[INFO] cloning repository https://github.com/davidlougheed/strkit_rust_ext [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/davidlougheed/strkit_rust_ext" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdavidlougheed%2Fstrkit_rust_ext", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdavidlougheed%2Fstrkit_rust_ext'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] b7ae178e2e9213623a855c095802cb5ee07a59bc [INFO] checking davidlougheed/strkit_rust_ext/b7ae178e2e9213623a855c095802cb5ee07a59bc against master#5fe0e40e05f2d0408c6a292b160f96d595aedfbc for pr-130367 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdavidlougheed%2Fstrkit_rust_ext" "/workspace/builds/worker-1-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/davidlougheed/strkit_rust_ext on toolchain 5fe0e40e05f2d0408c6a292b160f96d595aedfbc [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5fe0e40e05f2d0408c6a292b160f96d595aedfbc" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/davidlougheed/strkit_rust_ext [INFO] finished tweaking git repo https://github.com/davidlougheed/strkit_rust_ext [INFO] tweaked toml for git repo https://github.com/davidlougheed/strkit_rust_ext written to /workspace/builds/worker-1-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/davidlougheed/strkit_rust_ext already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5fe0e40e05f2d0408c6a292b160f96d595aedfbc" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded parasail-rs v0.7.4 [INFO] [stderr] Downloaded nalgebra-macros v0.2.2 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded bit-vec v0.8.0 [INFO] [stderr] Downloaded bit-set v0.8.0 [INFO] [stderr] Downloaded portable-atomic-util v0.2.2 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded bytemuck v1.18.0 [INFO] [stderr] Downloaded safe_arch v0.7.2 [INFO] [stderr] Downloaded wide v0.7.28 [INFO] [stderr] Downloaded numpy v0.21.0 [INFO] [stderr] Downloaded statrs v0.17.1 [INFO] [stderr] Downloaded rust-htslib v0.47.0 [INFO] [stderr] Downloaded bio v2.0.3 [INFO] [stderr] Downloaded ndarray v0.16.1 [INFO] [stderr] Downloaded nalgebra v0.32.6 [INFO] [stderr] Downloaded libz-sys v1.1.20 [INFO] [stderr] Downloaded curl-sys v0.4.75+curl-8.10.0 [INFO] [stderr] Downloaded libparasail-sys v0.1.6 [INFO] [stderr] Downloaded hts-sys v2.1.4 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded openssl-src v300.3.2+3.3.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:96c0aa5895ecf336b730ef27bcdde6e21027415df19888aad3cf1448e5d65d90" "/opt/rustwide/cargo-home/bin/cargo" "+5fe0e40e05f2d0408c6a292b160f96d595aedfbc" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 53ef9feb2d608945798b01978a2524fda38e7ad3106a0416aef63351a9abf05f [INFO] running `Command { std: "docker" "start" "-a" "53ef9feb2d608945798b01978a2524fda38e7ad3106a0416aef63351a9abf05f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "53ef9feb2d608945798b01978a2524fda38e7ad3106a0416aef63351a9abf05f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "53ef9feb2d608945798b01978a2524fda38e7ad3106a0416aef63351a9abf05f", kill_on_drop: false }` [INFO] [stdout] 53ef9feb2d608945798b01978a2524fda38e7ad3106a0416aef63351a9abf05f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:96c0aa5895ecf336b730ef27bcdde6e21027415df19888aad3cf1448e5d65d90" "/opt/rustwide/cargo-home/bin/cargo" "+5fe0e40e05f2d0408c6a292b160f96d595aedfbc" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f0e0f0eae41e98c9645a1c85ab1fb52007ebb740514573a8e8190b0064ebcd21 [INFO] running `Command { std: "docker" "start" "-a" "f0e0f0eae41e98c9645a1c85ab1fb52007ebb740514573a8e8190b0064ebcd21", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.158 [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling unicode-ident v1.0.13 [INFO] [stderr] Compiling autocfg v1.3.0 [INFO] [stderr] Compiling shlex v1.3.0 [INFO] [stderr] Compiling pkg-config v0.3.30 [INFO] [stderr] Compiling libm v0.2.8 [INFO] [stderr] Compiling target-lexicon v0.12.16 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Compiling prettyplease v0.2.22 [INFO] [stderr] Compiling rustix v0.38.37 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling linux-raw-sys v0.4.14 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling quote v1.0.37 [INFO] [stderr] Compiling pyo3-build-config v0.21.2 [INFO] [stderr] Compiling bitflags v2.6.0 [INFO] [stderr] Compiling syn v2.0.77 [INFO] [stderr] Compiling jobserver v0.1.32 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling regex-syntax v0.8.4 [INFO] [stderr] Compiling cc v1.1.21 [INFO] [stderr] Compiling libloading v0.8.5 [INFO] [stderr] Compiling once_cell v1.19.0 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling bindgen v0.69.4 [INFO] [stderr] Checking byteorder v1.5.0 [INFO] [stderr] Compiling home v0.5.9 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Compiling regex-automata v0.4.7 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling log v0.4.22 [INFO] [stderr] Compiling lazy_static v1.5.0 [INFO] [stderr] Compiling which v4.4.2 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling openssl-src v300.3.2+3.3.2 [INFO] [stderr] Compiling cmake v0.1.51 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Compiling openssl-sys v0.9.103 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Compiling libz-sys v1.1.20 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking getrandom v0.2.15 [INFO] [stderr] Compiling serde v1.0.210 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling thiserror v1.0.63 [INFO] [stderr] Compiling regex v1.10.6 [INFO] [stderr] Compiling paste v1.0.15 [INFO] [stderr] Checking bytemuck v1.18.0 [INFO] [stderr] Compiling rustversion v1.0.17 [INFO] [stderr] Checking safe_arch v0.7.2 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling curl-sys v0.4.75+curl-8.10.0 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling pyo3-ffi v0.21.2 [INFO] [stderr] Compiling lock_api v0.4.12 [INFO] [stderr] Compiling parking_lot_core v0.9.10 [INFO] [stderr] Compiling typenum v1.17.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Checking tinyvec v1.8.0 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling zerocopy-derive v0.7.35 [INFO] [stderr] Compiling serde_derive v1.0.210 [INFO] [stderr] Compiling thiserror-impl v1.0.63 [INFO] [stderr] Checking zerocopy v0.7.35 [INFO] [stderr] Checking wide v0.7.28 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking ppv-lite86 v0.2.20 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Compiling memoffset v0.9.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling portable-atomic v1.7.0 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking smallvec v1.13.2 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling pyo3-macros-backend v0.21.2 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking simba v0.8.1 [INFO] [stderr] Checking unicode-normalization v0.1.24 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling nalgebra-macros v0.2.2 [INFO] [stderr] Checking num-rational v0.4.2 [INFO] [stderr] Compiling libparasail-sys v0.1.6 [INFO] [stderr] Compiling hts-sys v2.1.4 [INFO] [stderr] Compiling pyo3 v0.21.2 [INFO] [stderr] Checking hashbrown v0.14.5 [INFO] [stderr] Compiling anyhow v1.0.89 [INFO] [stderr] Checking equivalent v1.0.1 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Checking idna v0.5.0 [INFO] [stderr] Checking indexmap v2.5.0 [INFO] [stderr] Checking parking_lot v0.12.3 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Checking csv-core v0.1.11 [INFO] [stderr] Compiling pyo3-macros v0.21.2 [INFO] [stderr] Checking ryu v1.0.18 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking unindent v0.2.3 [INFO] [stderr] Compiling indoc v2.0.5 [INFO] [stderr] Checking itoa v1.0.11 [INFO] [stderr] Checking bit-vec v0.8.0 [INFO] [stderr] Checking fixedbitset v0.4.2 [INFO] [stderr] Checking petgraph v0.6.5 [INFO] [stderr] Checking bit-set v0.8.0 [INFO] [stderr] Checking csv v1.3.0 [INFO] [stderr] Checking itertools v0.13.0 [INFO] [stderr] Checking nalgebra v0.32.6 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Checking enum-map v2.7.3 [INFO] [stderr] Checking url v2.5.2 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking multimap v0.10.0 [INFO] [stderr] Checking ndarray v0.16.1 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking ordered-float v4.2.2 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking strum v0.26.3 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Checking bytecount v0.6.8 [INFO] [stderr] Checking strsim v0.11.1 [INFO] [stderr] Checking numpy v0.21.0 [INFO] [stderr] Checking statrs v0.17.1 [INFO] [stderr] Checking bio v2.0.3 [INFO] [stderr] Checking rust-htslib v0.47.0 [INFO] [stderr] Checking parasail-rs v0.7.4 [INFO] [stderr] Checking strkit_rust_ext v0.14.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 5m 49s [INFO] running `Command { std: "docker" "inspect" "f0e0f0eae41e98c9645a1c85ab1fb52007ebb740514573a8e8190b0064ebcd21", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f0e0f0eae41e98c9645a1c85ab1fb52007ebb740514573a8e8190b0064ebcd21", kill_on_drop: false }` [INFO] [stdout] f0e0f0eae41e98c9645a1c85ab1fb52007ebb740514573a8e8190b0064ebcd21