[INFO] fetching crate fastqrab-steps 0.9.1...
[INFO] checking fastqrab-steps-0.9.1 against dfbea5bc945a9d7ff017d3d4bfbd1af9295fe5b8 for pr-133502-27
[INFO] extracting crate fastqrab-steps 0.9.1 into /workspace/builds/worker-4-tc1/source
[INFO] started tweaking crates.io crate fastqrab-steps 0.9.1
[INFO] finished tweaking crates.io crate fastqrab-steps 0.9.1
[INFO] tweaked toml for crates.io crate fastqrab-steps 0.9.1 written to /workspace/builds/worker-4-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate fastqrab-steps 0.9.1 on toolchain dfbea5bc945a9d7ff017d3d4bfbd1af9295fe5b8
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dfbea5bc945a9d7ff017d3d4bfbd1af9295fe5b8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate fastqrab-steps 0.9.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dfbea5bc945a9d7ff017d3d4bfbd1af9295fe5b8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded union-find-rs v0.2.1
[INFO] [stderr]   Downloaded typed_floats_macros v1.0.7
[INFO] [stderr]   Downloaded const_fn v0.4.12
[INFO] [stderr]   Downloaded typed_floats v1.0.7
[INFO] [stderr]   Downloaded noodles-core v0.19.0
[INFO] [stderr]   Downloaded codesnake v0.2.1
[INFO] [stderr]   Downloaded mutants v0.0.3
[INFO] [stderr]   Downloaded scalable_cuckoo_filter v0.5.1
[INFO] [stderr]   Downloaded toml-pretty-deser-macros v0.3.3
[INFO] [stderr]   Downloaded hamming-resonate v0.4.0
[INFO] [stderr]   Downloaded toml-pretty-deser v0.3.6
[INFO] [stderr]   Downloaded toml_writer v1.1.0+spec-1.1.0
[INFO] [stderr]   Downloaded which v7.0.3
[INFO] [stderr]   Downloaded noodles v0.108.0
[INFO] [stderr]   Downloaded bgzip v0.3.1
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded noodles-csi v0.55.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.46.0
[INFO] [stderr]   Downloaded derefable v0.1.0
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded fastqrab-dna v0.9.1
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded ordered-float v5.2.0
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded ex v0.1.3
[INFO] [stderr]   Downloaded liblzma v0.3.6
[INFO] [stderr]   Downloaded toml_edit v0.24.1+spec-1.1.0
[INFO] [stderr]   Downloaded niffler v3.0.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded fastqrab-config v0.9.1
[INFO] [stderr]   Downloaded fastqrab-io v0.9.1
[INFO] [stderr]   Downloaded disjoint v0.8.0
[INFO] [stderr]   Downloaded noodles-bam v0.87.0
[INFO] [stderr]   Downloaded portable-atomic-util v0.2.6
[INFO] [stderr]   Downloaded noodles-sam v0.83.0
[INFO] [stderr]   Downloaded bio v3.0.0
[INFO] [stderr]   Downloaded fasteval v0.2.4
[INFO] [stderr]   Downloaded nalgebra v0.33.2
[INFO] [stderr]   Downloaded libz-sys v1.1.25
[INFO] [stderr]   Downloaded liblzma-sys v0.3.13
[INFO] [stderr]   Downloaded gzp v2.0.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:c36f533e8924a726b63f9d01e781fa8c8c28c96d1d595403829afb31452ee0f5" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 53db584e4ed84a6424f41a1bbfb468a37181ee1892996ca4d6900b1764ee25cf
[INFO] running `Command { std: "docker" "start" "53db584e4ed84a6424f41a1bbfb468a37181ee1892996ca4d6900b1764ee25cf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "53db584e4ed84a6424f41a1bbfb468a37181ee1892996ca4d6900b1764ee25cf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "53db584e4ed84a6424f41a1bbfb468a37181ee1892996ca4d6900b1764ee25cf" "/opt/rustwide/cargo-home/bin/cargo" "+dfbea5bc945a9d7ff017d3d4bfbd1af9295fe5b8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "53db584e4ed84a6424f41a1bbfb468a37181ee1892996ca4d6900b1764ee25cf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "53db584e4ed84a6424f41a1bbfb468a37181ee1892996ca4d6900b1764ee25cf" "/opt/rustwide/cargo-home/bin/cargo" "+dfbea5bc945a9d7ff017d3d4bfbd1af9295fe5b8" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling zerocopy v0.8.47
[INFO] [stderr]     Checking simd-adler32 v0.3.9
[INFO] [stderr]     Checking regex-automata v0.4.14
[INFO] [stderr]     Checking getrandom v0.2.17
[INFO] [stderr]     Checking zlib-rs v0.6.3
[INFO] [stderr]     Checking either v1.15.0
[INFO] [stderr]    Compiling cc v1.2.58
[INFO] [stderr]     Checking num-traits v0.2.19
[INFO] [stderr]     Checking indexmap v2.13.0
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]     Checking bytemuck v1.25.0
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking rayon v1.11.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking winnow v1.0.0
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling quote v0.6.13
[INFO] [stderr]    Compiling serde_json v1.0.149
[INFO] [stderr]     Checking csv-core v0.1.13
[INFO] [stderr]     Checking toml_writer v1.1.0+spec-1.1.0
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]     Checking bit-vec v0.9.1
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]     Checking toml_parser v1.1.0+spec-1.1.0
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking toml_datetime v0.7.5+spec-1.1.0
[INFO] [stderr]    Compiling const_fn v0.4.12
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking ordered-float v5.2.0
[INFO] [stderr]     Checking bit-set v0.8.0
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]     Checking petgraph v0.8.3
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking csv v1.4.0
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]     Checking toml_edit v0.24.1+spec-1.1.0
[INFO] [stderr]     Checking num_cpus v1.17.0
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]    Compiling mutants v0.0.4
[INFO] [stderr]     Checking ndarray v0.16.1
[INFO] [stderr]     Checking codesnake v0.2.1
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking strum v0.26.3
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking rustix v1.1.4
[INFO] [stderr]     Checking crypto-common v0.1.7
[INFO] [stderr]     Checking nanorand v0.7.0
[INFO] [stderr]    Compiling libz-sys v1.1.25
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
[INFO] [stderr]     Checking simba v0.9.1
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling liblzma-sys v0.3.13
[INFO] [stderr]     Checking smallvec v1.15.1
[INFO] [stderr]     Checking futures-core v0.3.32
[INFO] [stderr]     Checking futures-sink v0.3.32
[INFO] [stderr]     Checking flate2 v1.1.9
[INFO] [stderr]     Checking bzip2 v0.5.2
[INFO] [stderr]     Checking flume v0.11.1
[INFO] [stderr]     Checking liblzma v0.3.6
[INFO] [stderr]     Checking noodles-bgzf v0.46.0
[INFO] [stderr]     Checking bstr v1.12.1
[INFO] [stderr]     Checking regex v1.12.3
[INFO] [stderr]     Checking digest v0.10.7
[INFO] [stderr]     Checking core_affinity v0.8.3
[INFO] [stderr]    Compiling mutants v0.0.3
[INFO] [stderr]     Checking once_cell v1.21.4
[INFO] [stderr]     Checking env_home v0.1.0
[INFO] [stderr]     Checking quick-error v1.2.3
[INFO] [stderr]     Checking ex v0.1.3
[INFO] [stderr]     Checking sha2 v0.10.9
[INFO] [stderr]     Checking siphasher v1.0.2
[INFO] [stderr]     Checking disjoint v0.8.0
[INFO] [stderr]     Checking union-find-rs v0.2.1
[INFO] [stderr]     Checking fasteval v0.2.4
[INFO] [stderr]     Checking noodles-core v0.19.0
[INFO] [stderr]    Compiling derefable v0.1.0
[INFO] [stderr]     Checking noodles-csi v0.55.0
[INFO] [stderr]     Checking which v7.0.3
[INFO] [stderr]     Checking tempfile v3.27.0
[INFO] [stderr]     Checking noodles-sam v0.83.0
[INFO] [stderr]    Compiling proc-macro-error2 v2.0.1
[INFO] [stderr]    Compiling serde_derive_internals v0.29.1
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling ref-cast-impl v1.0.25
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling getset v0.1.6
[INFO] [stderr]    Compiling toml-pretty-deser-macros v0.3.3
[INFO] [stderr]    Compiling typed_floats_macros v1.0.7
[INFO] [stderr]     Checking ref-cast v1.0.25
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]     Checking ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling enum_dispatch v0.3.13
[INFO] [stderr]    Compiling schemars_derive v1.2.1
[INFO] [stderr]     Checking noodles-bam v0.87.0
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking rand_chacha v0.9.0
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking bgzip v0.3.1
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking thiserror v2.0.18
[INFO] [stderr]     Checking rand v0.9.4
[INFO] [stderr]     Checking hamming-resonate v0.4.0
[INFO] [stderr]     Checking gzp v2.0.2
[INFO] [stderr]     Checking toml-pretty-deser v0.3.6
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking noodles v0.108.0
[INFO] [stderr]     Checking scalable_cuckoo_filter v0.5.1
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking typed_floats v1.0.7
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]     Checking zstd v0.13.3
[INFO] [stderr]     Checking niffler v3.0.0
[INFO] [stderr]     Checking nalgebra v0.33.2
[INFO] [stderr]     Checking serde v1.0.228
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking multimap v0.10.1
[INFO] [stderr]     Checking schemars v1.2.1
[INFO] [stderr]     Checking statrs v0.18.0
[INFO] [stderr]     Checking bio v3.0.0
[INFO] [stderr]     Checking fastqrab-dna v0.9.1
[INFO] [stderr]     Checking fastqrab-config v0.9.1
[INFO] [stderr]     Checking fastqrab-io v0.9.1
[INFO] [stderr]     Checking fastqrab-steps v0.9.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 14s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: proc-macro-error2 v2.0.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 5`
[INFO] running `Command { std: "docker" "inspect" "53db584e4ed84a6424f41a1bbfb468a37181ee1892996ca4d6900b1764ee25cf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "53db584e4ed84a6424f41a1bbfb468a37181ee1892996ca4d6900b1764ee25cf", kill_on_drop: false }`
[INFO] [stdout] 53db584e4ed84a6424f41a1bbfb468a37181ee1892996ca4d6900b1764ee25cf
