[INFO] cloning repository https://github.com/slazicoicr/bam_histogram_qc [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/slazicoicr/bam_histogram_qc" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 73ee3528cb6a555df461966bbdb6ddb85b23fb9d [INFO] checking slazicoicr/bam_histogram_qc against master#d49be02cf6d2e2a01264fcdef1e20c826710c0f5 for pr-133570-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/slazicoicr/bam_histogram_qc on toolchain d49be02cf6d2e2a01264fcdef1e20c826710c0f5 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d49be02cf6d2e2a01264fcdef1e20c826710c0f5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/slazicoicr/bam_histogram_qc [INFO] finished tweaking git repo https://github.com/slazicoicr/bam_histogram_qc [INFO] tweaked toml for git repo https://github.com/slazicoicr/bam_histogram_qc written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d49be02cf6d2e2a01264fcdef1e20c826710c0f5" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 98 packages to latest compatible versions [INFO] [stderr] Adding clap v2.33.4 (available: v2.34.0) [INFO] [stderr] Adding rust-htslib v0.32.0 (available: v0.49.0) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d49be02cf6d2e2a01264fcdef1e20c826710c0f5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded rust-htslib v0.32.0 [INFO] [stderr] Downloaded clap v2.33.4 [INFO] [stderr] Downloaded hts-sys v1.10.3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+d49be02cf6d2e2a01264fcdef1e20c826710c0f5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 748db3fe8806d89aa5a4bafd9c538a3336f25d001dd6ce10b194865c59193dec [INFO] running `Command { std: "docker" "start" "-a" "748db3fe8806d89aa5a4bafd9c538a3336f25d001dd6ce10b194865c59193dec", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "748db3fe8806d89aa5a4bafd9c538a3336f25d001dd6ce10b194865c59193dec", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "748db3fe8806d89aa5a4bafd9c538a3336f25d001dd6ce10b194865c59193dec", kill_on_drop: false }` [INFO] [stdout] 748db3fe8806d89aa5a4bafd9c538a3336f25d001dd6ce10b194865c59193dec [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+d49be02cf6d2e2a01264fcdef1e20c826710c0f5" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 92d91e970b80876d0770773ac5aa7efcee5948e971837bdc6cf9a24fdc0a7604 [INFO] running `Command { std: "docker" "start" "-a" "92d91e970b80876d0770773ac5aa7efcee5948e971837bdc6cf9a24fdc0a7604", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.92 [INFO] [stderr] Compiling unicode-ident v1.0.14 [INFO] [stderr] Compiling libc v0.2.168 [INFO] [stderr] Compiling shlex v1.3.0 [INFO] [stderr] Compiling pkg-config v0.3.31 [INFO] [stderr] Checking stable_deref_trait v1.2.0 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Checking writeable v0.5.5 [INFO] [stderr] Checking litemap v0.7.4 [INFO] [stderr] Checking icu_locid_transform_data v1.5.0 [INFO] [stderr] Checking icu_properties_data v1.5.0 [INFO] [stderr] Checking memchr v2.7.4 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking smallvec v1.13.2 [INFO] [stderr] Checking utf16_iter v1.0.5 [INFO] [stderr] Checking icu_normalizer_data v1.5.0 [INFO] [stderr] Checking write16 v1.0.0 [INFO] [stderr] Compiling rustversion v1.0.18 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Checking utf8_iter v1.0.4 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Checking regex-syntax v0.8.5 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling quote v1.0.37 [INFO] [stderr] Compiling jobserver v0.1.32 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Compiling syn v2.0.90 [INFO] [stderr] Compiling serde v1.0.216 [INFO] [stderr] Checking percent-encoding v2.3.1 [INFO] [stderr] Compiling cc v1.2.4 [INFO] [stderr] Checking form_urlencoded v1.2.1 [INFO] [stderr] Checking lazy_static v1.5.0 [INFO] [stderr] Checking unicode-width v0.1.14 [INFO] [stderr] Compiling serde_json v1.0.133 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Checking itoa v1.0.14 [INFO] [stderr] Checking bitflags v1.3.2 [INFO] [stderr] Checking ryu v1.0.18 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking clap v2.33.4 [INFO] [stderr] Compiling openssl-src v300.4.1+3.4.0 [INFO] [stderr] Compiling openssl-sys v0.9.104 [INFO] [stderr] Compiling libz-sys v1.1.20 [INFO] [stderr] Compiling curl-sys v0.4.78+curl-8.11.0 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Checking regex-automata v0.4.9 [INFO] [stderr] Compiling hts-sys v1.10.3 [INFO] [stderr] Compiling synstructure v0.13.1 [INFO] [stderr] Compiling zerofrom-derive v0.1.5 [INFO] [stderr] Compiling yoke-derive v0.7.5 [INFO] [stderr] Compiling zerovec-derive v0.10.3 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling icu_provider_macros v1.5.0 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Checking regex v1.11.1 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Checking zerofrom v0.1.5 [INFO] [stderr] Checking yoke v0.7.5 [INFO] [stderr] Compiling serde_derive v1.0.216 [INFO] [stderr] Checking zerovec v0.10.4 [INFO] [stderr] Checking tinystr v0.7.6 [INFO] [stderr] Checking icu_collections v1.5.0 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Checking icu_locid v1.5.0 [INFO] [stderr] Checking icu_provider v1.5.0 [INFO] [stderr] Checking icu_locid_transform v1.5.0 [INFO] [stderr] Checking icu_properties v1.5.1 [INFO] [stderr] Checking icu_normalizer v1.5.0 [INFO] [stderr] Checking idna_adapter v1.2.0 [INFO] [stderr] Checking idna v1.0.3 [INFO] [stderr] Checking url v2.5.4 [INFO] [stderr] Checking rust-htslib v0.32.0 [INFO] [stderr] Checking bam_histogram_qc v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> src/main.rs:123:14 [INFO] [stdout] | [INFO] [stdout] 123 | BamError(BamError), [INFO] [stdout] | -------- ^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `Error` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 123 | BamError(()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> src/main.rs:124:15 [INFO] [stdout] | [INFO] [stdout] 124 | JSONError(serde_json::error::Error), [INFO] [stdout] | --------- ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `Error` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 124 | JSONError(()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> src/main.rs:123:14 [INFO] [stdout] | [INFO] [stdout] 123 | BamError(BamError), [INFO] [stdout] | -------- ^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `Error` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 123 | BamError(()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> src/main.rs:124:15 [INFO] [stdout] | [INFO] [stdout] 124 | JSONError(serde_json::error::Error), [INFO] [stdout] | --------- ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `Error` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 124 | JSONError(()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 4m 23s [INFO] running `Command { std: "docker" "inspect" "92d91e970b80876d0770773ac5aa7efcee5948e971837bdc6cf9a24fdc0a7604", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "92d91e970b80876d0770773ac5aa7efcee5948e971837bdc6cf9a24fdc0a7604", kill_on_drop: false }` [INFO] [stdout] 92d91e970b80876d0770773ac5aa7efcee5948e971837bdc6cf9a24fdc0a7604