[INFO] fetching crate bamlift 0.3.0... [INFO] checking bamlift-0.3.0 against master#38352b01ae4af9300be03b805d6db68c45e51068 for pr-129864 [INFO] extracting crate bamlift 0.3.0 into /workspace/builds/worker-5-tc1/source [INFO] validating manifest of crates.io crate bamlift 0.3.0 on toolchain 38352b01ae4af9300be03b805d6db68c45e51068 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+38352b01ae4af9300be03b805d6db68c45e51068" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate bamlift 0.3.0 [INFO] finished tweaking crates.io crate bamlift 0.3.0 [INFO] tweaked toml for crates.io crate bamlift 0.3.0 written to /workspace/builds/worker-5-tc1/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+38352b01ae4af9300be03b805d6db68c45e51068" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 75 packages to latest compatible versions [INFO] [stderr] Adding derive-new v0.5.9 (available: v0.7.0) [INFO] [stderr] Adding derive-new v0.6.0 (available: v0.7.0) [INFO] [stderr] Adding env_logger v0.9.3 (available: v0.11.5) [INFO] [stderr] Adding hermit-abi v0.1.19 (available: v0.4.0) [INFO] [stderr] Adding idna v0.5.0 (available: v1.0.2) [INFO] [stderr] Adding itertools v0.10.5 (available: v0.13.0) [INFO] [stderr] Adding quick-error v1.2.3 (available: v2.0.1) [INFO] [stderr] Adding rust-htslib v0.44.1 (available: v0.47.0) [INFO] [stderr] Adding rustc_version v0.1.7 (available: v0.4.1) [INFO] [stderr] Adding semver v0.1.20 (available: v1.0.23) [INFO] [stderr] Adding syn v1.0.109 (available: v2.0.77) [INFO] [stderr] Adding windows-sys v0.52.0 (available: v0.59.0) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+38352b01ae4af9300be03b805d6db68c45e51068" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded derive-new v0.5.9 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded rust-htslib v0.44.1 [INFO] [stderr] Downloaded hts-sys v2.1.4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ceb6ea022f8a89cebbe621bb4987e73a935bd40dfbb726f832cfff4742a5b95a" "/opt/rustwide/cargo-home/bin/cargo" "+38352b01ae4af9300be03b805d6db68c45e51068" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3df21133ce4b879a0a2286a46560b809d7e7afadaf834be23e382fea64f9f787 [INFO] running `Command { std: "docker" "start" "-a" "3df21133ce4b879a0a2286a46560b809d7e7afadaf834be23e382fea64f9f787", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3df21133ce4b879a0a2286a46560b809d7e7afadaf834be23e382fea64f9f787", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3df21133ce4b879a0a2286a46560b809d7e7afadaf834be23e382fea64f9f787", kill_on_drop: false }` [INFO] [stdout] 3df21133ce4b879a0a2286a46560b809d7e7afadaf834be23e382fea64f9f787 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:ceb6ea022f8a89cebbe621bb4987e73a935bd40dfbb726f832cfff4742a5b95a" "/opt/rustwide/cargo-home/bin/cargo" "+38352b01ae4af9300be03b805d6db68c45e51068" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1fa034d6d1b12354785280f3936b7deb9cddf990bb2573b6bf1359f84b075738 [INFO] running `Command { std: "docker" "start" "-a" "1fa034d6d1b12354785280f3936b7deb9cddf990bb2573b6bf1359f84b075738", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.159 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling rustversion v1.0.17 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking regex v1.10.6 [INFO] [stderr] Checking termcolor v1.4.1 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Compiling syn v2.0.77 [INFO] [stderr] Checking itertools v0.10.5 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking env_logger v0.9.3 [INFO] [stderr] Compiling jobserver v0.1.32 [INFO] [stderr] Compiling cc v1.1.21 [INFO] [stderr] Compiling openssl-src v300.3.2+3.3.2 [INFO] [stderr] Compiling cmake v0.1.51 [INFO] [stderr] Compiling openssl-sys v0.9.103 [INFO] [stderr] Compiling curl-sys v0.4.76+curl-8.10.1 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling hts-sys v2.1.4 [INFO] [stderr] Compiling libz-sys v1.1.20 [INFO] [stderr] Compiling thiserror-impl v1.0.64 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Checking thiserror v1.0.64 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Checking rust-htslib v0.44.1 [INFO] [stderr] Checking bamlift v0.3.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 08s [INFO] running `Command { std: "docker" "inspect" "1fa034d6d1b12354785280f3936b7deb9cddf990bb2573b6bf1359f84b075738", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1fa034d6d1b12354785280f3936b7deb9cddf990bb2573b6bf1359f84b075738", kill_on_drop: false }` [INFO] [stdout] 1fa034d6d1b12354785280f3936b7deb9cddf990bb2573b6bf1359f84b075738