[INFO] cloning repository https://github.com/OscarAspelin95/ani_rs [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/OscarAspelin95/ani_rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FOscarAspelin95%2Fani_rs", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FOscarAspelin95%2Fani_rs'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 7f449094a4df51e3fdcf336e9dac9c24a3f92746 [INFO] checking OscarAspelin95/ani_rs against master#c290daa1e5274a52e54a0f49e31bd70192abc606 for pr-133502-23 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FOscarAspelin95%2Fani_rs" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'... [INFO] [stderr] done. [INFO] removed /workspace/builds/worker-2-tc1/source/.cargo/config.toml [INFO] started tweaking git repo https://github.com/OscarAspelin95/ani_rs [INFO] finished tweaking git repo https://github.com/OscarAspelin95/ani_rs [INFO] tweaked toml for git repo https://github.com/OscarAspelin95/ani_rs written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/OscarAspelin95/ani_rs on toolchain c290daa1e5274a52e54a0f49e31bd70192abc606 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c290daa1e5274a52e54a0f49e31bd70192abc606" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/OscarAspelin95/ani_rs already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c290daa1e5274a52e54a0f49e31bd70192abc606" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded simple_logger v5.2.0 [INFO] [stderr] Downloaded unit-prefix v0.5.2 [INFO] [stderr] Downloaded seq-hash v0.1.2 [INFO] [stderr] Downloaded rstest_macros v0.26.1 [INFO] [stderr] Downloaded rstest v0.26.1 [INFO] [stderr] Downloaded ensure_simd v0.1.0 [INFO] [stderr] Downloaded mem_dbg-derive v0.2.1 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded derefable v0.1.0 [INFO] [stderr] Downloaded bio_utils_rs v0.0.2 [INFO] [stderr] Downloaded simd-minimizers v2.3.1 [INFO] [stderr] Downloaded console v0.16.4 [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded multimap v0.10.1 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded getset v0.1.6 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded chacha20 v0.10.0 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded mem_dbg v0.3.4 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded csv-core v0.1.13 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded packed-seq v4.4.2 [INFO] [stderr] Downloaded ordered-float v5.3.0 [INFO] [stderr] Downloaded safe_arch v0.7.4 [INFO] [stderr] Downloaded indicatif v0.18.6 [INFO] [stderr] Downloaded rand_distr v0.4.3 [INFO] [stderr] Downloaded portable-atomic-util v0.2.7 [INFO] [stderr] Downloaded simba v0.9.1 [INFO] [stderr] Downloaded matrixmultiply v0.3.10 [INFO] [stderr] Downloaded wide v0.7.33 [INFO] [stderr] Downloaded winnow v1.0.1 [INFO] [stderr] Downloaded rayon v1.12.0 [INFO] [stderr] Downloaded statrs v0.18.0 [INFO] [stderr] Downloaded bio v3.0.0 [INFO] [stderr] Downloaded bio v2.3.0 [INFO] [stderr] Downloaded ndarray v0.16.1 [INFO] [stderr] Downloaded nalgebra v0.33.3 [INFO] [stderr] Downloaded libc v0.2.185 [INFO] [stderr] Downloaded csv v1.4.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }` [INFO] [stdout] a1afe900c667dc566112a29388ac7b8b961d9904522bbd0790a5c18c2683ad24 [INFO] running `Command { std: "docker" "start" "a1afe900c667dc566112a29388ac7b8b961d9904522bbd0790a5c18c2683ad24", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a1afe900c667dc566112a29388ac7b8b961d9904522bbd0790a5c18c2683ad24", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "a1afe900c667dc566112a29388ac7b8b961d9904522bbd0790a5c18c2683ad24" "/opt/rustwide/cargo-home/bin/cargo" "+c290daa1e5274a52e54a0f49e31bd70192abc606" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a1afe900c667dc566112a29388ac7b8b961d9904522bbd0790a5c18c2683ad24", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "a1afe900c667dc566112a29388ac7b8b961d9904522bbd0790a5c18c2683ad24" "/opt/rustwide/cargo-home/bin/cargo" "+c290daa1e5274a52e54a0f49e31bd70192abc606" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.185 [INFO] [stderr] Compiling autocfg v1.5.0 [INFO] [stderr] Checking bytemuck v1.25.0 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Checking memchr v2.8.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling rustversion v1.0.22 [INFO] [stderr] Checking utf8parse v0.2.2 [INFO] [stderr] Compiling syn v2.0.117 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Checking regex-syntax v0.8.10 [INFO] [stderr] Checking either v1.15.0 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking itoa v1.0.18 [INFO] [stderr] Checking anstyle-parse v1.0.0 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking safe_arch v0.7.4 [INFO] [stderr] Compiling hashbrown v0.17.0 [INFO] [stderr] Compiling semver v1.0.28 [INFO] [stderr] Checking colorchoice v1.0.5 [INFO] [stderr] Checking typenum v1.20.0 [INFO] [stderr] Compiling equivalent v1.0.2 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Checking wide v0.7.33 [INFO] [stderr] Compiling anyhow v1.0.102 [INFO] [stderr] Compiling winnow v1.0.1 [INFO] [stderr] Checking anstyle v1.0.14 [INFO] [stderr] Checking aho-corasick v1.1.4 [INFO] [stderr] Checking is_terminal_polyfill v1.70.2 [INFO] [stderr] Checking anstyle-query v1.1.5 [INFO] [stderr] Checking foldhash v0.1.5 [INFO] [stderr] Checking bitflags v2.11.1 [INFO] [stderr] Checking anstream v1.0.0 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Checking indexmap v2.14.0 [INFO] [stderr] Checking csv-core v0.1.13 [INFO] [stderr] Checking hashbrown v0.15.5 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling rustc_version v0.4.1 [INFO] [stderr] Checking itertools v0.14.0 [INFO] [stderr] Compiling proc-macro-error-attr2 v2.0.0 [INFO] [stderr] Compiling toml_datetime v1.1.1+spec-1.1.0 [INFO] [stderr] Compiling toml_parser v1.1.2+spec-1.1.0 [INFO] [stderr] Checking ryu v1.0.23 [INFO] [stderr] Checking clap_lex v1.1.0 [INFO] [stderr] Compiling parking_lot_core v0.9.12 [INFO] [stderr] Checking ensure_simd v0.1.0 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Compiling rayon-core v1.13.0 [INFO] [stderr] Checking bit-vec v0.8.0 [INFO] [stderr] Checking getrandom v0.2.17 [INFO] [stderr] Checking getrandom v0.3.4 [INFO] [stderr] Checking num-rational v0.4.2 [INFO] [stderr] Checking fixedbitset v0.5.7 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking rand_core v0.9.5 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking petgraph v0.8.3 [INFO] [stderr] Checking bit-set v0.8.0 [INFO] [stderr] Checking ndarray v0.16.1 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking rand_chacha v0.9.0 [INFO] [stderr] Checking clap_builder v4.6.0 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking simba v0.9.1 [INFO] [stderr] Compiling toml_edit v0.25.11+spec-1.1.0 [INFO] [stderr] Checking ordered-float v5.3.0 [INFO] [stderr] Checking regex-automata v0.4.14 [INFO] [stderr] Compiling rstest_macros v0.26.1 [INFO] [stderr] Checking rand v0.9.4 [INFO] [stderr] Checking rand v0.8.6 [INFO] [stderr] Checking crossbeam-deque v0.8.6 [INFO] [stderr] Compiling portable-atomic v1.13.1 [INFO] [stderr] Compiling getrandom v0.4.2 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking smallvec v1.15.1 [INFO] [stderr] Checking bytecount v0.6.9 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking rand_core v0.10.1 [INFO] [stderr] Compiling num-conv v0.2.1 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Checking strum v0.26.3 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Compiling time-core v0.1.8 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Compiling proc-macro-crate v3.5.0 [INFO] [stderr] Checking lock_api v0.4.14 [INFO] [stderr] Compiling time-macros v0.2.27 [INFO] [stderr] Checking csv v1.4.0 [INFO] [stderr] Checking deranged v0.5.8 [INFO] [stderr] Checking regex v1.12.3 [INFO] [stderr] Checking unicode-width v0.2.2 [INFO] [stderr] Checking futures-task v0.3.32 [INFO] [stderr] Checking futures-core v0.3.32 [INFO] [stderr] Checking simd-adler32 v0.3.9 [INFO] [stderr] Checking pin-project-lite v0.2.17 [INFO] [stderr] Checking adler2 v2.0.1 [INFO] [stderr] Checking slab v0.4.12 [INFO] [stderr] Compiling relative-path v1.9.3 [INFO] [stderr] Checking num_threads v0.1.7 [INFO] [stderr] Checking cpufeatures v0.3.0 [INFO] [stderr] Checking once_cell v1.21.4 [INFO] [stderr] Compiling cfg-if v1.0.4 [INFO] [stderr] Compiling glob v0.3.3 [INFO] [stderr] Checking rayon v1.12.0 [INFO] [stderr] Checking miniz_oxide v0.8.9 [INFO] [stderr] Checking chacha20 v0.10.0 [INFO] [stderr] Checking dashmap v6.2.1 [INFO] [stderr] Checking console v0.16.4 [INFO] [stderr] Checking rustc-hash v2.1.3 [INFO] [stderr] Checking log v0.4.33 [INFO] [stderr] Checking unit-prefix v0.5.2 [INFO] [stderr] Checking colored v3.1.1 [INFO] [stderr] Checking futures-timer v3.0.3 [INFO] [stderr] Checking rand v0.10.2 [INFO] [stderr] Checking flate2 v1.1.9 [INFO] [stderr] Compiling derefable v0.1.0 [INFO] [stderr] Checking indicatif v0.18.6 [INFO] [stderr] Checking time v0.3.47 [INFO] [stderr] Compiling proc-macro-error2 v2.0.1 [INFO] [stderr] Checking simple_logger v5.2.0 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling mem_dbg-derive v0.2.1 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling clap_derive v4.6.1 [INFO] [stderr] Compiling futures-macro v0.3.32 [INFO] [stderr] Compiling getset v0.1.6 [INFO] [stderr] Checking mem_dbg v0.3.4 [INFO] [stderr] Checking enum-map v2.7.3 [INFO] [stderr] Checking packed-seq v4.4.2 [INFO] [stderr] Checking thiserror v2.0.18 [INFO] [stderr] Checking futures-util v0.3.32 [INFO] [stderr] Checking seq-hash v0.1.2 [INFO] [stderr] Checking clap v4.6.1 [INFO] [stderr] Checking simd-minimizers v2.3.1 [INFO] [stderr] Checking nalgebra v0.33.3 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking multimap v0.10.1 [INFO] [stderr] Checking rstest v0.26.1 [INFO] [stderr] Checking statrs v0.18.0 [INFO] [stderr] Checking bio v3.0.0 [INFO] [stderr] Checking bio v2.3.0 [INFO] [stderr] Checking bio_utils_rs v0.0.2 [INFO] [stderr] Checking ani_rs v0.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 07s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: proc-macro-error2 v2.0.1 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2` [INFO] running `Command { std: "docker" "inspect" "a1afe900c667dc566112a29388ac7b8b961d9904522bbd0790a5c18c2683ad24", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a1afe900c667dc566112a29388ac7b8b961d9904522bbd0790a5c18c2683ad24", kill_on_drop: false }` [INFO] [stdout] a1afe900c667dc566112a29388ac7b8b961d9904522bbd0790a5c18c2683ad24