[INFO] cloning repository https://github.com/wheaton5/long_read_binner [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/wheaton5/long_read_binner" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Flong_read_binner", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Flong_read_binner'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] e72d4e667fc1c4e41b1616f1924744f0d4e76bd7 [INFO] checking wheaton5/long_read_binner against try#2277c63fa464d237b17b68d3b87f9fbb89e58a3e for pr-133570-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Flong_read_binner" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/wheaton5/long_read_binner on toolchain 2277c63fa464d237b17b68d3b87f9fbb89e58a3e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2277c63fa464d237b17b68d3b87f9fbb89e58a3e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/wheaton5/long_read_binner [INFO] finished tweaking git repo https://github.com/wheaton5/long_read_binner [INFO] tweaked toml for git repo https://github.com/wheaton5/long_read_binner written to /workspace/builds/worker-4-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/wheaton5/long_read_binner already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2277c63fa464d237b17b68d3b87f9fbb89e58a3e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024 [INFO] [stderr] Updating crates.io index [INFO] [stderr] Updating git repository `https://github.com/wheaton5/dna_io.git` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Locking 72 packages to latest compatible versions [INFO] [stderr] Adding aho-corasick v1.1.3 [INFO] [stderr] Downgrading ansi_term v0.11.0 -> v0.9.0 [INFO] [stderr] Adding bindgen v0.71.1 [INFO] [stderr] Adding bio-types v1.0.2 (available: v1.0.4) [INFO] [stderr] Adding bitflags v0.9.1 [INFO] [stderr] Adding bitflags v2.6.0 [INFO] [stderr] Adding boomphf v0.3.1 (https://github.com/10XGenomics/rust-boomphf?branch=master#56c3f192) [INFO] [stderr] Adding bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Updating cc v1.0.28 -> v1.2.4 [INFO] [stderr] Adding cexpr v0.6.0 [INFO] [stderr] Adding cfg-if v1.0.0 [INFO] [stderr] Adding clang-sys v1.8.1 [INFO] [stderr] Downgrading clap v2.32.0 -> v2.27.1 (available: v2.34.0) [INFO] [stderr] Adding custom_derive v0.1.7 [INFO] [stderr] Adding derive-new v0.5.9 [INFO] [stderr] Adding dna_io v0.1.0 (https://github.com/wheaton5/dna_io.git#a640f47b) [INFO] [stderr] Adding fs-utils v1.1.4 [INFO] [stderr] Adding glob v0.3.1 [INFO] [stderr] Adding heck v0.5.0 [INFO] [stderr] Adding idna v0.1.5 [INFO] [stderr] Adding ieee754 v0.2.6 [INFO] [stderr] Adding itertools v0.13.0 [INFO] [stderr] Adding lazy_static v0.2.11 [INFO] [stderr] Updating libc v0.2.48 -> v0.2.168 [INFO] [stderr] Adding libloading v0.8.6 [INFO] [stderr] Adding libz-sys v1.1.20 [INFO] [stderr] Adding linear-map v1.2.0 [INFO] [stderr] Adding lzma-sys v0.1.20 [INFO] [stderr] Adding matches v0.1.10 [INFO] [stderr] Adding memchr v2.7.4 [INFO] [stderr] Adding minimal-lexical v0.2.1 [INFO] [stderr] Adding newtype_derive v0.1.6 [INFO] [stderr] Adding nom v7.1.3 [INFO] [stderr] Adding percent-encoding v1.0.1 [INFO] [stderr] Adding pkg-config v0.3.31 [INFO] [stderr] Adding prettyplease v0.2.25 [INFO] [stderr] Adding proc-macro2 v1.0.92 [INFO] [stderr] Adding quick-error v1.2.3 [INFO] [stderr] Adding quote v1.0.37 [INFO] [stderr] Adding regex v1.11.1 [INFO] [stderr] Adding regex-automata v0.4.9 [INFO] [stderr] Adding regex-syntax v0.8.5 [INFO] [stderr] Adding rust-htslib v0.24.0 [INFO] [stderr] Adding rustc-hash v2.1.0 [INFO] [stderr] Adding rustc_version v0.1.7 [INFO] [stderr] Adding rustversion v1.0.18 [INFO] [stderr] Adding semver v0.1.20 [INFO] [stderr] Adding shlex v1.3.0 [INFO] [stderr] Downgrading strsim v0.7.0 -> v0.6.0 [INFO] [stderr] Adding strum_macros v0.26.4 [INFO] [stderr] Adding syn v1.0.109 [INFO] [stderr] Adding syn v2.0.90 [INFO] [stderr] Downgrading textwrap v0.10.0 -> v0.9.0 [INFO] [stderr] Adding thiserror v1.0.69 [INFO] [stderr] Adding thiserror-impl v1.0.69 [INFO] [stderr] Adding tinyvec v1.8.0 [INFO] [stderr] Adding tinyvec_macros v0.1.1 [INFO] [stderr] Adding unicode-bidi v0.3.17 [INFO] [stderr] Adding unicode-ident v1.0.14 [INFO] [stderr] Adding unicode-normalization v0.1.24 [INFO] [stderr] Adding url v1.7.2 [INFO] [stderr] Adding vcpkg v0.2.15 [INFO] [stderr] Adding windows-targets v0.52.6 [INFO] [stderr] Adding windows_aarch64_gnullvm v0.52.6 [INFO] [stderr] Adding windows_aarch64_msvc v0.52.6 [INFO] [stderr] Adding windows_i686_gnu v0.52.6 [INFO] [stderr] Adding windows_i686_gnullvm v0.52.6 [INFO] [stderr] Adding windows_i686_msvc v0.52.6 [INFO] [stderr] Adding windows_x86_64_gnu v0.52.6 [INFO] [stderr] Adding windows_x86_64_gnullvm v0.52.6 [INFO] [stderr] Adding windows_x86_64_msvc v0.52.6 [INFO] [stderr] Adding yaml-rust v0.3.5 [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] checking wheaton5/long_read_binner against try#2277c63fa464d237b17b68d3b87f9fbb89e58a3e for pr-133570-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Flong_read_binner" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/wheaton5/long_read_binner on toolchain 2277c63fa464d237b17b68d3b87f9fbb89e58a3e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2277c63fa464d237b17b68d3b87f9fbb89e58a3e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/wheaton5/long_read_binner [INFO] finished tweaking git repo https://github.com/wheaton5/long_read_binner [INFO] tweaked toml for git repo https://github.com/wheaton5/long_read_binner written to /workspace/builds/worker-4-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/wheaton5/long_read_binner already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2277c63fa464d237b17b68d3b87f9fbb89e58a3e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024 [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Updating git repository `https://github.com/wheaton5/dna_io.git` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Locking 72 packages to latest compatible versions [INFO] [stderr] Adding aho-corasick v1.1.3 [INFO] [stderr] Downgrading ansi_term v0.11.0 -> v0.9.0 [INFO] [stderr] Adding bindgen v0.71.1 [INFO] [stderr] Adding bio-types v1.0.2 (available: v1.0.4) [INFO] [stderr] Adding bitflags v0.9.1 [INFO] [stderr] Adding bitflags v2.6.0 [INFO] [stderr] Adding boomphf v0.3.1 (https://github.com/10XGenomics/rust-boomphf?branch=master#56c3f192) [INFO] [stderr] Adding bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Updating cc v1.0.28 -> v1.2.4 [INFO] [stderr] Adding cexpr v0.6.0 [INFO] [stderr] Adding cfg-if v1.0.0 [INFO] [stderr] Adding clang-sys v1.8.1 [INFO] [stderr] Downgrading clap v2.32.0 -> v2.27.1 (available: v2.34.0) [INFO] [stderr] Adding custom_derive v0.1.7 [INFO] [stderr] Adding derive-new v0.5.9 [INFO] [stderr] Adding dna_io v0.1.0 (https://github.com/wheaton5/dna_io.git#a640f47b) [INFO] [stderr] Adding fs-utils v1.1.4 [INFO] [stderr] Adding glob v0.3.1 [INFO] [stderr] Adding heck v0.5.0 [INFO] [stderr] Adding idna v0.1.5 [INFO] [stderr] Adding ieee754 v0.2.6 [INFO] [stderr] Adding itertools v0.13.0 [INFO] [stderr] Adding lazy_static v0.2.11 [INFO] [stderr] Updating libc v0.2.48 -> v0.2.168 [INFO] [stderr] Adding libloading v0.8.6 [INFO] [stderr] Adding libz-sys v1.1.20 [INFO] [stderr] Adding linear-map v1.2.0 [INFO] [stderr] Adding lzma-sys v0.1.20 [INFO] [stderr] Adding matches v0.1.10 [INFO] [stderr] Adding memchr v2.7.4 [INFO] [stderr] Adding minimal-lexical v0.2.1 [INFO] [stderr] Adding newtype_derive v0.1.6 [INFO] [stderr] Adding nom v7.1.3 [INFO] [stderr] Adding percent-encoding v1.0.1 [INFO] [stderr] Adding pkg-config v0.3.31 [INFO] [stderr] Adding prettyplease v0.2.25 [INFO] [stderr] Adding proc-macro2 v1.0.92 [INFO] [stderr] Adding quick-error v1.2.3 [INFO] [stderr] Adding quote v1.0.37 [INFO] [stderr] Adding regex v1.11.1 [INFO] [stderr] Adding regex-automata v0.4.9 [INFO] [stderr] Adding regex-syntax v0.8.5 [INFO] [stderr] Adding rust-htslib v0.24.0 [INFO] [stderr] Adding rustc-hash v2.1.0 [INFO] [stderr] Adding rustc_version v0.1.7 [INFO] [stderr] Adding rustversion v1.0.18 [INFO] [stderr] Adding semver v0.1.20 [INFO] [stderr] Adding shlex v1.3.0 [INFO] [stderr] Downgrading strsim v0.7.0 -> v0.6.0 [INFO] [stderr] Adding strum_macros v0.26.4 [INFO] [stderr] Adding syn v1.0.109 [INFO] [stderr] Adding syn v2.0.90 [INFO] [stderr] Downgrading textwrap v0.10.0 -> v0.9.0 [INFO] [stderr] Adding thiserror v1.0.69 [INFO] [stderr] Adding thiserror-impl v1.0.69 [INFO] [stderr] Adding tinyvec v1.8.0 [INFO] [stderr] Adding tinyvec_macros v0.1.1 [INFO] [stderr] Adding unicode-bidi v0.3.17 [INFO] [stderr] Adding unicode-ident v1.0.14 [INFO] [stderr] Adding unicode-normalization v0.1.24 [INFO] [stderr] Adding url v1.7.2 [INFO] [stderr] Adding vcpkg v0.2.15 [INFO] [stderr] Adding windows-targets v0.52.6 [INFO] [stderr] Adding windows_aarch64_gnullvm v0.52.6 [INFO] [stderr] Adding windows_aarch64_msvc v0.52.6 [INFO] [stderr] Adding windows_i686_gnu v0.52.6 [INFO] [stderr] Adding windows_i686_gnullvm v0.52.6 [INFO] [stderr] Adding windows_i686_msvc v0.52.6 [INFO] [stderr] Adding windows_x86_64_gnu v0.52.6 [INFO] [stderr] Adding windows_x86_64_gnullvm v0.52.6 [INFO] [stderr] Adding windows_x86_64_msvc v0.52.6 [INFO] [stderr] Adding yaml-rust v0.3.5 [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+2277c63fa464d237b17b68d3b87f9fbb89e58a3e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] Error response from daemon: mkdir /var/lib/docker/overlay2/a2fe2dd04c820e046e6d218ed94fb182d94a7afacc73a6122e8b14bcb4a5cda7-init: no space left on device [INFO] checking wheaton5/long_read_binner against try#2277c63fa464d237b17b68d3b87f9fbb89e58a3e for pr-133570-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Flong_read_binner" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] fatal: sha1 file '/workspace/builds/worker-4-tc2/source/.git/index.lock' write error. Out of diskspace [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] checking wheaton5/long_read_binner against try#2277c63fa464d237b17b68d3b87f9fbb89e58a3e for pr-133570-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Flong_read_binner" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] fatal: sha1 file '/workspace/builds/worker-4-tc2/source/.git/index.lock' write error. Out of diskspace [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] [INFO] checking wheaton5/long_read_binner against try#2277c63fa464d237b17b68d3b87f9fbb89e58a3e for pr-133570-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fwheaton5%2Flong_read_binner" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] error: unable to write file Cargo.lock [INFO] [stderr] error: unable to write file Cargo.toml [INFO] [stderr] error: unable to write file README.md [INFO] [stderr] fatal: cannot create directory at 'src': No space left on device [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] ExecutionFailed(ExitStatus(unix_wait_status(32768))) failed to checkout https://github.com/wheaton5/long_read_binner