[INFO] fetching crate deepbiop-bam 0.1.11...
[INFO] checking deepbiop-bam-0.1.11 against master#ab869e094a907cc5d19b4080f22eccaf347f1f95 for pr-129604
[INFO] extracting crate deepbiop-bam 0.1.11 into /workspace/builds/worker-2-tc1/source
[INFO] validating manifest of crates.io crate deepbiop-bam 0.1.11 on toolchain ab869e094a907cc5d19b4080f22eccaf347f1f95
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate deepbiop-bam 0.1.11
[INFO] finished tweaking crates.io crate deepbiop-bam 0.1.11
[INFO] tweaked toml for crates.io crate deepbiop-bam 0.1.11 written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]      Locking 291 packages to latest compatible versions
[INFO] [stderr]       Adding bit-vec v0.7.0 (latest: v0.8.0)
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[INFO] [stderr]       Adding heck v0.4.1 (latest: v0.5.0)
[INFO] [stderr]       Adding hermit-abi v0.3.9 (latest: v0.4.0)
[INFO] [stderr]       Adding integer-encoding v3.0.4 (latest: v4.0.2)
[INFO] [stderr]       Adding linux-raw-sys v0.4.14 (latest: v0.6.5)
[INFO] [stderr]       Adding nalgebra v0.32.6 (latest: v0.33.0)
[INFO] [stderr]       Adding ndarray v0.15.6 (latest: v0.16.1)
[INFO] [stderr]       Adding ordered-float v2.10.1 (latest: v4.2.2)
[INFO] [stderr]       Adding pyo3 v0.21.2 (latest: v0.22.2)
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[INFO] [stderr]       Adding raw-cpuid v10.7.0 (latest: v11.1.0)
[INFO] [stderr]       Adding rustc-hash v1.1.0 (latest: v2.0.0)
[INFO] [stderr]       Adding rustc_version v0.1.7 (latest: v0.4.1)
[INFO] [stderr]       Adding semver v0.1.20 (latest: v1.0.23)
[INFO] [stderr]       Adding simba v0.8.1 (latest: v0.9.0)
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[INFO] [stderr]       Adding windows-core v0.52.0 (latest: v0.58.0)
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[INFO] [stderr]       Adding windows-targets v0.48.5 (latest: v0.52.6)
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[INFO] [stderr]       Adding windows_x86_64_gnu v0.48.5 (latest: v0.52.6)
[INFO] [stderr]       Adding windows_x86_64_gnullvm v0.48.5 (latest: v0.52.6)
[INFO] [stderr]       Adding windows_x86_64_msvc v0.48.5 (latest: v0.52.6)
[INFO] [stderr]       Adding zip v1.1.4 (latest: v2.2.0)
[INFO] [stderr]       Adding zstd-sys v2.0.12+zstd.1.5.6 (latest: v2.0.13+zstd.1.5.6)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.21.2
[INFO] [stderr]   Downloaded pyo3-macros v0.21.2
[INFO] [stderr]   Downloaded nalgebra-macros v0.2.2
[INFO] [stderr]   Downloaded derive_builder_macro v0.20.1
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[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded bit-vec v0.8.0
[INFO] [stderr]   Downloaded deepbiop-utils v0.1.11
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded needletail v0.5.1
[INFO] [stderr]   Downloaded noodles-bam v0.66.0
[INFO] [stderr]   Downloaded thrift v0.17.0
[INFO] [stderr]   Downloaded noodles-sam v0.63.0
[INFO] [stderr]   Downloaded statrs v0.17.1
[INFO] [stderr]   Downloaded bit-vec v0.7.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.32.0
[INFO] [stderr]   Downloaded bio v2.0.1
[INFO] [stderr]   Downloaded noodles-csi v0.37.0
[INFO] [stderr]   Downloaded pyo3-ffi v0.21.2
[INFO] [stderr]   Downloaded buffer-redux v1.0.2
[INFO] [stderr]   Downloaded derive_builder_core v0.20.1
[INFO] [stderr]   Downloaded derive_builder v0.20.1
[INFO] [stderr]   Downloaded lexical v6.1.1
[INFO] [stderr]   Downloaded noodles v0.79.0
[INFO] [stderr]   Downloaded numpy v0.21.0
[INFO] [stderr]   Downloaded deepbiop-fq v0.1.11
[INFO] [stderr]   Downloaded pyo3-build-config v0.21.2
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded noodles-fasta v0.42.0
[INFO] [stderr]   Downloaded noodles-fastq v0.14.0
[INFO] [stderr]   Downloaded pyo3 v0.21.2
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[INFO] [stderr]   Downloaded libz-ng-sys v1.1.16
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[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded integer-encoding v3.0.4
[INFO] [stderr]   Downloaded smawk v0.3.2
[INFO] [stderr]   Downloaded noodles-core v0.15.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f2993195d0391a5ec77b485392de5605e91c4f4d7a0bdc47568f9ad820abc573
[INFO] running `Command { std: "docker" "start" "-a" "f2993195d0391a5ec77b485392de5605e91c4f4d7a0bdc47568f9ad820abc573", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f2993195d0391a5ec77b485392de5605e91c4f4d7a0bdc47568f9ad820abc573", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f2993195d0391a5ec77b485392de5605e91c4f4d7a0bdc47568f9ad820abc573", kill_on_drop: false }`
[INFO] [stdout] f2993195d0391a5ec77b485392de5605e91c4f4d7a0bdc47568f9ad820abc573
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c22ec5e010e1c37904ba9914277699ce8e8ba7461de01798d8c5deb246f19eae
[INFO] running `Command { std: "docker" "start" "-a" "c22ec5e010e1c37904ba9914277699ce8e8ba7461de01798d8c5deb246f19eae", kill_on_drop: false }`
[INFO] [stderr]     Checking once_cell v1.19.0
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[INFO] [stderr]    Compiling libc v0.2.158
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[INFO] [stderr]     Checking deepbiop-bam v0.1.11 (/opt/rustwide/workdir)
[INFO] [stderr]     Checking statrs v0.17.1
[INFO] [stderr]     Checking bio v2.0.1
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 13s
[INFO] running `Command { std: "docker" "inspect" "c22ec5e010e1c37904ba9914277699ce8e8ba7461de01798d8c5deb246f19eae", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c22ec5e010e1c37904ba9914277699ce8e8ba7461de01798d8c5deb246f19eae", kill_on_drop: false }`
[INFO] [stdout] c22ec5e010e1c37904ba9914277699ce8e8ba7461de01798d8c5deb246f19eae