[INFO] fetching crate mm2 0.7.0...
[INFO] checking mm2-0.7.0 against master#717f5df2c308dfb4b7b8e6c002c11fe8269c4011 for pr-133274
[INFO] extracting crate mm2 0.7.0 into /workspace/builds/worker-5-tc1/source
[INFO] validating manifest of crates.io crate mm2 0.7.0 on toolchain 717f5df2c308dfb4b7b8e6c002c11fe8269c4011
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+717f5df2c308dfb4b7b8e6c002c11fe8269c4011" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate mm2 0.7.0
[INFO] finished tweaking crates.io crate mm2 0.7.0
[INFO] tweaked toml for crates.io crate mm2 0.7.0 written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] crate crates.io crate mm2 0.7.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+717f5df2c308dfb4b7b8e6c002c11fe8269c4011" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: version requirement `0.1.20+minimap2.2.28` for dependency `minimap2` includes semver metadata which will be ignored, removing the metadata is recommended to avoid confusion
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded needletail v0.5.1
[INFO] [stderr]   Downloaded gskits v0.5.0
[INFO] [stderr]   Downloaded buffer-redux v1.0.2
[INFO] [stderr]   Downloaded minimap2 v0.1.20+minimap2.2.28
[INFO] [stderr]   Downloaded rust-htslib v0.47.1
[INFO] [stderr]   Downloaded bio v1.6.0
[INFO] [stderr]   Downloaded minimap2-sys v0.1.19+minimap2.2.28
[INFO] [stderr]   Downloaded hts-sys v2.1.4
[INFO] [stderr]   Downloaded openssl-src v300.4.0+3.4.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+717f5df2c308dfb4b7b8e6c002c11fe8269c4011" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 57b806c724377e925e3cee50124426b2403c75867a398a515ec58d0e4b81e464
[INFO] running `Command { std: "docker" "start" "-a" "57b806c724377e925e3cee50124426b2403c75867a398a515ec58d0e4b81e464", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "57b806c724377e925e3cee50124426b2403c75867a398a515ec58d0e4b81e464", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "57b806c724377e925e3cee50124426b2403c75867a398a515ec58d0e4b81e464", kill_on_drop: false }`
[INFO] [stdout] 57b806c724377e925e3cee50124426b2403c75867a398a515ec58d0e4b81e464
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+717f5df2c308dfb4b7b8e6c002c11fe8269c4011" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5c6fdc01f52317270b1ec2aa2dcc28946cb5aad5653090288e008cf306984a37
[INFO] running `Command { std: "docker" "start" "-a" "5c6fdc01f52317270b1ec2aa2dcc28946cb5aad5653090288e008cf306984a37", kill_on_drop: false }`
[INFO] [stderr] warning: version requirement `0.1.20+minimap2.2.28` for dependency `minimap2` includes semver metadata which will be ignored, removing the metadata is recommended to avoid confusion
[INFO] [stderr]    Compiling proc-macro2 v1.0.89
[INFO] [stderr]    Compiling unicode-ident v1.0.13
[INFO] [stderr]    Compiling libc v0.2.162
[INFO] [stderr]    Compiling libm v0.2.11
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling regex-syntax v0.8.5
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling libloading v0.8.5
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling either v1.13.0
[INFO] [stderr]    Compiling matrixmultiply v0.3.9
[INFO] [stderr]     Checking bytemuck v1.19.0
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling bitflags v2.6.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]     Checking itoa v1.0.11
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]     Checking safe_arch v0.7.2
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling portable-atomic v1.9.0
[INFO] [stderr]     Checking percent-encoding v2.3.1
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]     Checking anstyle-parse v0.2.6
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[INFO] [stderr]     Checking anstyle-query v1.1.2
[INFO] [stderr]     Checking form_urlencoded v1.2.1
[INFO] [stderr]     Checking anstyle v1.0.10
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking colorchoice v1.0.3
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling serde_json v1.0.132
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking buffer-redux v1.0.2
[INFO] [stderr]     Checking csv-core v0.1.11
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[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking wide v0.7.28
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[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking unicode-width v0.2.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking clap_lex v0.7.3
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]     Checking number_prefix v0.4.0
[INFO] [stderr]     Checking num_threads v0.1.7
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]    Compiling quote v1.0.37
[INFO] [stderr]     Checking petgraph v0.6.5
[INFO] [stderr]     Checking clap_builder v4.5.21
[INFO] [stderr]     Checking uuid v1.11.0
[INFO] [stderr]     Checking bit-set v0.5.3
[INFO] [stderr]     Checking needletail v0.5.1
[INFO] [stderr]     Checking itertools v0.11.0
[INFO] [stderr]     Checking crossbeam-queue v0.3.11
[INFO] [stderr]    Compiling syn v2.0.87
[INFO] [stderr]    Compiling jobserver v0.1.32
[INFO] [stderr]     Checking getrandom v0.2.15
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking console v0.15.8
[INFO] [stderr]     Checking time v0.3.36
[INFO] [stderr]     Checking num_cpus v1.16.0
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking crossbeam-channel v0.5.13
[INFO] [stderr]    Compiling cc v1.2.1
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]    Compiling regex-automata v0.4.9
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking indicatif v0.17.9
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking ordered-float v3.9.2
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking chrono v0.4.38
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking strum v0.25.0
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking simdutf8 v0.1.5
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]     Checking crossbeam v0.8.4
[INFO] [stderr]     Checking rayon v1.10.0
[INFO] [stderr]    Compiling cmake v0.1.51
[INFO] [stderr]    Compiling openssl-src v300.4.0+3.4.0
[INFO] [stderr]    Compiling libz-sys v1.1.20
[INFO] [stderr]    Compiling openssl-sys v0.9.104
[INFO] [stderr]    Compiling curl-sys v0.4.78+curl-8.11.0
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling minimap2-sys v0.1.19+minimap2.2.28
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling synstructure v0.13.1
[INFO] [stderr]    Compiling zerofrom-derive v0.1.4
[INFO] [stderr]    Compiling yoke-derive v0.7.4
[INFO] [stderr]    Compiling zerovec-derive v0.10.3
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling icu_provider_macros v1.5.0
[INFO] [stderr]    Compiling serde_derive v1.0.215
[INFO] [stderr]    Compiling zerocopy-derive v0.7.35
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling tracing-attributes v0.1.27
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling clap_derive v4.5.18
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]     Checking minimap2 v0.1.20+minimap2.2.28
[INFO] [stderr]     Checking zerocopy v0.7.35
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking zerofrom v0.1.4
[INFO] [stderr]     Checking tracing v0.1.40
[INFO] [stderr]     Checking yoke v0.7.4
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking zerovec v0.10.4
[INFO] [stderr]     Checking ppv-lite86 v0.2.20
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking clap v4.5.21
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking tinystr v0.7.6
[INFO] [stderr]     Checking icu_collections v1.5.0
[INFO] [stderr]     Checking icu_locid v1.5.0
[INFO] [stderr]     Checking serde v1.0.215
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking icu_provider v1.5.0
[INFO] [stderr]     Checking nalgebra v0.29.0
[INFO] [stderr]     Checking icu_locid_transform v1.5.0
[INFO] [stderr]     Checking icu_properties v1.5.1
[INFO] [stderr]    Compiling hts-sys v2.1.4
[INFO] [stderr]     Checking csv v1.3.1
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking multimap v0.9.1
[INFO] [stderr]     Checking bv v0.11.1
[INFO] [stderr]     Checking tracing-serde v0.1.3
[INFO] [stderr]     Checking icu_normalizer v1.5.0
[INFO] [stderr]     Checking tracing-subscriber v0.3.18
[INFO] [stderr]     Checking idna_adapter v1.2.0
[INFO] [stderr]     Checking idna v1.0.3
[INFO] [stderr]     Checking url v2.5.3
[INFO] [stderr]     Checking statrs v0.16.1
[INFO] [stderr]     Checking bio v1.6.0
[INFO] [stderr]     Checking rust-htslib v0.47.1
[INFO] [stderr]     Checking gskits v0.5.0
[INFO] [stderr]     Checking mm2 v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 55.31s
[INFO] running `Command { std: "docker" "inspect" "5c6fdc01f52317270b1ec2aa2dcc28946cb5aad5653090288e008cf306984a37", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5c6fdc01f52317270b1ec2aa2dcc28946cb5aad5653090288e008cf306984a37", kill_on_drop: false }`
[INFO] [stdout] 5c6fdc01f52317270b1ec2aa2dcc28946cb5aad5653090288e008cf306984a37