[INFO] fetching crate debruijn 0.3.4... [INFO] checking debruijn-0.3.4 against master#ab869e094a907cc5d19b4080f22eccaf347f1f95 for pr-129604 [INFO] extracting crate debruijn 0.3.4 into /workspace/builds/worker-4-tc1/source [INFO] validating manifest of crates.io crate debruijn 0.3.4 on toolchain ab869e094a907cc5d19b4080f22eccaf347f1f95 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate debruijn 0.3.4 [INFO] finished tweaking crates.io crate debruijn 0.3.4 [INFO] tweaked toml for crates.io crate debruijn 0.3.4 written to /workspace/builds/worker-4-tc1/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Locking 40 packages to latest compatible versions [INFO] [stderr] Adding ansi_term v0.11.0 (latest: v0.12.1) [INFO] [stderr] Adding bit-set v0.5.3 (latest: v0.8.0) [INFO] [stderr] Adding bit-vec v0.6.3 (latest: v0.8.0) [INFO] [stderr] Adding bitflags v1.3.2 (latest: v2.6.0) [INFO] [stderr] Adding boomphf v0.5.9 (latest: v0.6.0) [INFO] [stderr] Adding cloudabi v0.0.3 (latest: v0.1.0) [INFO] [stderr] Adding pretty_assertions v0.5.1 (latest: v1.4.0) [INFO] [stderr] Adding rand v0.5.6 (latest: v0.8.5) [INFO] [stderr] Adding rand_core v0.3.1 (latest: v0.6.4) [INFO] [stderr] Adding rand_core v0.4.2 (latest: v0.6.4) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded pretty_assertions v0.5.1 [INFO] [stderr] Downloaded wyhash v0.5.0 [INFO] [stderr] Downloaded boomphf v0.5.9 [INFO] [stderr] Downloaded rand v0.5.6 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] e59913672a77412c0acf1edb09ee7dbe67b3b3a44cdfc4ba41acc4ec9cb4f50f [INFO] running `Command { std: "docker" "start" "-a" "e59913672a77412c0acf1edb09ee7dbe67b3b3a44cdfc4ba41acc4ec9cb4f50f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e59913672a77412c0acf1edb09ee7dbe67b3b3a44cdfc4ba41acc4ec9cb4f50f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e59913672a77412c0acf1edb09ee7dbe67b3b3a44cdfc4ba41acc4ec9cb4f50f", kill_on_drop: false }` [INFO] [stdout] e59913672a77412c0acf1edb09ee7dbe67b3b3a44cdfc4ba41acc4ec9cb4f50f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 8c85a7b305c10e33be5fc2b09284b4044d0043088f4ed6a756ecc69136431d31 [INFO] running `Command { std: "docker" "start" "-a" "8c85a7b305c10e33be5fc2b09284b4044d0043088f4ed6a756ecc69136431d31", kill_on_drop: false }` [INFO] [stderr] Compiling crossbeam-utils v0.8.20 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking rand_core v0.4.2 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking difference v2.0.0 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Checking serde v1.0.209 [INFO] [stderr] Checking wyhash v0.5.0 [INFO] [stderr] Checking rand_core v0.3.1 [INFO] [stderr] Checking pretty_assertions v0.5.1 [INFO] [stderr] Checking rand v0.5.6 [INFO] [stderr] Checking bit-set v0.5.3 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Checking crossbeam-deque v0.8.5 [INFO] [stderr] Checking rayon-core v1.12.1 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Checking serde_json v1.0.127 [INFO] [stderr] Checking boomphf v0.5.9 [INFO] [stderr] Checking debruijn v0.3.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stdout] --> src/msp.rs:394:33 [INFO] [stdout] | [INFO] [stdout] 394 | let slices = super::simple_scan::<_, Kmer8>(k, &DnaSlice(&dna), &permutation, true); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stdout] --> src/msp.rs:586:25 [INFO] [stdout] | [INFO] [stdout] 586 | let s1 = super::simple_scan::<_, Kmer5>(35, &DnaSlice(&mut &v1), &permutation, true); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stdout] --> src/msp.rs:587:25 [INFO] [stdout] | [INFO] [stdout] 587 | let s2 = super::simple_scan::<_, Kmer5>(35, &DnaSlice(&mut &v2), &permutation, true); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated method `itertools::Itertools::group_by`: Use .chunk_by() instead [INFO] [stdout] --> src/filter.rs:214:64 [INFO] [stdout] | [INFO] [stdout] 214 | for (kmer, kmer_obs_iter) in &kmer_vec.into_iter().group_by(|elt| elt.0) { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated method `itertools::Itertools::group_by`: Use .chunk_by() instead [INFO] [stdout] --> src/filter.rs:214:64 [INFO] [stdout] | [INFO] [stdout] 214 | for (kmer, kmer_obs_iter) in &kmer_vec.into_iter().group_by(|elt| elt.0) { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `2` is never read [INFO] [stdout] --> src/compression.rs:19:20 [INFO] [stdout] | [INFO] [stdout] 19 | Unique(K, Dir, Exts), [INFO] [stdout] | ------ ^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `ExtMode` has a derived impl for the trait `Clone`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 19 | Unique(K, Dir, ()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `2` is never read [INFO] [stdout] --> src/compression.rs:25:24 [INFO] [stdout] | [INFO] [stdout] 25 | Unique(usize, Dir, Exts), [INFO] [stdout] | ------ ^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `ExtModeNode` has a derived impl for the trait `Clone`, but this is intentionally ignored during dead code analysis [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 25 | Unique(usize, Dir, ()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `2` is never read [INFO] [stdout] --> src/compression.rs:19:20 [INFO] [stdout] | [INFO] [stdout] 19 | Unique(K, Dir, Exts), [INFO] [stdout] | ------ ^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `ExtMode` has a derived impl for the trait `Clone`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 19 | Unique(K, Dir, ()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `2` is never read [INFO] [stdout] --> src/compression.rs:25:24 [INFO] [stdout] | [INFO] [stdout] 25 | Unique(usize, Dir, Exts), [INFO] [stdout] | ------ ^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `ExtModeNode` has a derived impl for the trait `Clone`, but this is intentionally ignored during dead code analysis [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 25 | Unique(usize, Dir, ()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 6 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 5.58s [INFO] running `Command { std: "docker" "inspect" "8c85a7b305c10e33be5fc2b09284b4044d0043088f4ed6a756ecc69136431d31", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8c85a7b305c10e33be5fc2b09284b4044d0043088f4ed6a756ecc69136431d31", kill_on_drop: false }` [INFO] [stdout] 8c85a7b305c10e33be5fc2b09284b4044d0043088f4ed6a756ecc69136431d31