[INFO] cloning repository https://github.com/chfi/gfainject
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/chfi/gfainject" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Fgfainject", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Fgfainject'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] e56cba362047e7137352858dfba5f56e944cbf06
[INFO] checking chfi/gfainject/e56cba362047e7137352858dfba5f56e944cbf06 against master#ab869e094a907cc5d19b4080f22eccaf347f1f95 for pr-129604
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Fgfainject" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/chfi/gfainject on toolchain ab869e094a907cc5d19b4080f22eccaf347f1f95
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/chfi/gfainject
[INFO] finished tweaking git repo https://github.com/chfi/gfainject
[INFO] tweaked toml for git repo https://github.com/chfi/gfainject written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/chfi/gfainject already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded noodles-csi v0.11.0
[INFO] [stderr]   Downloaded noodles v0.29.0
[INFO] [stderr]   Downloaded noodles-bam v0.24.0
[INFO] [stderr]   Downloaded btoi v0.4.2
[INFO] [stderr]   Downloaded noodles-bgzf v0.17.0
[INFO] [stderr]   Downloaded noodles-fasta v0.16.0
[INFO] [stderr]   Downloaded noodles-sam v0.21.0
[INFO] [stderr]   Downloaded roaring v0.10.1
[INFO] [stderr]   Downloaded retain_mut v0.1.7
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d20aa2d2eb0fdf2f6412b80e61365d0ac0f0f487fd1bac04caae7448e2c27649
[INFO] running `Command { std: "docker" "start" "-a" "d20aa2d2eb0fdf2f6412b80e61365d0ac0f0f487fd1bac04caae7448e2c27649", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d20aa2d2eb0fdf2f6412b80e61365d0ac0f0f487fd1bac04caae7448e2c27649", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d20aa2d2eb0fdf2f6412b80e61365d0ac0f0f487fd1bac04caae7448e2c27649", kill_on_drop: false }`
[INFO] [stdout] d20aa2d2eb0fdf2f6412b80e61365d0ac0f0f487fd1bac04caae7448e2c27649
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 48de7405288481567e1706b8466c4a53e5fcd5307c5f8eaf2224cb089c82cd9e
[INFO] running `Command { std: "docker" "start" "-a" "48de7405288481567e1706b8466c4a53e5fcd5307c5f8eaf2224cb089c82cd9e", kill_on_drop: false }`
[INFO] [stderr]    Compiling crossbeam-utils v0.8.12
[INFO] [stderr]    Compiling crc32fast v1.3.2
[INFO] [stderr]     Checking byteorder v1.4.3
[INFO] [stderr]     Checking noodles-core v0.9.0
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking rustc-hash v1.1.0
[INFO] [stderr]    Compiling anyhow v1.0.66
[INFO] [stderr]     Checking bytemuck v1.12.3
[INFO] [stderr]     Checking retain_mut v0.1.7
[INFO] [stderr]     Checking lexical-util v0.8.5
[INFO] [stderr]    Compiling indexmap v1.9.1
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]     Checking pico-args v0.5.0
[INFO] [stderr]     Checking roaring v0.10.1
[INFO] [stderr]     Checking flate2 v1.0.24
[INFO] [stderr]     Checking crossbeam-channel v0.5.6
[INFO] [stderr]     Checking lexical-write-integer v0.8.5
[INFO] [stderr]     Checking lexical-parse-integer v0.8.6
[INFO] [stderr]     Checking lexical-parse-float v0.8.5
[INFO] [stderr]     Checking lexical-write-float v0.8.5
[INFO] [stderr]     Checking noodles-bgzf v0.17.0
[INFO] [stderr]     Checking btoi v0.4.2
[INFO] [stderr]     Checking noodles-csi v0.11.0
[INFO] [stderr]     Checking noodles-fasta v0.16.0
[INFO] [stderr]     Checking lexical-core v0.8.5
[INFO] [stderr]     Checking noodles-sam v0.21.0
[INFO] [stderr]     Checking noodles-bam v0.24.0
[INFO] [stderr]     Checking noodles v0.29.0
[INFO] [stderr]     Checking gfainject v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused variable: `args`
[INFO] [stdout]    --> src/main.rs:300:12
[INFO] [stdout]     |
[INFO] [stdout] 300 |     let Ok(args) = parse_args() else {
[INFO] [stdout]     |            ^^^^ help: if this is intentional, prefix it with an underscore: `_args`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `ref_seqs`
[INFO] [stdout]    --> src/main.rs:332:9
[INFO] [stdout]     |
[INFO] [stdout] 332 |     let ref_seqs = bam.read_reference_sequences()?;
[INFO] [stdout]     |         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_ref_seqs`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `path_id` and `pos_range` are never read
[INFO] [stdout]   --> src/main.rs:34:5
[INFO] [stdout]    |
[INFO] [stdout] 33 | struct PathStepRangeIter<'a> {
[INFO] [stdout]    |        ----------------- fields in this struct
[INFO] [stdout] 34 |     path_id: usize,
[INFO] [stdout]    |     ^^^^^^^
[INFO] [stdout] 35 |     pos_range: std::ops::Range<u32>,
[INFO] [stdout]    |     ^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `args`
[INFO] [stdout]    --> src/main.rs:300:12
[INFO] [stdout]     |
[INFO] [stdout] 300 |     let Ok(args) = parse_args() else {
[INFO] [stdout]     |            ^^^^ help: if this is intentional, prefix it with an underscore: `_args`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `ref_seqs`
[INFO] [stdout]    --> src/main.rs:332:9
[INFO] [stdout]     |
[INFO] [stdout] 332 |     let ref_seqs = bam.read_reference_sequences()?;
[INFO] [stdout]     |         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_ref_seqs`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `path_id` and `pos_range` are never read
[INFO] [stdout]   --> src/main.rs:34:5
[INFO] [stdout]    |
[INFO] [stdout] 33 | struct PathStepRangeIter<'a> {
[INFO] [stdout]    |        ----------------- fields in this struct
[INFO] [stdout] 34 |     path_id: usize,
[INFO] [stdout]    |     ^^^^^^^
[INFO] [stdout] 35 |     pos_range: std::ops::Range<u32>,
[INFO] [stdout]    |     ^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 7.03s
[INFO] running `Command { std: "docker" "inspect" "48de7405288481567e1706b8466c4a53e5fcd5307c5f8eaf2224cb089c82cd9e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "48de7405288481567e1706b8466c4a53e5fcd5307c5f8eaf2224cb089c82cd9e", kill_on_drop: false }`
[INFO] [stdout] 48de7405288481567e1706b8466c4a53e5fcd5307c5f8eaf2224cb089c82cd9e