[INFO] cloning repository https://github.com/broadinstitute/abpoa-rs [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/broadinstitute/abpoa-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbroadinstitute%2Fabpoa-rs", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbroadinstitute%2Fabpoa-rs'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 7a9a837a2dff10ed53f4c04f4d786bce07dc37fc [INFO] checking broadinstitute/abpoa-rs/7a9a837a2dff10ed53f4c04f4d786bce07dc37fc against master#717f5df2c308dfb4b7b8e6c002c11fe8269c4011 for pr-133274 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbroadinstitute%2Fabpoa-rs" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/broadinstitute/abpoa-rs on toolchain 717f5df2c308dfb4b7b8e6c002c11fe8269c4011 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+717f5df2c308dfb4b7b8e6c002c11fe8269c4011" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/broadinstitute/abpoa-rs [INFO] finished tweaking git repo https://github.com/broadinstitute/abpoa-rs [INFO] tweaked toml for git repo https://github.com/broadinstitute/abpoa-rs written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/broadinstitute/abpoa-rs already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+717f5df2c308dfb4b7b8e6c002c11fe8269c4011" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+717f5df2c308dfb4b7b8e6c002c11fe8269c4011" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1884cb9a2fc067dc81a9c766a07242808befbe36c62b2e89b53481e1d8218dd7 [INFO] running `Command { std: "docker" "start" "-a" "1884cb9a2fc067dc81a9c766a07242808befbe36c62b2e89b53481e1d8218dd7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1884cb9a2fc067dc81a9c766a07242808befbe36c62b2e89b53481e1d8218dd7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1884cb9a2fc067dc81a9c766a07242808befbe36c62b2e89b53481e1d8218dd7", kill_on_drop: false }` [INFO] [stdout] 1884cb9a2fc067dc81a9c766a07242808befbe36c62b2e89b53481e1d8218dd7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+717f5df2c308dfb4b7b8e6c002c11fe8269c4011" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e281748ad1b5798135a4dca74eb1a2c58a680947b26849989b4af825d0516f6e [INFO] running `Command { std: "docker" "start" "-a" "e281748ad1b5798135a4dca74eb1a2c58a680947b26849989b4af825d0516f6e", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Compiling shlex v1.3.0 [INFO] [stderr] Compiling unicode-ident v1.0.13 [INFO] [stderr] Compiling libc v0.2.158 [INFO] [stderr] Compiling prettyplease v0.2.22 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling regex-syntax v0.8.4 [INFO] [stderr] Compiling cc v1.1.18 [INFO] [stderr] Compiling libloading v0.8.5 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling pkg-config v0.3.30 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling quote v1.0.37 [INFO] [stderr] Compiling bindgen v0.70.1 [INFO] [stderr] Compiling syn v2.0.77 [INFO] [stderr] Compiling itertools v0.13.0 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling bitflags v2.6.0 [INFO] [stderr] Compiling log v0.4.22 [INFO] [stderr] Compiling regex-automata v0.4.7 [INFO] [stderr] Compiling libz-sys v1.1.20 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling regex v1.10.6 [INFO] [stderr] Compiling abpoa-sys v0.1.1 (/opt/rustwide/workdir/abpoa-sys) [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: LC_ALL="C" PATH="/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/bin:/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/bin/self-contained:/opt/rustwide/cargo-home/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustcCbet7R/symbols.o" "/opt/rustwide/target/debug/build/abpoa-sys-7981e5039d2d6979/build_script_build-7981e5039d2d6979.build_script_build.2bc1a9991e7a93cd-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/abpoa-sys-7981e5039d2d6979/build_script_build-7981e5039d2d6979.0jheu2lvb8ao017anl8k7j5dj.rcgu.o" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/libbindgen-c825080c99e4c9ff.rlib" "/opt/rustwide/target/debug/deps/libprettyplease-1837cdc67f9c667c.rlib" "/opt/rustwide/target/debug/deps/librustc_hash-27694c26883e36a3.rlib" "/opt/rustwide/target/debug/deps/libregex-2aeabb51c0001d63.rlib" "/opt/rustwide/target/debug/deps/libregex_automata-84bdc58f5efc95b0.rlib" "/opt/rustwide/target/debug/deps/libregex_syntax-f3bd2c09aaba6b9f.rlib" "/opt/rustwide/target/debug/deps/libitertools-4b352ac1d66f0f62.rlib" "/opt/rustwide/target/debug/deps/libeither-11d8a197b77b266a.rlib" "/opt/rustwide/target/debug/deps/libcexpr-bd8f3feecf20fbaf.rlib" "/opt/rustwide/target/debug/deps/libnom-55cf561f7680512f.rlib" "/opt/rustwide/target/debug/deps/libmemchr-806f1f6be488454b.rlib" "/opt/rustwide/target/debug/deps/libclang_sys-897bb3ecf08d003d.rlib" "/opt/rustwide/target/debug/deps/liblibloading-b1780ac76b809838.rlib" "/opt/rustwide/target/debug/deps/libcfg_if-d0d88294126870fb.rlib" "/opt/rustwide/target/debug/deps/liblibc-b2252f33c52acdaf.rlib" "/opt/rustwide/target/debug/deps/libsyn-5fb5a278fac61a3b.rlib" "/opt/rustwide/target/debug/deps/liblog-59a169bde0af823e.rlib" "/opt/rustwide/target/debug/deps/libquote-a20b8eb4f6c7e3df.rlib" "/opt/rustwide/target/debug/deps/libproc_macro2-a14d4cd6dc5b6abc.rlib" "/opt/rustwide/target/debug/deps/libunicode_ident-c1d05c67d34096ea.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libproc_macro-4bba90ad31aeed7b.rlib" "/opt/rustwide/target/debug/deps/libbitflags-75c709899afc5acc.rlib" "/opt/rustwide/target/debug/deps/libcc-4e88c4c5166b0d54.rlib" "/opt/rustwide/target/debug/deps/libshlex-f4c3659040844f7b.rlib" "/opt/rustwide/target/debug/deps/libglob-ead686df6db2d0d2.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-81d925df099611ec.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-b8448eab142ef565.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-d25a941a4df9caf8.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libmemchr-ade6936d448d6794.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-0a175cebd11e144e.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-127f0ef4dcbf7436.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-d034686f0f0f9113.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd_detect-edb57e0099b607a2.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-00d71dca83e6b3e6.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-f9f91ef79bc3c342.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-226b4b3bb3c90aef.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-a1e4d788e09d8a83.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-cfe9e45cb365e7f0.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-a214d3ea58225c02.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-8b7cc309868a115a.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-9621b8f524eebb06.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-395a38b8e0851c9b.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-d453bab70303062c.rlib" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-619eefe14aaf54f4.rlib" "-Wl,-Bdynamic" "-ldl" "-lc" "-lm" "-lrt" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-B/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/rustup-home/toolchains/717f5df2c308dfb4b7b8e6c002c11fe8269c4011/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/build/abpoa-sys-7981e5039d2d6979/build_script_build-7981e5039d2d6979" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 7 [Bus error], core dumped [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `abpoa-sys` (build script) due to 1 previous error [INFO] running `Command { std: "docker" "inspect" "e281748ad1b5798135a4dca74eb1a2c58a680947b26849989b4af825d0516f6e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e281748ad1b5798135a4dca74eb1a2c58a680947b26849989b4af825d0516f6e", kill_on_drop: false }` [INFO] [stdout] e281748ad1b5798135a4dca74eb1a2c58a680947b26849989b4af825d0516f6e