[INFO] cloning repository https://github.com/predomics/gpredomics [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/predomics/gpredomics" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpredomics%2Fgpredomics", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpredomics%2Fgpredomics'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 56ad043a58395f7dff3d1494ac0b47d2709a25c8 [INFO] checking predomics/gpredomics against master#42b384ec0dfcd528d99a4db0a337d9188a9eecaa for pr-133502-16 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpredomics%2Fgpredomics" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/predomics/gpredomics [INFO] finished tweaking git repo https://github.com/predomics/gpredomics [INFO] tweaked toml for git repo https://github.com/predomics/gpredomics written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/predomics/gpredomics on toolchain 42b384ec0dfcd528d99a4db0a337d9188a9eecaa [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+42b384ec0dfcd528d99a4db0a337d9188a9eecaa" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/predomics/gpredomics already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+42b384ec0dfcd528d99a4db0a337d9188a9eecaa" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded rmp v0.8.14 [INFO] [stderr] Downloaded nu-ansi-term v0.49.0 [INFO] [stderr] Downloaded fishers_exact v1.0.1 [INFO] [stderr] Downloaded rmp-serde v1.3.0 [INFO] [stderr] Downloaded argmin-math v0.4.0 [INFO] [stderr] Downloaded wide v0.7.30 [INFO] [stderr] Downloaded fast-float v0.2.0 [INFO] [stderr] Downloaded statrs v0.18.0 [INFO] [stderr] Downloaded argmin v0.10.0 [INFO] [stderr] Downloaded flexi_logger v0.27.4 [INFO] [stderr] Downloaded syn v2.0.92 [INFO] [stderr] Downloaded nalgebra v0.33.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+42b384ec0dfcd528d99a4db0a337d9188a9eecaa" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 825ffbcde1f1f5d1122faa58f4ce95306da94f9b4cab7f8222d43a0f51c7fec5 [INFO] running `Command { std: "docker" "start" "-a" "825ffbcde1f1f5d1122faa58f4ce95306da94f9b4cab7f8222d43a0f51c7fec5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "825ffbcde1f1f5d1122faa58f4ce95306da94f9b4cab7f8222d43a0f51c7fec5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "825ffbcde1f1f5d1122faa58f4ce95306da94f9b4cab7f8222d43a0f51c7fec5", kill_on_drop: false }` [INFO] [stdout] 825ffbcde1f1f5d1122faa58f4ce95306da94f9b4cab7f8222d43a0f51c7fec5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+42b384ec0dfcd528d99a4db0a337d9188a9eecaa" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ffe8d2bf3928de68f2cc4e635f1d1f7f4fec6367fa8c03ee934a5758da6ffb03 [INFO] running `Command { std: "docker" "start" "-a" "ffe8d2bf3928de68f2cc4e635f1d1f7f4fec6367fa8c03ee934a5758da6ffb03", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.92 [INFO] [stderr] Compiling unicode-ident v1.0.14 [INFO] [stderr] Compiling libc v0.2.169 [INFO] [stderr] Compiling serde v1.0.216 [INFO] [stderr] Checking foldhash v0.1.4 [INFO] [stderr] Checking memchr v2.7.4 [INFO] [stderr] Checking log v0.4.22 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Compiling naga v24.0.0 [INFO] [stderr] Checking unicode-width v0.1.14 [INFO] [stderr] Checking hashbrown v0.15.2 [INFO] [stderr] Compiling ash v0.38.0+1.3.281 [INFO] [stderr] Checking bit-vec v0.8.0 [INFO] [stderr] Checking smallvec v1.13.2 [INFO] [stderr] Compiling khronos-egl v6.0.0 [INFO] [stderr] Compiling wgpu-hal v24.0.0 [INFO] [stderr] Checking hexf-parse v0.2.1 [INFO] [stderr] Checking bit-set v0.8.0 [INFO] [stderr] Checking codespan-reporting v0.11.1 [INFO] [stderr] Compiling anyhow v1.0.98 [INFO] [stderr] Checking anstyle-parse v0.2.7 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Checking ordered-float v4.6.0 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Compiling wgpu-core v24.0.0 [INFO] [stderr] Compiling quote v1.0.38 [INFO] [stderr] Checking indexmap v2.7.0 [INFO] [stderr] Compiling syn v2.0.92 [INFO] [stderr] Checking anstyle v1.0.11 [INFO] [stderr] Checking profiling v1.0.16 [INFO] [stderr] Checking getrandom v0.2.15 [INFO] [stderr] Checking parking_lot_core v0.9.10 [INFO] [stderr] Checking renderdoc-sys v1.1.0 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking parking_lot v0.12.3 [INFO] [stderr] Checking once_cell v1.20.2 [INFO] [stderr] Compiling litrs v0.4.1 [INFO] [stderr] Checking anstyle-query v1.1.3 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[INFO] [stderr] Checking fishers_exact v1.0.1 [INFO] [stderr] Checking fast-float v0.2.0 [INFO] [stderr] Checking pollster v0.4.0 [INFO] [stderr] Checking regex v1.11.1 [INFO] [stderr] Compiling serde_derive v1.0.216 [INFO] [stderr] Compiling zerocopy-derive v0.7.35 [INFO] [stderr] Compiling bytemuck_derive v1.8.1 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling thiserror-impl v2.0.11 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling clap_derive v4.5.41 [INFO] [stderr] Checking zerocopy v0.7.35 [INFO] [stderr] Checking thiserror v1.0.69 [INFO] [stderr] Checking flexi_logger v0.27.4 [INFO] [stderr] Checking bytemuck v1.21.0 [INFO] [stderr] Checking ppv-lite86 v0.2.20 [INFO] [stderr] Checking thiserror v2.0.11 [INFO] [stderr] Checking safe_arch v0.7.4 [INFO] [stderr] Checking strum v0.26.3 [INFO] [stderr] Checking wide v0.7.30 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking clap v4.5.41 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking argmin-math v0.4.0 [INFO] [stderr] Checking argmin v0.10.0 [INFO] [stderr] Checking simba v0.9.0 [INFO] [stderr] Checking bitflags v2.8.0 [INFO] [stderr] Checking csv v1.3.1 [INFO] [stderr] Checking rmp-serde v1.3.0 [INFO] [stderr] Checking bincode v1.3.3 [INFO] [stderr] Checking serde_yaml v0.9.34+deprecated [INFO] [stderr] Checking toml v0.5.11 [INFO] [stderr] Checking spirv v0.3.0+sdk-1.3.268.0 [INFO] [stderr] Checking gpu-descriptor-types v0.2.0 [INFO] [stderr] Checking gpu-alloc-types v0.3.0 [INFO] [stderr] Checking wgpu-types v24.0.0 [INFO] [stderr] Checking gpu-descriptor v0.3.1 [INFO] [stderr] Checking gpu-alloc v0.6.0 [INFO] [stderr] Checking nalgebra v0.33.2 [INFO] [stderr] Checking statrs v0.18.0 [INFO] [stderr] Checking gpredomics v0.7.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused imports: `deserialize_tuple_usize` and `serialize_tuple_usize` [INFO] [stdout] --> src/utils.rs:1536:56 [INFO] [stdout] | [INFO] [stdout] 1536 | use crate::utils::serde_json_hashmap_numeric::{serialize_tuple_usize, deserialize_tuple_usize}; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `instance`, `adapter`, `pipeline_layout`, `shader_module`, and `max_sm_size` are never read [INFO] [stdout] --> src/gpu.rs:218:5 [INFO] [stdout] | [INFO] [stdout] 215 | pub struct GpuAssay { [INFO] [stdout] | -------- fields in this struct [INFO] [stdout] ... [INFO] [stdout] 218 | instance: wgpu::Instance, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] 219 | adapter: wgpu::Adapter, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 226 | pipeline_layout: wgpu::PipelineLayout, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 239 | shader_module: wgpu::ShaderModule, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 243 | max_sm_size: usize, [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `GpuAssay` has a derived impl for the trait `Clone`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `data` [INFO] [stdout] --> src/population.rs:1776:14 [INFO] [stdout] | [INFO] [stdout] 1776 | let (data, cv) = create_small_cv_data(); [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_data` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `data` [INFO] [stdout] --> src/population.rs:1829:14 [INFO] [stdout] | [INFO] [stdout] 1829 | let (data, cv) = create_small_cv_data(); [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_data` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `auc` [INFO] [stdout] --> src/experiment.rs:2966:14 [INFO] [stdout] | [INFO] [stdout] 2966 | let (auc, accuracy, sensitivity, specificity, rejection_rate) = [INFO] [stdout] | ^^^ [INFO] [stdout] | [INFO] [stdout] help: if this is intentional, prefix it with an underscore [INFO] [stdout] | [INFO] [stdout] 2966 | let (_auc, accuracy, sensitivity, specificity, rejection_rate) = [INFO] [stdout] | + [INFO] [stdout] help: you might have meant to pattern match on the similarly named constant `EPSILON` [INFO] [stdout] | [INFO] [stdout] 2966 - let (auc, accuracy, sensitivity, specificity, rejection_rate) = [INFO] [stdout] 2966 + let (ga::tests::test_fit_fn_overfit_penalty::EPSILON, accuracy, sensitivity, specificity, rejection_rate) = [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `specificity` [INFO] [stdout] --> src/experiment.rs:2966:42 [INFO] [stdout] | [INFO] [stdout] 2966 | let (auc, accuracy, sensitivity, specificity, rejection_rate) = [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] help: if this is intentional, prefix it with an underscore [INFO] [stdout] | [INFO] [stdout] 2966 | let (auc, accuracy, sensitivity, _specificity, rejection_rate) = [INFO] [stdout] | + [INFO] [stdout] help: you might have meant to pattern match on the similarly named constant `EPSILON` [INFO] [stdout] | [INFO] [stdout] 2966 - let (auc, accuracy, sensitivity, specificity, rejection_rate) = [INFO] [stdout] 2966 + let (auc, accuracy, sensitivity, ga::tests::test_fit_fn_overfit_penalty::EPSILON, rejection_rate) = [INFO] [stdout] | [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `scores` [INFO] [stdout] --> src/experiment.rs:3249:32 [INFO] [stdout] | [INFO] [stdout] 3249 | let (pred_classes, scores) = jury.predict(&data); [INFO] [stdout] | ^^^^^^ help: if this is intentional, prefix it with an underscore: `_scores` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `instance`, `adapter`, `pipeline_layout`, `shader_module`, and `max_sm_size` are never read [INFO] [stdout] --> src/gpu.rs:218:5 [INFO] [stdout] | [INFO] [stdout] 215 | pub struct GpuAssay { [INFO] [stdout] | -------- fields in this struct [INFO] [stdout] ... [INFO] [stdout] 218 | instance: wgpu::Instance, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] 219 | adapter: wgpu::Adapter, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 226 | pipeline_layout: wgpu::PipelineLayout, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 239 | shader_module: wgpu::ShaderModule, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 243 | max_sm_size: usize, [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `GpuAssay` has a derived impl for the trait `Clone`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 47s [INFO] running `Command { std: "docker" "inspect" "ffe8d2bf3928de68f2cc4e635f1d1f7f4fec6367fa8c03ee934a5758da6ffb03", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ffe8d2bf3928de68f2cc4e635f1d1f7f4fec6367fa8c03ee934a5758da6ffb03", kill_on_drop: false }` [INFO] [stdout] ffe8d2bf3928de68f2cc4e635f1d1f7f4fec6367fa8c03ee934a5758da6ffb03