[INFO] fetching crate reglyco-ensemble 0.1.1...
[INFO] checking reglyco-ensemble-0.1.1 against 3154cc1a3e6424e44f438a95007d043ed5ceaaf6 for pr-133502-30
[INFO] extracting crate reglyco-ensemble 0.1.1 into /workspace/builds/worker-3-tc2/source
[INFO] started tweaking crates.io crate reglyco-ensemble 0.1.1
[INFO] finished tweaking crates.io crate reglyco-ensemble 0.1.1
[INFO] tweaked toml for crates.io crate reglyco-ensemble 0.1.1 written to /workspace/builds/worker-3-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate reglyco-ensemble 0.1.1 on toolchain 3154cc1a3e6424e44f438a95007d043ed5ceaaf6
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3154cc1a3e6424e44f438a95007d043ed5ceaaf6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate reglyco-ensemble 0.1.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3154cc1a3e6424e44f438a95007d043ed5ceaaf6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:77db811e55d90add9212f6832c23229e3de5f1c1f9905e8cb07319ea15df73ac" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] ccb19348a0ed190759361afe4ea5377e4eb707cae5d4069d776fa009a127fdfe
[INFO] running `Command { std: "docker" "start" "ccb19348a0ed190759361afe4ea5377e4eb707cae5d4069d776fa009a127fdfe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ccb19348a0ed190759361afe4ea5377e4eb707cae5d4069d776fa009a127fdfe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "ccb19348a0ed190759361afe4ea5377e4eb707cae5d4069d776fa009a127fdfe" "/opt/rustwide/cargo-home/bin/cargo" "+3154cc1a3e6424e44f438a95007d043ed5ceaaf6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ccb19348a0ed190759361afe4ea5377e4eb707cae5d4069d776fa009a127fdfe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "ccb19348a0ed190759361afe4ea5377e4eb707cae5d4069d776fa009a127fdfe" "/opt/rustwide/cargo-home/bin/cargo" "+3154cc1a3e6424e44f438a95007d043ed5ceaaf6" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.189
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[INFO] [stderr]     Checking glysys-opt v0.1.1
[INFO] [stderr]     Checking crabwurcs-core v0.3.1
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[INFO] [stderr]     Checking crabwurcs-mol v0.3.1
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[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking url v2.5.8
[INFO] [stderr]     Checking crabwurcs-pdb v0.3.1
[INFO] [stderr]     Checking crabwurcs-snfg v0.3.1
[INFO] [stderr]     Checking crabwurcs v0.3.1
[INFO] [stderr]     Checking tower-http v0.6.11
[INFO] [stderr]     Checking glysys v0.1.1
[INFO] [stderr]     Checking reqwest v0.12.28
[INFO] [stderr]     Checking reglyco-core v0.1.1
[INFO] [stderr]     Checking glysys-energy v0.1.1
[INFO] [stderr]     Checking reglyco-build v0.1.0
[INFO] [stderr]     Checking reglyco-relax v0.1.0
[INFO] [stderr]     Checking reglyco-ensemble v0.1.1 (/opt/rustwide/workdir)
[INFO] [stdout] error: couldn't read `src/../../../tests/fixtures/protein.pdb`: No such file or directory (os error 2)
[INFO] [stdout]    --> src/sasa.rs:549:13
[INFO] [stdout]     |
[INFO] [stdout] 549 |             include_str!("../../../tests/fixtures/protein.pdb"),
[INFO] [stdout]     |             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: couldn't read `src/../../../tests/fixtures/glycan.pdb`: No such file or directory (os error 2)
[INFO] [stdout]     --> src/statistical.rs:1202:31
[INFO] [stdout]      |
[INFO] [stdout] 1202 |         std::fs::write(&path, include_str!("../../../tests/fixtures/glycan.pdb")).unwrap();
[INFO] [stdout]      |                               ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: couldn't read `src/../../../tests/fixtures/protein.pdb`: No such file or directory (os error 2)
[INFO] [stdout]     --> src/statistical.rs:1211:13
[INFO] [stdout]      |
[INFO] [stdout] 1211 |             include_str!("../../../tests/fixtures/protein.pdb"),
[INFO] [stdout]      |             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: couldn't read `src/../../../tests/fixtures/glycan.pdb`: No such file or directory (os error 2)
[INFO] [stdout]     --> src/lib.rs:7521:26
[INFO] [stdout]      |
[INFO] [stdout] 7521 |     const GLYCAN: &str = include_str!("../../../tests/fixtures/glycan.pdb");
[INFO] [stdout]      |                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: couldn't read `src/../../../tests/fixtures/protein.pdb`: No such file or directory (os error 2)
[INFO] [stdout]     --> src/lib.rs:7522:27
[INFO] [stdout]      |
[INFO] [stdout] 7522 |     const PROTEIN: &str = include_str!("../../../tests/fixtures/protein.pdb");
[INFO] [stdout]      |                           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `reglyco-ensemble` (lib test) due to 5 previous errors
[INFO] running `Command { std: "docker" "inspect" "ccb19348a0ed190759361afe4ea5377e4eb707cae5d4069d776fa009a127fdfe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ccb19348a0ed190759361afe4ea5377e4eb707cae5d4069d776fa009a127fdfe", kill_on_drop: false }`
[INFO] [stdout] ccb19348a0ed190759361afe4ea5377e4eb707cae5d4069d776fa009a127fdfe
