[INFO] fetching crate exon-gtf 0.32.2... [INFO] testing exon-gtf-0.32.2 against try#f23b22458132fb20faeb8a915b1c252478696f25 for pr-131095 [INFO] extracting crate exon-gtf 0.32.2 into /workspace/builds/worker-3-tc2/source [INFO] validating manifest of crates.io crate exon-gtf 0.32.2 on toolchain f23b22458132fb20faeb8a915b1c252478696f25 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f23b22458132fb20faeb8a915b1c252478696f25" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate exon-gtf 0.32.2 [INFO] finished tweaking crates.io crate exon-gtf 0.32.2 [INFO] tweaked toml for crates.io crate exon-gtf 0.32.2 written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f23b22458132fb20faeb8a915b1c252478696f25" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Locking 257 packages to latest compatible versions [INFO] [stderr] Adding arrow v52.2.0 (available: v53.0.0) [INFO] [stderr] Adding noodles v0.79.0 (available: v0.83.0) [INFO] [stderr] Adding object_store v0.10.2 (available: v0.11.0) [INFO] [stderr] Adding zstd-sys v2.0.12+zstd.1.5.6 (available: v2.0.13+zstd.1.5.6) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f23b22458132fb20faeb8a915b1c252478696f25" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:6252d7ea7fb8caaf7af6d800c5fb250a9cd862b9a7f9508afb3c54fa7fe1102e" "/opt/rustwide/cargo-home/bin/cargo" "+f23b22458132fb20faeb8a915b1c252478696f25" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 98acc0592675cb55ffe6d3b3ca987b02932a4d016c9aad4c9be9bb84e3e90780 [INFO] running `Command { std: "docker" "start" "-a" "98acc0592675cb55ffe6d3b3ca987b02932a4d016c9aad4c9be9bb84e3e90780", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "98acc0592675cb55ffe6d3b3ca987b02932a4d016c9aad4c9be9bb84e3e90780", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "98acc0592675cb55ffe6d3b3ca987b02932a4d016c9aad4c9be9bb84e3e90780", kill_on_drop: false }` [INFO] [stdout] 98acc0592675cb55ffe6d3b3ca987b02932a4d016c9aad4c9be9bb84e3e90780 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:6252d7ea7fb8caaf7af6d800c5fb250a9cd862b9a7f9508afb3c54fa7fe1102e" "/opt/rustwide/cargo-home/bin/cargo" "+f23b22458132fb20faeb8a915b1c252478696f25" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 59b4fdfff72fe126fc7fcbbdf7cc52b4def4bcbfd1042ba323f34eb78bb7448b [INFO] running `Command { std: "docker" "start" "-a" "59b4fdfff72fe126fc7fcbbdf7cc52b4def4bcbfd1042ba323f34eb78bb7448b", kill_on_drop: false }` [INFO] [stderr] Compiling libm v0.2.8 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling pkg-config v0.3.31 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling phf_shared v0.11.2 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Compiling arrow-schema v52.2.0 [INFO] [stderr] Compiling rustversion v1.0.17 [INFO] [stderr] Compiling jobserver v0.1.32 [INFO] [stderr] Compiling lexical-util v0.8.5 [INFO] [stderr] Compiling semver v1.0.23 [INFO] [stderr] Compiling adler2 v2.0.0 [INFO] [stderr] Compiling syn v2.0.79 [INFO] [stderr] Compiling crc32fast v1.4.2 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling phf v0.11.2 [INFO] [stderr] Compiling miniz_oxide v0.8.0 [INFO] [stderr] Compiling serde v1.0.210 [INFO] [stderr] Compiling cc v1.1.24 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling rustc_version v0.4.1 [INFO] [stderr] Compiling futures-channel v0.3.30 [INFO] [stderr] Compiling zstd-safe v7.2.1 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling lexical-write-integer v0.8.5 [INFO] [stderr] Compiling lexical-parse-integer v0.8.6 [INFO] [stderr] Compiling unicode-normalization v0.1.24 [INFO] [stderr] Compiling twox-hash v1.6.3 [INFO] [stderr] Compiling phf_generator v0.11.2 [INFO] [stderr] Compiling lexical-parse-float v0.8.5 [INFO] [stderr] Compiling lexical-write-float v0.8.5 [INFO] [stderr] Compiling flate2 v1.0.34 [INFO] [stderr] Compiling phf_codegen v0.11.2 [INFO] [stderr] Compiling flatbuffers v24.3.25 [INFO] [stderr] Compiling alloc-no-stdlib v2.0.4 [INFO] [stderr] Compiling unicode-bidi v0.3.15 [INFO] [stderr] Compiling heck v0.4.1 [INFO] [stderr] Compiling alloc-stdlib v0.2.2 [INFO] [stderr] Compiling lz4_flex v0.11.3 [INFO] [stderr] Compiling regex-automata v0.4.8 [INFO] [stderr] Compiling csv-core v0.1.11 [INFO] [stderr] Compiling snap v1.1.1 [INFO] [stderr] Compiling lexical-core v0.8.5 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Compiling idna v0.5.0 [INFO] [stderr] Compiling brotli-decompressor v4.0.1 [INFO] [stderr] Compiling walkdir v2.5.0 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling chrono v0.4.38 [INFO] [stderr] Compiling half v2.4.1 [INFO] [stderr] Compiling atoi v2.0.0 [INFO] [stderr] Compiling ordered-float v2.10.1 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling integer-encoding v3.0.4 [INFO] [stderr] Compiling url v2.5.2 [INFO] [stderr] Compiling lazy_static v1.5.0 [INFO] [stderr] Compiling thrift v0.17.0 [INFO] [stderr] Compiling num-bigint v0.4.6 [INFO] [stderr] Compiling num-iter v0.1.45 [INFO] [stderr] Compiling zstd-sys v2.0.12+zstd.1.5.6 [INFO] [stderr] Compiling seq-macro v0.3.5 [INFO] [stderr] Compiling num_cpus v1.16.0 [INFO] [stderr] Compiling rustix v0.38.37 [INFO] [stderr] Compiling bitflags v2.6.0 [INFO] [stderr] Compiling regex v1.11.0 [INFO] [stderr] Compiling linux-raw-sys v0.4.14 [INFO] [stderr] Compiling fastrand v2.1.1 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Compiling parse-zoneinfo v0.3.1 [INFO] [stderr] Compiling fixedbitset v0.4.2 [INFO] [stderr] Compiling brotli v6.0.0 [INFO] [stderr] Compiling subtle v2.6.1 [INFO] [stderr] Compiling blake3 v1.5.4 [INFO] [stderr] Compiling petgraph v0.6.5 [INFO] [stderr] Compiling chrono-tz-build v0.3.0 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling serde_json v1.0.128 [INFO] [stderr] Compiling csv v1.3.0 [INFO] [stderr] Compiling digest v0.10.7 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling num v0.4.3 [INFO] [stderr] Compiling arrow-buffer v52.2.0 [INFO] [stderr] Compiling chrono-tz v0.9.0 [INFO] [stderr] Compiling constant_time_eq v0.3.1 [INFO] [stderr] Compiling arrayref v0.3.9 [INFO] [stderr] Compiling sha2 v0.10.8 [INFO] [stderr] Compiling blake2 v0.10.6 [INFO] [stderr] Compiling md-5 v0.10.6 [INFO] [stderr] Compiling crossbeam-channel v0.5.13 [INFO] [stderr] Compiling arrow-data v52.2.0 [INFO] [stderr] Compiling snafu-derive v0.7.5 [INFO] [stderr] Compiling uuid v1.10.0 [INFO] [stderr] Compiling bstr v1.10.0 [INFO] [stderr] Compiling unicode-segmentation v1.12.0 [INFO] [stderr] Compiling noodles-bgzf v0.32.0 [INFO] [stderr] Compiling bit-vec v0.7.0 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling tempfile v3.13.0 [INFO] [stderr] Compiling noodles-core v0.15.0 [INFO] [stderr] Compiling noodles-csi v0.37.0 [INFO] [stderr] Compiling zerocopy-derive v0.7.35 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling tokio-macros v2.4.0 [INFO] [stderr] Compiling futures-macro v0.3.30 [INFO] [stderr] Compiling tracing-attributes v0.1.27 [INFO] [stderr] Compiling async-trait v0.1.83 [INFO] [stderr] Compiling sqlparser_derive v0.2.2 [INFO] [stderr] Compiling noodles-gtf v0.30.0 [INFO] [stderr] Compiling noodles v0.79.0 [INFO] [stderr] Compiling tokio v1.40.0 [INFO] [stderr] Compiling sqlparser v0.49.0 [INFO] [stderr] Compiling zerocopy v0.7.35 [INFO] [stderr] Compiling futures-util v0.3.30 [INFO] [stderr] Compiling snafu v0.7.5 [INFO] [stderr] Compiling tracing v0.1.40 [INFO] [stderr] Compiling strum v0.26.3 [INFO] [stderr] Compiling comfy-table v7.1.1 [INFO] [stderr] Compiling ppv-lite86 v0.2.20 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling dashmap v6.1.0 [INFO] [stderr] Compiling arrow-array v52.2.0 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling datafusion-common-runtime v41.0.0 [INFO] [stderr] Compiling tokio-util v0.7.12 [INFO] [stderr] Compiling zstd v0.13.2 [INFO] [stderr] Compiling futures-executor v0.3.30 [INFO] [stderr] Compiling futures v0.3.30 [INFO] [stderr] Compiling async-compression v0.4.12 [INFO] [stderr] Compiling object_store v0.10.2 [INFO] [stderr] Compiling arrow-select v52.2.0 [INFO] [stderr] Compiling arrow-arith v52.2.0 [INFO] [stderr] Compiling arrow-row v52.2.0 [INFO] [stderr] Compiling arrow-cast v52.2.0 [INFO] [stderr] Compiling arrow-string v52.2.0 [INFO] [stderr] Compiling arrow-ord v52.2.0 [INFO] [stderr] Compiling arrow-ipc v52.2.0 [INFO] [stderr] Compiling arrow-json v52.2.0 [INFO] [stderr] Compiling arrow-csv v52.2.0 [INFO] [stderr] Compiling arrow v52.2.0 [INFO] [stderr] Compiling parquet v52.2.0 [INFO] [stderr] Compiling datafusion-common v41.0.0 [INFO] [stderr] Compiling datafusion-expr v41.0.0 [INFO] [stderr] Compiling datafusion-execution v41.0.0 [INFO] [stderr] Compiling datafusion-physical-expr-common v41.0.0 [INFO] [stderr] Compiling datafusion-sql v41.0.0 [INFO] [stderr] Compiling datafusion-functions v41.0.0 [INFO] [stderr] Compiling datafusion-functions-aggregate v41.0.0 [INFO] [stderr] Compiling datafusion-physical-expr v41.0.0 [INFO] [stderr] Compiling datafusion-optimizer v41.0.0 [INFO] [stderr] Compiling datafusion-physical-plan v41.0.0 [INFO] [stderr] Compiling datafusion-functions-nested v41.0.0 [INFO] [stderr] Compiling datafusion-physical-optimizer v41.0.0 [INFO] [stderr] Compiling datafusion-catalog v41.0.0 [INFO] [stderr] Compiling datafusion v41.0.0 [INFO] [stderr] Compiling exon-common v0.32.2 [INFO] [stderr] Compiling exon-gtf v0.32.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 17s [INFO] running `Command { std: "docker" "inspect" "59b4fdfff72fe126fc7fcbbdf7cc52b4def4bcbfd1042ba323f34eb78bb7448b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "59b4fdfff72fe126fc7fcbbdf7cc52b4def4bcbfd1042ba323f34eb78bb7448b", kill_on_drop: false }` [INFO] [stdout] 59b4fdfff72fe126fc7fcbbdf7cc52b4def4bcbfd1042ba323f34eb78bb7448b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:6252d7ea7fb8caaf7af6d800c5fb250a9cd862b9a7f9508afb3c54fa7fe1102e" "/opt/rustwide/cargo-home/bin/cargo" "+f23b22458132fb20faeb8a915b1c252478696f25" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5a505ab98abdfc8e1a693b482681f79e893809d00536313359ed99cdee78ba2c [INFO] running `Command { std: "docker" "start" "-a" "5a505ab98abdfc8e1a693b482681f79e893809d00536313359ed99cdee78ba2c", kill_on_drop: false }` [INFO] [stderr] Compiling exon-gtf v0.32.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 2.68s [INFO] running `Command { std: "docker" "inspect" "5a505ab98abdfc8e1a693b482681f79e893809d00536313359ed99cdee78ba2c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5a505ab98abdfc8e1a693b482681f79e893809d00536313359ed99cdee78ba2c", kill_on_drop: false }` [INFO] [stdout] 5a505ab98abdfc8e1a693b482681f79e893809d00536313359ed99cdee78ba2c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:6252d7ea7fb8caaf7af6d800c5fb250a9cd862b9a7f9508afb3c54fa7fe1102e" "/opt/rustwide/cargo-home/bin/cargo" "+f23b22458132fb20faeb8a915b1c252478696f25" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] ba07cd3df00e1163bac693215003f23f94ce1615be3d522d562ee4aafa239876 [INFO] running `Command { std: "docker" "start" "-a" "ba07cd3df00e1163bac693215003f23f94ce1615be3d522d562ee4aafa239876", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.16s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/exon_gtf-d4c60a7574251f37) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests exon_gtf [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "ba07cd3df00e1163bac693215003f23f94ce1615be3d522d562ee4aafa239876", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ba07cd3df00e1163bac693215003f23f94ce1615be3d522d562ee4aafa239876", kill_on_drop: false }` [INFO] [stdout] ba07cd3df00e1163bac693215003f23f94ce1615be3d522d562ee4aafa239876