[INFO] cloning repository https://github.com/anuradhawick/kmertools [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/anuradhawick/kmertools" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fanuradhawick%2Fkmertools", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fanuradhawick%2Fkmertools'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 6e0ce8f20dcd413e292c03f83b45c2778309131f [INFO] checking anuradhawick/kmertools/6e0ce8f20dcd413e292c03f83b45c2778309131f against master#ab869e094a907cc5d19b4080f22eccaf347f1f95 for pr-129604 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fanuradhawick%2Fkmertools" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/anuradhawick/kmertools on toolchain ab869e094a907cc5d19b4080f22eccaf347f1f95 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/anuradhawick/kmertools [INFO] finished tweaking git repo https://github.com/anuradhawick/kmertools [INFO] tweaked toml for git repo https://github.com/anuradhawick/kmertools written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/anuradhawick/kmertools already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded pyo3-macros v0.22.2 [INFO] [stderr] Downloaded multimap v0.9.1 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded bio-types v1.0.1 [INFO] [stderr] Downloaded pyo3-ffi v0.22.2 [INFO] [stderr] Downloaded pyo3-macros-backend v0.22.2 [INFO] [stderr] Downloaded pyo3-build-config v0.22.2 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] [stderr] Downloaded pyo3 v0.22.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] dccb5589123147ee79b083b0fbb1723f310cac744d666e3f955ffdaab3ec4825 [INFO] running `Command { std: "docker" "start" "-a" "dccb5589123147ee79b083b0fbb1723f310cac744d666e3f955ffdaab3ec4825", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "dccb5589123147ee79b083b0fbb1723f310cac744d666e3f955ffdaab3ec4825", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "dccb5589123147ee79b083b0fbb1723f310cac744d666e3f955ffdaab3ec4825", kill_on_drop: false }` [INFO] [stdout] dccb5589123147ee79b083b0fbb1723f310cac744d666e3f955ffdaab3ec4825 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 2ee1b3ac68a970ea577deeb944835964b69710020a29ac3b7bf6f72e61e03c03 [INFO] running `Command { std: "docker" "start" "-a" "2ee1b3ac68a970ea577deeb944835964b69710020a29ac3b7bf6f72e61e03c03", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.81 [INFO] [stderr] Compiling autocfg v1.2.0 [INFO] [stderr] Compiling libm v0.2.8 [INFO] [stderr] Compiling serde v1.0.198 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking getrandom v0.2.14 [INFO] [stderr] Checking memchr v2.7.2 [INFO] [stderr] Checking bytemuck v1.15.0 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking ppv-lite86 v0.2.17 [INFO] [stderr] Compiling paste v1.0.14 [INFO] [stderr] Checking safe_arch v0.7.1 [INFO] [stderr] Compiling rustversion v1.0.15 [INFO] [stderr] Compiling typenum v1.17.0 [INFO] [stderr] Compiling num-traits v0.2.18 [INFO] [stderr] Compiling matrixmultiply v0.3.8 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Compiling quote v1.0.36 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking wide v0.7.16 [INFO] [stderr] Compiling syn v2.0.60 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling thiserror v1.0.58 [INFO] [stderr] Checking regex-syntax v0.8.3 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking hashbrown v0.14.3 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking num-complex v0.4.5 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking equivalent v1.0.1 [INFO] [stderr] Compiling portable-atomic v1.6.0 [INFO] [stderr] Checking simba v0.6.0 [INFO] [stderr] Compiling crc32fast v1.4.0 [INFO] [stderr] Checking either v1.11.0 [INFO] [stderr] Compiling heck v0.4.1 [INFO] [stderr] Compiling anyhow v1.0.82 [INFO] [stderr] Checking indexmap v2.2.6 [INFO] [stderr] Checking csv-core v0.1.11 [INFO] [stderr] Checking fixedbitset v0.4.2 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking unicode-width v0.1.12 [INFO] [stderr] Checking itoa v1.0.11 [INFO] [stderr] Checking ryu v1.0.17 [INFO] [stderr] Checking petgraph v0.6.4 [INFO] [stderr] Checking console v0.15.8 [INFO] [stderr] Checking bit-set v0.5.3 [INFO] [stderr] Checking miniz_oxide v0.7.2 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Checking regex-automata v0.4.6 [INFO] [stderr] Checking itertools v0.11.0 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stderr] Checking ordered-float v3.9.2 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Compiling target-lexicon v0.12.16 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking bytecount v0.6.7 [INFO] [stderr] Checking number_prefix v0.4.0 [INFO] [stderr] Checking strum v0.25.0 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Checking indicatif v0.17.8 [INFO] [stderr] Checking flate2 v1.0.28 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling serde_derive v1.0.198 [INFO] [stderr] Compiling thiserror-impl v1.0.58 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Checking crossbeam-deque v0.8.5 [INFO] [stderr] Checking regex v1.10.4 [INFO] [stderr] Checking enum-map v2.7.3 [INFO] [stderr] Checking memmap2 v0.9.4 [INFO] [stderr] Checking kmer v0.1.3 (/opt/rustwide/workdir/kmer) [INFO] [stderr] Compiling once_cell v1.19.0 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Checking utf8parse v0.2.1 [INFO] [stderr] Checking anstyle-parse v0.2.3 [INFO] [stderr] Checking anstyle v1.0.6 [INFO] [stderr] Checking anstyle-query v1.0.2 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Compiling pyo3-build-config v0.22.2 [INFO] [stderr] Checking sdd v0.2.0 [INFO] [stderr] Checking colorchoice v1.0.0 [INFO] [stderr] Checking anstream v0.6.13 [INFO] [stderr] Checking strsim v0.11.1 [INFO] [stderr] Checking clap_lex v0.7.0 [INFO] [stderr] Compiling clap_derive v4.5.4 [INFO] [stderr] Checking clap_builder v4.5.2 [INFO] [stderr] Compiling memoffset v0.9.1 [INFO] [stderr] Checking unindent v0.2.3 [INFO] [stderr] Compiling indoc v2.0.5 [INFO] [stderr] Checking bio-types v1.0.1 [INFO] [stderr] Checking nalgebra v0.29.0 [INFO] [stderr] Compiling pyo3-macros-backend v0.22.2 [INFO] [stderr] Compiling pyo3-ffi v0.22.2 [INFO] [stderr] Compiling pyo3 v0.22.2 [INFO] [stderr] Checking clap v4.5.4 [INFO] [stderr] Checking csv v1.3.0 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking multimap v0.9.1 [INFO] [stderr] Checking scc v2.1.1 [INFO] [stderr] Compiling pyo3-macros v0.22.2 [INFO] [stderr] Checking statrs v0.16.0 [INFO] [stderr] Checking bio v1.6.0 [INFO] [stderr] Checking ktio v0.1.3 (/opt/rustwide/workdir/ktio) [INFO] [stderr] Checking composition v0.1.3 (/opt/rustwide/workdir/composition) [INFO] [stderr] Checking counter v0.1.3 (/opt/rustwide/workdir/counter) [INFO] [stderr] Checking misc v0.1.3 (/opt/rustwide/workdir/misc) [INFO] [stderr] Checking pybindings v0.1.3 (/opt/rustwide/workdir/pybindings) [INFO] [stderr] Checking coverage v0.1.3 (/opt/rustwide/workdir/coverage) [INFO] [stderr] Checking kmertools v0.1.3 (/opt/rustwide/workdir/kmertools) [INFO] [stderr] Checking conda v0.1.3 (/opt/rustwide/workdir/conda) [INFO] [stderr] Checking pip v0.1.3 (/opt/rustwide/workdir/pip) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 09s [INFO] running `Command { std: "docker" "inspect" "2ee1b3ac68a970ea577deeb944835964b69710020a29ac3b7bf6f72e61e03c03", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2ee1b3ac68a970ea577deeb944835964b69710020a29ac3b7bf6f72e61e03c03", kill_on_drop: false }` [INFO] [stdout] 2ee1b3ac68a970ea577deeb944835964b69710020a29ac3b7bf6f72e61e03c03