01dc8) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_PermissionError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyPermissionError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::he709cf7dc9ec8702) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyErr_PrintEx
[INFO] [stdout]           >>> referenced by mod.rs:348 (src/err/mod.rs:348)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.05.rcgu.o:(pyo3::err::PyErr::print_panic_and_unwind::h0de341a45115d396) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyExc_TimeoutError
[INFO] [stdout]           >>> referenced by exceptions.rs:266 (src/exceptions.rs:266)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.00.rcgu.o:(_$LT$pyo3..exceptions..PyTimeoutError$u20$as$u20$pyo3..type_object..PyTypeInfo$GT$::type_object_raw::_$u7b$$u7b$closure$u7d$$u7d$::hfc085235f19e7485) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: undefined symbol: PyErr_NewExceptionWithDoc
[INFO] [stdout]           >>> referenced by mod.rs:421 (src/err/mod.rs:421)
[INFO] [stdout]           >>>               pyo3-1fc7535cd6dfc7aa.pyo3.639b553925f0f496-cgu.05.rcgu.o:(pyo3::err::PyErr::new_type::h5e93a910c8174daa) in archive /opt/rustwide/target/debug/deps/libpyo3-1fc7535cd6dfc7aa.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: too many errors emitted, stopping now (use --error-limit=0 to see all errors)
[INFO] [stdout]           collect2: error: ld returned 1 exit status
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `cnv_from_bam` (lib test) due to 1 previous error
[INFO] running `Command { std: "docker" "inspect" "f6cd53aed26cb98158733e67cccff0a85aacf24f2ca7b2d0bd56536c6962f35e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f6cd53aed26cb98158733e67cccff0a85aacf24f2ca7b2d0bd56536c6962f35e", kill_on_drop: false }`
[INFO] [stdout] f6cd53aed26cb98158733e67cccff0a85aacf24f2ca7b2d0bd56536c6962f35e
