[INFO] cloning repository https://github.com/ARU-life-sciences/hmm_tblout [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/ARU-life-sciences/hmm_tblout" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FARU-life-sciences%2Fhmm_tblout", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FARU-life-sciences%2Fhmm_tblout'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 85b9ca67067878e63880fdaf94f30c0b0686e88b [INFO] testing ARU-life-sciences/hmm_tblout/85b9ca67067878e63880fdaf94f30c0b0686e88b against try#024495a232636f1f9407d7695b2be51edc2c51bd for pr-130285 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FARU-life-sciences%2Fhmm_tblout" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/ARU-life-sciences/hmm_tblout on toolchain 024495a232636f1f9407d7695b2be51edc2c51bd [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+024495a232636f1f9407d7695b2be51edc2c51bd" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/ARU-life-sciences/hmm_tblout [INFO] finished tweaking git repo https://github.com/ARU-life-sciences/hmm_tblout [INFO] tweaked toml for git repo https://github.com/ARU-life-sciences/hmm_tblout written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/ARU-life-sciences/hmm_tblout already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+024495a232636f1f9407d7695b2be51edc2c51bd" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:96c0aa5895ecf336b730ef27bcdde6e21027415df19888aad3cf1448e5d65d90" "/opt/rustwide/cargo-home/bin/cargo" "+024495a232636f1f9407d7695b2be51edc2c51bd" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 48f74794654f85b5ba543c8dcc53885027c4c4c6e63b32da9a820b946cc3249f [INFO] running `Command { std: "docker" "start" "-a" "48f74794654f85b5ba543c8dcc53885027c4c4c6e63b32da9a820b946cc3249f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "48f74794654f85b5ba543c8dcc53885027c4c4c6e63b32da9a820b946cc3249f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "48f74794654f85b5ba543c8dcc53885027c4c4c6e63b32da9a820b946cc3249f", kill_on_drop: false }` [INFO] [stdout] 48f74794654f85b5ba543c8dcc53885027c4c4c6e63b32da9a820b946cc3249f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:96c0aa5895ecf336b730ef27bcdde6e21027415df19888aad3cf1448e5d65d90" "/opt/rustwide/cargo-home/bin/cargo" "+024495a232636f1f9407d7695b2be51edc2c51bd" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] afcd815d3cf81d314fb1b21d1c658464f794080e045c126191761fc3d2514e64 [INFO] running `Command { std: "docker" "start" "-a" "afcd815d3cf81d314fb1b21d1c658464f794080e045c126191761fc3d2514e64", kill_on_drop: false }` [INFO] [stderr] Compiling hmm_tblout v0.2.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.27s [INFO] running `Command { std: "docker" "inspect" "afcd815d3cf81d314fb1b21d1c658464f794080e045c126191761fc3d2514e64", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "afcd815d3cf81d314fb1b21d1c658464f794080e045c126191761fc3d2514e64", kill_on_drop: false }` [INFO] [stdout] afcd815d3cf81d314fb1b21d1c658464f794080e045c126191761fc3d2514e64 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:96c0aa5895ecf336b730ef27bcdde6e21027415df19888aad3cf1448e5d65d90" "/opt/rustwide/cargo-home/bin/cargo" "+024495a232636f1f9407d7695b2be51edc2c51bd" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f638161e19ad54f62bceb8cc8bbbf1c2d585e9976cf08657ade5fa9e7e61cd8a [INFO] running `Command { std: "docker" "start" "-a" "f638161e19ad54f62bceb8cc8bbbf1c2d585e9976cf08657ade5fa9e7e61cd8a", kill_on_drop: false }` [INFO] [stderr] Compiling hmm_tblout v0.2.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: constant `NHMMSCAN_FILE` is never used [INFO] [stdout] --> src/lib.rs:136:11 [INFO] [stdout] | [INFO] [stdout] 136 | const NHMMSCAN_FILE: &str = "# target name accession query name accession hmmfrom hmm to alifrom ali to envfrom ... [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `HMMSCAN_FILE` is never used [INFO] [stdout] --> src/lib.rs:157:11 [INFO] [stdout] | [INFO] [stdout] 157 | const HMMSCAN_FILE: &str = "# --- full sequence ---- --- best 1 domain ... [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `HMMSEARCH_FILE` is never used [INFO] [stdout] --> src/lib.rs:185:11 [INFO] [stdout] | [INFO] [stdout] 185 | const HMMSEARCH_FILE: &str = "# --- full sequence ---- --- best 1 domai... [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.48s [INFO] running `Command { std: "docker" "inspect" "f638161e19ad54f62bceb8cc8bbbf1c2d585e9976cf08657ade5fa9e7e61cd8a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f638161e19ad54f62bceb8cc8bbbf1c2d585e9976cf08657ade5fa9e7e61cd8a", kill_on_drop: false }` [INFO] [stdout] f638161e19ad54f62bceb8cc8bbbf1c2d585e9976cf08657ade5fa9e7e61cd8a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:96c0aa5895ecf336b730ef27bcdde6e21027415df19888aad3cf1448e5d65d90" "/opt/rustwide/cargo-home/bin/cargo" "+024495a232636f1f9407d7695b2be51edc2c51bd" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] f5426220b6e8cce05c3a055ba5ac0212fc57e3a2232aae3eca4afb2b022d82df [INFO] running `Command { std: "docker" "start" "-a" "f5426220b6e8cce05c3a055ba5ac0212fc57e3a2232aae3eca4afb2b022d82df", kill_on_drop: false }` [INFO] [stderr] warning: constant `NHMMSCAN_FILE` is never used [INFO] [stderr] --> src/lib.rs:136:11 [INFO] [stderr] | [INFO] [stderr] 136 | const NHMMSCAN_FILE: &str = "# target name accession query name accession hmmfrom hmm to alifrom ali to envfrom ... [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: constant `HMMSCAN_FILE` is never used [INFO] [stderr] --> src/lib.rs:157:11 [INFO] [stderr] | [INFO] [stderr] 157 | const HMMSCAN_FILE: &str = "# --- full sequence ---- --- best 1 domain ... [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: constant `HMMSEARCH_FILE` is never used [INFO] [stderr] --> src/lib.rs:185:11 [INFO] [stderr] | [INFO] [stderr] 185 | const HMMSEARCH_FILE: &str = "# --- full sequence ---- --- best 1 domai... [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `hmm_tblout` (lib test) generated 3 warnings [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.01s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/hmm_tblout-cdde539c44ddd996) [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test tests::test_phmmer_records ... ok [INFO] [stdout] test tests::test_whole_file ... ok [INFO] [stdout] test tests::test_jackhmmer_meta ... ok [INFO] [stdout] test tests::test_meta ... ok [INFO] [stdout] test tests::test_jackhmmer_records ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests hmm_tblout [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test src/lib.rs - (line 7) - compile ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "f5426220b6e8cce05c3a055ba5ac0212fc57e3a2232aae3eca4afb2b022d82df", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f5426220b6e8cce05c3a055ba5ac0212fc57e3a2232aae3eca4afb2b022d82df", kill_on_drop: false }` [INFO] [stdout] f5426220b6e8cce05c3a055ba5ac0212fc57e3a2232aae3eca4afb2b022d82df