[INFO] cloning repository https://github.com/TuBieJun/stat_mut_sampleratio [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/TuBieJun/stat_mut_sampleratio" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTuBieJun%2Fstat_mut_sampleratio", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTuBieJun%2Fstat_mut_sampleratio'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 0163827d32c94da365c78519e8ce537f7b7a211c [INFO] building TuBieJun/stat_mut_sampleratio against master#11663cd3bfefef7d34e8f0892c250bf698049392+rustflags=-Dtail-expr-drop-order for pr-134523 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FTuBieJun%2Fstat_mut_sampleratio" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/TuBieJun/stat_mut_sampleratio on toolchain 11663cd3bfefef7d34e8f0892c250bf698049392 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+11663cd3bfefef7d34e8f0892c250bf698049392" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/TuBieJun/stat_mut_sampleratio [INFO] finished tweaking git repo https://github.com/TuBieJun/stat_mut_sampleratio [INFO] tweaked toml for git repo https://github.com/TuBieJun/stat_mut_sampleratio written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/TuBieJun/stat_mut_sampleratio already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+11663cd3bfefef7d34e8f0892c250bf698049392" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024 [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded ansi_term v0.10.2 [INFO] [stderr] Downloaded atty v0.2.6 [INFO] [stderr] Downloaded clap v2.29.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+11663cd3bfefef7d34e8f0892c250bf698049392" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 807ac5e91ebb664655cc808227fc7756f04d263c79e707f8e9c06f03f1b683a5 [INFO] running `Command { std: "docker" "start" "-a" "807ac5e91ebb664655cc808227fc7756f04d263c79e707f8e9c06f03f1b683a5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "807ac5e91ebb664655cc808227fc7756f04d263c79e707f8e9c06f03f1b683a5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "807ac5e91ebb664655cc808227fc7756f04d263c79e707f8e9c06f03f1b683a5", kill_on_drop: false }` [INFO] [stdout] 807ac5e91ebb664655cc808227fc7756f04d263c79e707f8e9c06f03f1b683a5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Dtail-expr-drop-order" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+11663cd3bfefef7d34e8f0892c250bf698049392" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f7b5fef38f88df9f18ec2864abd9f97c2ffaf514b15bd85715593dcd7b125d08 [INFO] running `Command { std: "docker" "start" "-a" "f7b5fef38f88df9f18ec2864abd9f97c2ffaf514b15bd85715593dcd7b125d08", kill_on_drop: false }` [INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024 [INFO] [stderr] Compiling unicode-width v0.1.4 [INFO] [stderr] Compiling libc v0.2.36 [INFO] [stderr] Compiling vec_map v0.8.0 [INFO] [stderr] Compiling bitflags v1.0.1 [INFO] [stderr] Compiling strsim v0.6.0 [INFO] [stderr] Compiling ansi_term v0.10.2 [INFO] [stderr] Compiling textwrap v0.9.0 [INFO] [stderr] Compiling atty v0.2.6 [INFO] [stderr] Compiling clap v2.29.2 [INFO] [stderr] Compiling stat_germline_pos v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `SubCommand` [INFO] [stdout] --> src/main.rs:9:22 [INFO] [stdout] | [INFO] [stdout] 9 | use clap::{Arg, App, SubCommand}; [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:18:9 [INFO] [stdout] | [INFO] [stdout] 18 | let mut f = File::open(vcf_l) [INFO] [stdout] | ----^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:40:21 [INFO] [stdout] | [INFO] [stdout] 40 | let mut dp_info:Vec<&str>; [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:58:25 [INFO] [stdout] | [INFO] [stdout] 58 | let mut n_index:usize; [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `D_germline` should have a snake case name [INFO] [stdout] --> src/main.rs:13:13 [INFO] [stdout] | [INFO] [stdout] 13 | D_germline:&mut HashMap>) -> u32 { [INFO] [stdout] | ^^^^^^^^^^ help: convert the identifier to snake case: `d_germline` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `D_germline` should have a snake case name [INFO] [stdout] --> src/main.rs:96:53 [INFO] [stdout] | [INFO] [stdout] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { [INFO] [stdout] | ^^^^^^^^^^ help: convert the identifier to snake case: `d_germline` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/main.rs:100:5 [INFO] [stdout] | [INFO] [stdout] 100 | writer.write(header.as_bytes()); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 100 | let _ = writer.write(header.as_bytes()); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/main.rs:112:9 [INFO] [stdout] | [INFO] [stdout] 112 | writer.write(info.as_bytes()); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 112 | let _ = writer.write(info.as_bytes()); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `D_germline` should have a snake case name [INFO] [stdout] --> src/main.rs:155:13 [INFO] [stdout] | [INFO] [stdout] 155 | let mut D_germline:HashMap> = HashMap::new(); [INFO] [stdout] | ^^^^^^^^^^ help: convert the identifier to snake case: `d_germline` [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2.27s [INFO] running `Command { std: "docker" "inspect" "f7b5fef38f88df9f18ec2864abd9f97c2ffaf514b15bd85715593dcd7b125d08", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f7b5fef38f88df9f18ec2864abd9f97c2ffaf514b15bd85715593dcd7b125d08", kill_on_drop: false }` [INFO] [stdout] f7b5fef38f88df9f18ec2864abd9f97c2ffaf514b15bd85715593dcd7b125d08 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Dtail-expr-drop-order" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+11663cd3bfefef7d34e8f0892c250bf698049392" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c5003701c4f5aad5464bb917377c673a01bab2207b70aa4a41e20b8e5b767433 [INFO] running `Command { std: "docker" "start" "-a" "c5003701c4f5aad5464bb917377c673a01bab2207b70aa4a41e20b8e5b767433", kill_on_drop: false }` [INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024 [INFO] [stderr] Compiling stat_germline_pos v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `SubCommand` [INFO] [stdout] --> src/main.rs:9:22 [INFO] [stdout] | [INFO] [stdout] 9 | use clap::{Arg, App, SubCommand}; [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:18:9 [INFO] [stdout] | [INFO] [stdout] 18 | let mut f = File::open(vcf_l) [INFO] [stdout] | ----^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:40:21 [INFO] [stdout] | [INFO] [stdout] 40 | let mut dp_info:Vec<&str>; [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:58:25 [INFO] [stdout] | [INFO] [stdout] 58 | let mut n_index:usize; [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `D_germline` should have a snake case name [INFO] [stdout] --> src/main.rs:13:13 [INFO] [stdout] | [INFO] [stdout] 13 | D_germline:&mut HashMap>) -> u32 { [INFO] [stdout] | ^^^^^^^^^^ help: convert the identifier to snake case: `d_germline` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `D_germline` should have a snake case name [INFO] [stdout] --> src/main.rs:96:53 [INFO] [stdout] | [INFO] [stdout] 96 | fn out_info(out_file:&str, panel_list:&Vec, D_germline:&HashMap>, sample_num_list:&Vec) { [INFO] [stdout] | ^^^^^^^^^^ help: convert the identifier to snake case: `d_germline` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/main.rs:100:5 [INFO] [stdout] | [INFO] [stdout] 100 | writer.write(header.as_bytes()); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 100 | let _ = writer.write(header.as_bytes()); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `Result` that must be used [INFO] [stdout] --> src/main.rs:112:9 [INFO] [stdout] | [INFO] [stdout] 112 | writer.write(info.as_bytes()); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] help: use `let _ = ...` to ignore the resulting value [INFO] [stdout] | [INFO] [stdout] 112 | let _ = writer.write(info.as_bytes()); [INFO] [stdout] | +++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `D_germline` should have a snake case name [INFO] [stdout] --> src/main.rs:155:13 [INFO] [stdout] | [INFO] [stdout] 155 | let mut D_germline:HashMap> = HashMap::new(); [INFO] [stdout] | ^^^^^^^^^^ help: convert the identifier to snake case: `d_germline` [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.11s [INFO] running `Command { std: "docker" "inspect" "c5003701c4f5aad5464bb917377c673a01bab2207b70aa4a41e20b8e5b767433", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c5003701c4f5aad5464bb917377c673a01bab2207b70aa4a41e20b8e5b767433", kill_on_drop: false }` [INFO] [stdout] c5003701c4f5aad5464bb917377c673a01bab2207b70aa4a41e20b8e5b767433