[INFO] fetching crate noodles-sam 0.65.0... [INFO] checking noodles-sam-0.65.0 against try#da25749bf5e6ba5ed862ff361c19afff2a986b2d for pr-132712 [INFO] extracting crate noodles-sam 0.65.0 into /workspace/builds/worker-3-tc2/source [INFO] validating manifest of crates.io crate noodles-sam 0.65.0 on toolchain da25749bf5e6ba5ed862ff361c19afff2a986b2d [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+da25749bf5e6ba5ed862ff361c19afff2a986b2d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate noodles-sam 0.65.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate noodles-sam 0.65.0 [INFO] tweaked toml for crates.io crate noodles-sam 0.65.0 written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] crate crates.io crate noodles-sam 0.65.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+da25749bf5e6ba5ed862ff361c19afff2a986b2d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+da25749bf5e6ba5ed862ff361c19afff2a986b2d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f1656e2cd424cd5e637881c7f308b51d7af2511090c5b8d0c106aada060a95f3 [INFO] running `Command { std: "docker" "start" "-a" "f1656e2cd424cd5e637881c7f308b51d7af2511090c5b8d0c106aada060a95f3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f1656e2cd424cd5e637881c7f308b51d7af2511090c5b8d0c106aada060a95f3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f1656e2cd424cd5e637881c7f308b51d7af2511090c5b8d0c106aada060a95f3", kill_on_drop: false }` [INFO] [stdout] f1656e2cd424cd5e637881c7f308b51d7af2511090c5b8d0c106aada060a95f3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=allow" "-e" "RUSTDOCFLAGS=--cap-lints=allow" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+da25749bf5e6ba5ed862ff361c19afff2a986b2d" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 84d139c9b185e1f2b8a0b2dcb5358e45872c48fd2b7607357f809793a0540571 [INFO] running `Command { std: "docker" "start" "-a" "84d139c9b185e1f2b8a0b2dcb5358e45872c48fd2b7607357f809793a0540571", kill_on_drop: false }` [INFO] [stderr] Copying to /tmp/fixit [INFO] [stderr] Running `cargo fix --edition` [INFO] [stderr] Migrating Cargo.toml from 2021 edition to 2024 [INFO] [stderr] Checking lexical-util v1.0.3 [INFO] [stderr] Compiling crossbeam-utils v0.8.20 [INFO] [stderr] Checking hashbrown v0.14.5 [INFO] [stderr] Checking bytes v1.7.2 [INFO] [stderr] Checking bit-vec v0.8.0 [INFO] [stderr] Checking pin-project-lite v0.2.14 [INFO] [stderr] Checking bstr v1.10.0 [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Checking flate2 v1.0.33 [INFO] [stderr] Checking noodles-core v0.15.0 [INFO] [stderr] Checking lexical-write-integer v1.0.2 [INFO] [stderr] Checking lexical-parse-integer v1.0.2 [INFO] [stderr] Compiling quote v1.0.37 [INFO] [stderr] Checking lexical-parse-float v1.0.2 [INFO] [stderr] Checking indexmap v2.5.0 [INFO] [stderr] Checking lexical-write-float v1.0.2 [INFO] [stderr] Compiling syn v2.0.77 [INFO] [stderr] Checking crossbeam-channel v0.5.13 [INFO] [stderr] Checking noodles-bgzf v0.33.0 [INFO] [stderr] Checking lexical-core v1.0.2 [INFO] [stderr] Checking noodles-csi v0.39.0 [INFO] [stderr] Checking noodles-sam v0.65.0 (/tmp/fixit) [INFO] [stderr] Migrating src/lib.rs from 2021 edition to 2024 [INFO] [stderr] Compiling tokio-macros v2.4.0 [INFO] [stderr] Fixed src/io/indexed_reader.rs (1 fix) [INFO] [stderr] Fixed src/record/data/field/value/base_modifications/parser/group.rs (2 fixes) [INFO] [stderr] Fixed src/io/reader.rs (2 fixes) [INFO] [stderr] Checking tokio v1.40.0 [INFO] [stderr] Migrating examples/sam_count.rs from 2021 edition to 2024 [INFO] [stderr] Migrating examples/sam_index.rs from 2021 edition to 2024 [INFO] [stderr] Migrating examples/sam_query.rs from 2021 edition to 2024 [INFO] [stderr] Migrating examples/sam_read_header.rs from 2021 edition to 2024 [INFO] [stderr] Migrating examples/sam_write.rs from 2021 edition to 2024 [INFO] [stderr] Migrating examples/sam_view.rs from 2021 edition to 2024 [INFO] [stderr] Migrating examples/sam_reheader.rs from 2021 edition to 2024 [INFO] [stderr] Migrating examples/sam_filter_data.rs from 2021 edition to 2024 [INFO] [stderr] Fixed src/record/data/field/value/array.rs (7 fixes) [INFO] [stderr] Fixed src/record/data/field/value.rs (1 fix) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 8.29s [INFO] [stderr] Running `cargo check` to verify 2024 [INFO] [stderr] Checking noodles-sam v0.65.0 (/tmp/fixit) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1.40s [INFO] running `Command { std: "docker" "inspect" "84d139c9b185e1f2b8a0b2dcb5358e45872c48fd2b7607357f809793a0540571", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "84d139c9b185e1f2b8a0b2dcb5358e45872c48fd2b7607357f809793a0540571", kill_on_drop: false }` [INFO] [stdout] 84d139c9b185e1f2b8a0b2dcb5358e45872c48fd2b7607357f809793a0540571