[INFO] cloning repository https://github.com/naobservatory/kmer-egd [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/naobservatory/kmer-egd" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnaobservatory%2Fkmer-egd", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnaobservatory%2Fkmer-egd'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 0731f7caf61c3a5f042109627863edf4fb066da6 [INFO] building naobservatory/kmer-egd against try#9b5e8b16bd1c4acf4cf8e6880368314cf021a987+rustflags=-Dtail-expr-drop-order for pr-134523 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnaobservatory%2Fkmer-egd" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file rothman.unenriched.counts [INFO] [stderr] error: unable to write file rothman.unenriched.simple [INFO] [stderr] error: unable to write file rothman.unenriched_samples [INFO] [stderr] error: unable to write file run-iterative-assembler.sh [INFO] [stderr] error: unable to write file run-spike-in.sh [INFO] [stderr] error: unable to write file sars-cov-2.fasta [INFO] [stderr] error: unable to write file score-hash-output-parallel.sh [INFO] [stderr] error: unable to write file score-hash-output-single.sh [INFO] [stderr] error: unable to write file score-shm-output.sh [INFO] [stderr] error: unable to write file score-trie-output-parallel.sh [INFO] [stderr] error: unable to write file score-trie-output-single.sh [INFO] [stderr] error: unable to write file score-trie-output.sh [INFO] [stderr] error: unable to write file select-mod-lines.py [INFO] [stderr] error: unable to write file shm-common.h [INFO] [stderr] error: unable to write file shm-dump-all.c [INFO] [stderr] error: unable to write file shm-egd.c [INFO] [stderr] error: unable to write file shm-examples.c [INFO] [stderr] error: unable to write file shm-hist.c [INFO] [stderr] error: unable to write file simple-assemble.py [INFO] [stderr] error: unable to write file simple-sample.py [INFO] [stderr] error: unable to write file simplify_metadata.py [INFO] [stderr] error: unable to write file simulate-HTP.py [INFO] [stderr] error: unable to write file simulate-one-kmer.py [INFO] [stderr] error: unable to write file simulate-spikes.sh [INFO] [stderr] error: unable to write file ska-hash-count.cpp [INFO] [stderr] error: unable to write file sort-bucket-evaluations.sh [INFO] [stderr] error: unable to write file spike-in-growth.py [INFO] [stderr] error: unable to write file spike-pipeline.sh [INFO] [stderr] fatal: cannot create directory at 'src': No space left on device [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] building naobservatory/kmer-egd against try#9b5e8b16bd1c4acf4cf8e6880368314cf021a987+rustflags=-Dtail-expr-drop-order for pr-134523 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnaobservatory%2Fkmer-egd" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file rothman.unenriched.counts [INFO] [stderr] error: unable to write file rothman.unenriched.simple [INFO] [stderr] error: unable to write file rothman.unenriched_samples [INFO] [stderr] error: unable to write file run-iterative-assembler.sh [INFO] [stderr] error: unable to write file run-spike-in.sh [INFO] [stderr] error: unable to write file sars-cov-2.fasta [INFO] [stderr] error: unable to write file score-hash-output-parallel.sh [INFO] [stderr] error: unable to write file score-hash-output-single.sh [INFO] [stderr] error: unable to write file score-shm-output.sh [INFO] [stderr] error: unable to write file score-trie-output-parallel.sh [INFO] [stderr] error: unable to write file score-trie-output-single.sh [INFO] [stderr] error: unable to write file score-trie-output.sh [INFO] [stderr] error: unable to write file select-mod-lines.py [INFO] [stderr] error: unable to write file shm-common.h [INFO] [stderr] fatal: unable to checkout working tree [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] building naobservatory/kmer-egd against try#9b5e8b16bd1c4acf4cf8e6880368314cf021a987+rustflags=-Dtail-expr-drop-order for pr-134523 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnaobservatory%2Fkmer-egd" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file rothman.unenriched.counts [INFO] [stderr] error: unable to write file rothman.unenriched.simple [INFO] [stderr] error: unable to write file rothman.unenriched_samples [INFO] [stderr] error: unable to write file run-iterative-assembler.sh [INFO] [stderr] error: unable to write file run-spike-in.sh [INFO] [stderr] error: unable to write file sars-cov-2.fasta [INFO] [stderr] error: unable to write file score-hash-output-parallel.sh [INFO] [stderr] error: unable to write file score-hash-output-single.sh [INFO] [stderr] error: unable to write file score-shm-output.sh [INFO] [stderr] error: unable to write file score-trie-output-parallel.sh [INFO] [stderr] error: unable to write file score-trie-output-single.sh [INFO] [stderr] error: unable to write file score-trie-output.sh [INFO] [stderr] error: unable to write file select-mod-lines.py [INFO] [stderr] error: unable to write file shm-common.h [INFO] [stderr] error: unable to write file shm-dump-all.c [INFO] [stderr] error: unable to write file shm-egd.c [INFO] [stderr] error: unable to write file shm-examples.c [INFO] [stderr] error: unable to write file shm-hist.c [INFO] [stderr] error: unable to write file simple-assemble.py [INFO] [stderr] error: unable to write file simple-sample.py [INFO] [stderr] error: unable to write file simplify_metadata.py [INFO] [stderr] error: unable to write file simulate-HTP.py [INFO] [stderr] error: unable to write file simulate-one-kmer.py [INFO] [stderr] error: unable to write file simulate-spikes.sh [INFO] [stderr] error: unable to write file ska-hash-count.cpp [INFO] [stderr] error: unable to write file sort-bucket-evaluations.sh [INFO] [stderr] error: unable to write file spike-in-growth.py [INFO] [stderr] error: unable to write file spike-pipeline.sh [INFO] [stderr] fatal: cannot create directory at 'src': No space left on device [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] building naobservatory/kmer-egd against try#9b5e8b16bd1c4acf4cf8e6880368314cf021a987+rustflags=-Dtail-expr-drop-order for pr-134523 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnaobservatory%2Fkmer-egd" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/naobservatory/kmer-egd on toolchain 9b5e8b16bd1c4acf4cf8e6880368314cf021a987 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9b5e8b16bd1c4acf4cf8e6880368314cf021a987" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/naobservatory/kmer-egd [INFO] finished tweaking git repo https://github.com/naobservatory/kmer-egd [INFO] tweaked toml for git repo https://github.com/naobservatory/kmer-egd written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/naobservatory/kmer-egd already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9b5e8b16bd1c4acf4cf8e6880368314cf021a987" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+9b5e8b16bd1c4acf4cf8e6880368314cf021a987" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3ea60df2f6dd8106358897d51e3a64534e1599b9a4a194755db82d3bb3e1a600 [INFO] running `Command { std: "docker" "start" "-a" "3ea60df2f6dd8106358897d51e3a64534e1599b9a4a194755db82d3bb3e1a600", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3ea60df2f6dd8106358897d51e3a64534e1599b9a4a194755db82d3bb3e1a600", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3ea60df2f6dd8106358897d51e3a64534e1599b9a4a194755db82d3bb3e1a600", kill_on_drop: false }` [INFO] [stdout] 3ea60df2f6dd8106358897d51e3a64534e1599b9a4a194755db82d3bb3e1a600 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Dtail-expr-drop-order" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+9b5e8b16bd1c4acf4cf8e6880368314cf021a987" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] Error response from daemon: write /var/lib/docker/containers/79c002d82c0b1978589a691f99ed82c176c7c298bd4759006070907c011ceefe/.tmp-config.v2.json765344408: no space left on device