[INFO] cloning repository https://github.com/DLBPointon/FastaManipulator [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/DLBPointon/FastaManipulator" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDLBPointon%2FFastaManipulator", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDLBPointon%2FFastaManipulator'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 8edce0707cf71a3d83977f320750560c61b29b3f [INFO] checking DLBPointon/FastaManipulator/8edce0707cf71a3d83977f320750560c61b29b3f against master#ab869e094a907cc5d19b4080f22eccaf347f1f95 for pr-129604 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDLBPointon%2FFastaManipulator" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/DLBPointon/FastaManipulator on toolchain ab869e094a907cc5d19b4080f22eccaf347f1f95 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/DLBPointon/FastaManipulator [INFO] finished tweaking git repo https://github.com/DLBPointon/FastaManipulator [INFO] tweaked toml for git repo https://github.com/DLBPointon/FastaManipulator written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/DLBPointon/FastaManipulator already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded winapi-util v0.1.8 [INFO] [stderr] Downloaded serde_yaml v0.9.34+deprecated [INFO] [stderr] Downloaded primitive-types v0.12.2 [INFO] [stderr] Downloaded gstd-codegen v1.4.2 [INFO] [stderr] Downloaded is_terminal_polyfill v1.70.0 [INFO] [stderr] Downloaded enum-iterator v1.5.0 [INFO] [stderr] Downloaded gear-stack-buffer v1.4.2 [INFO] [stderr] Downloaded impl-codec v0.6.0 [INFO] [stderr] Downloaded impl-trait-for-tuples v0.2.2 [INFO] [stderr] Downloaded predicates-core v1.0.8 [INFO] [stderr] Downloaded lexical-core v0.8.5 [INFO] [stderr] Downloaded difflib v0.4.0 [INFO] [stderr] Downloaded blake2 v0.10.6 [INFO] [stderr] Downloaded const_format v0.2.32 [INFO] [stderr] Downloaded colorchoice v1.0.1 [INFO] [stderr] Downloaded doc-comment v0.3.3 [INFO] [stderr] Downloaded predicates v3.1.2 [INFO] [stderr] Downloaded anstream v0.6.14 [INFO] [stderr] Downloaded clap_lex v0.7.1 [INFO] [stderr] Downloaded clap_builder v4.5.9 [INFO] [stderr] Downloaded lexical-parse-float v0.8.5 [INFO] [stderr] Downloaded regex v1.10.5 [INFO] [stderr] Downloaded clap v4.5.9 [INFO] [stderr] Downloaded const_format_proc_macros v0.2.32 [INFO] [stderr] Downloaded syn v2.0.72 [INFO] [stderr] Downloaded libc-print v0.1.23 [INFO] [stderr] Downloaded gear-core-errors v1.4.2 [INFO] [stderr] Downloaded fixed-hash v0.8.0 [INFO] [stderr] Downloaded bstr v1.9.1 [INFO] [stderr] Downloaded noodles-sam v0.62.0 [INFO] [stderr] Downloaded termtree v0.4.1 [INFO] [stderr] Downloaded wait-timeout v0.2.0 [INFO] [stderr] Downloaded anstyle-parse v0.2.4 [INFO] [stderr] Downloaded gmeta v1.4.2 [INFO] [stderr] Downloaded str-buf v3.0.3 [INFO] [stderr] Downloaded galloc v1.4.2 [INFO] [stderr] Downloaded gsys v1.4.2 [INFO] [stderr] Downloaded enum-iterator-derive v1.4.0 [INFO] [stderr] Downloaded gear-ss58 v1.4.2 [INFO] [stderr] Downloaded crunchy v0.2.2 [INFO] [stderr] Downloaded winnow v0.5.40 [INFO] [stderr] Downloaded toml_edit v0.21.1 [INFO] [stderr] Downloaded lexical-write-float v0.8.5 [INFO] [stderr] Downloaded noodles-cram v0.66.0 [INFO] [stderr] Downloaded bytes v1.6.1 [INFO] [stderr] Downloaded uint v0.9.5 [INFO] [stderr] Downloaded gprimitives v1.4.2 [INFO] [stderr] Downloaded bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Downloaded parity-scale-codec-derive v3.6.12 [INFO] [stderr] Downloaded scale-info-derive v2.11.3 [INFO] [stderr] Downloaded bzip2 v0.4.4 [INFO] [stderr] Downloaded md-5 v0.10.6 [INFO] [stderr] Downloaded lexical-write-integer v0.8.5 [INFO] [stderr] Downloaded bit-vec v0.7.0 [INFO] [stderr] Downloaded noodles-bgzf v0.32.0 [INFO] [stderr] Downloaded cc v1.1.6 [INFO] [stderr] Downloaded gear-dlmalloc v0.2.0 [INFO] [stderr] Downloaded convert_case v0.4.0 [INFO] [stderr] Downloaded rustc_version v0.4.0 [INFO] [stderr] Downloaded byte-slice-cast v1.2.2 [INFO] [stderr] Downloaded toml_datetime v0.6.6 [INFO] [stderr] Downloaded io v0.0.2 [INFO] [stderr] Downloaded lexical-util v0.8.5 [INFO] [stderr] Downloaded flate2 v1.0.30 [INFO] [stderr] Downloaded noodles-core v0.15.0 [INFO] [stderr] Downloaded noodles v0.78.0 [INFO] [stderr] Downloaded derive_more v0.99.18 [INFO] [stderr] Downloaded scale-info v2.11.3 [INFO] [stderr] Downloaded noodles-bam v0.65.0 [INFO] [stderr] Downloaded assert_cmd v2.0.16 [INFO] [stderr] Downloaded bs58 v0.5.1 [INFO] [stderr] Downloaded gstd v1.4.2 [INFO] [stderr] Downloaded parity-scale-codec v3.6.12 [INFO] [stderr] Downloaded lexical-parse-integer v0.8.6 [INFO] [stderr] Downloaded noodles-csi v0.37.0 [INFO] [stderr] Downloaded unsafe-libyaml v0.2.11 [INFO] [stderr] Downloaded predicates-tree v1.0.11 [INFO] [stderr] Downloaded anstyle-query v1.1.0 [INFO] [stderr] Downloaded anstyle-wincon v3.0.3 [INFO] [stderr] Downloaded anstyle v1.0.7 [INFO] [stderr] Downloaded compare v0.1.0 [INFO] [stderr] Downloaded unicode-xid v0.2.4 [INFO] [stderr] Downloaded page_size v0.6.0 [INFO] [stderr] Downloaded gcore v1.4.2 [INFO] [stderr] Downloaded rustc-hex v2.1.0 [INFO] [stderr] Downloaded semver v1.0.23 [INFO] [stderr] Downloaded psm v0.1.21 [INFO] [stderr] Downloaded fastrand v2.1.0 [INFO] [stderr] Downloaded proc-macro-crate v3.1.0 [INFO] [stderr] Downloaded subtle v2.6.1 [INFO] [stderr] Downloaded noodles-fasta v0.41.0 [INFO] [stderr] Downloaded stacker v0.1.15 [INFO] [stderr] Downloaded windows-sys v0.59.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f2d2bc1ffc9646b309e651d3f24cb50677a224bf8776a04c2c4f37da6d3cb969 [INFO] running `Command { std: "docker" "start" "-a" "f2d2bc1ffc9646b309e651d3f24cb50677a224bf8776a04c2c4f37da6d3cb969", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f2d2bc1ffc9646b309e651d3f24cb50677a224bf8776a04c2c4f37da6d3cb969", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f2d2bc1ffc9646b309e651d3f24cb50677a224bf8776a04c2c4f37da6d3cb969", kill_on_drop: false }` [INFO] [stdout] f2d2bc1ffc9646b309e651d3f24cb50677a224bf8776a04c2c4f37da6d3cb969 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f10f394fcfb02ce16a320c8127e31b57c7d588bea986a7bb9e2ead7d51254016 [INFO] running `Command { std: "docker" "start" "-a" "f10f394fcfb02ce16a320c8127e31b57c7d588bea986a7bb9e2ead7d51254016", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling version_check v0.9.4 [INFO] [stderr] Compiling unicode-ident v1.0.12 [INFO] [stderr] Compiling typenum v1.17.0 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling equivalent v1.0.1 [INFO] [stderr] Compiling winnow v0.5.40 [INFO] [stderr] Compiling toml_datetime v0.6.6 [INFO] [stderr] Checking static_assertions v1.1.0 [INFO] [stderr] Compiling libc v0.2.155 [INFO] [stderr] Compiling cc v1.1.6 [INFO] [stderr] Checking memchr v2.7.4 [INFO] [stderr] Compiling generic-array v0.14.7 [INFO] [stderr] Checking byteorder v1.5.0 [INFO] [stderr] Compiling convert_case v0.4.0 [INFO] [stderr] Compiling quote v1.0.36 [INFO] [stderr] Compiling indexmap v2.2.6 [INFO] [stderr] Compiling crunchy v0.2.2 [INFO] [stderr] Compiling syn v2.0.72 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Checking once_cell v1.19.0 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Checking regex-syntax v0.8.4 [INFO] [stderr] Checking subtle v2.6.1 [INFO] [stderr] Compiling toml_edit v0.21.1 [INFO] [stderr] Checking zerocopy v0.7.35 [INFO] [stderr] Checking crypto-common v0.1.6 [INFO] [stderr] Checking block-buffer v0.10.4 [INFO] [stderr] Compiling crossbeam-utils v0.8.20 [INFO] [stderr] Checking digest v0.10.7 [INFO] [stderr] Compiling pkg-config v0.3.30 [INFO] [stderr] Checking byte-slice-cast v1.2.2 [INFO] [stderr] Checking allocator-api2 v0.2.18 [INFO] [stderr] Checking arrayvec v0.7.4 [INFO] [stderr] Checking lexical-util v0.8.5 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Checking regex-automata v0.4.7 [INFO] [stderr] Checking miniz_oxide v0.7.4 [INFO] [stderr] Checking crc32fast v1.4.2 [INFO] [stderr] Checking hex v0.4.3 [INFO] [stderr] Compiling proc-macro-crate v3.1.0 [INFO] [stderr] Checking flate2 v1.0.30 [INFO] [stderr] Checking crossbeam-channel v0.5.13 [INFO] [stderr] Checking bytes v1.6.1 [INFO] [stderr] Checking lexical-write-integer v0.8.5 [INFO] [stderr] Checking lexical-parse-integer v0.8.6 [INFO] [stderr] Checking blake2 v0.10.6 [INFO] [stderr] Checking bitflags v2.6.0 [INFO] [stderr] Checking noodles-bgzf v0.32.0 [INFO] [stderr] Compiling rustc-hex v2.1.0 [INFO] [stderr] Compiling uint v0.9.5 [INFO] [stderr] Checking fixed-hash v0.8.0 [INFO] [stderr] Checking lexical-parse-float v0.8.5 [INFO] [stderr] Checking lexical-write-float v0.8.5 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Checking futures-sink v0.3.30 [INFO] [stderr] Compiling gear-stack-buffer v1.4.2 [INFO] [stderr] Compiling bs58 v0.5.1 [INFO] [stderr] Checking futures-core v0.3.30 [INFO] [stderr] Checking bit-vec v0.7.0 [INFO] [stderr] Checking anstyle v1.0.7 [INFO] [stderr] Compiling gear-dlmalloc v0.2.0 [INFO] [stderr] Compiling gear-ss58 v1.4.2 [INFO] [stderr] Checking libc-print v0.1.23 [INFO] [stderr] Checking lexical-core v0.8.5 [INFO] [stderr] Checking page_size v0.6.0 [INFO] [stderr] Checking str-buf v3.0.3 [INFO] [stderr] Checking utf8parse v0.2.2 [INFO] [stderr] Checking futures-task v0.3.30 [INFO] [stderr] Checking pin-utils v0.1.0 [INFO] [stderr] Checking pin-project-lite v0.2.14 [INFO] [stderr] Compiling unicode-xid v0.2.4 [INFO] [stderr] Compiling serde v1.0.204 [INFO] [stderr] Checking futures-util v0.3.30 [INFO] [stderr] Compiling const_format_proc_macros v0.2.32 [INFO] [stderr] Checking bstr v1.9.1 [INFO] [stderr] Checking anstyle-parse v0.2.4 [INFO] [stderr] Checking futures-channel v0.3.30 [INFO] [stderr] Compiling psm v0.1.21 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Checking gsys v1.4.2 [INFO] [stderr] Checking colorchoice v1.0.1 [INFO] [stderr] Checking predicates-core v1.0.8 [INFO] [stderr] Compiling rustix v0.38.34 [INFO] [stderr] Checking noodles-core v0.15.0 [INFO] [stderr] Checking is_terminal_polyfill v1.70.0 [INFO] [stderr] Checking anstyle-query v1.1.0 [INFO] [stderr] Checking futures-io v0.3.30 [INFO] [stderr] Checking anstream v0.6.14 [INFO] [stderr] Checking noodles-csi v0.37.0 [INFO] [stderr] Checking noodles-fasta v0.41.0 [INFO] [stderr] Checking const_format v0.2.32 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Checking xz2 v0.1.7 [INFO] [stderr] Checking galloc v1.4.2 [INFO] [stderr] Checking md-5 v0.10.6 [INFO] [stderr] Compiling stacker v0.1.15 [INFO] [stderr] Checking ryu v1.0.18 [INFO] [stderr] Checking clap_lex v0.7.1 [INFO] [stderr] Checking noodles-sam v0.62.0 [INFO] [stderr] Checking difflib v0.4.0 [INFO] [stderr] Compiling assert_cmd v2.0.16 [INFO] [stderr] Checking termtree v0.4.1 [INFO] [stderr] Checking itoa v1.0.11 [INFO] [stderr] Checking linux-raw-sys v0.4.14 [INFO] [stderr] Checking strsim v0.11.1 [INFO] [stderr] Checking predicates v3.1.2 [INFO] [stderr] Checking predicates-tree v1.0.11 [INFO] [stderr] Checking clap_builder v4.5.9 [INFO] [stderr] Checking wait-timeout v0.2.0 [INFO] [stderr] Checking csv-core v0.1.11 [INFO] [stderr] Compiling derive_more v0.99.18 [INFO] [stderr] Compiling enum-iterator-derive v1.4.0 [INFO] [stderr] Compiling serde_derive v1.0.204 [INFO] [stderr] Checking enum-iterator v1.5.0 [INFO] [stderr] Checking futures v0.3.30 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking fastrand v2.1.0 [INFO] [stderr] Compiling parity-scale-codec-derive v3.6.12 [INFO] [stderr] Compiling impl-trait-for-tuples v0.2.2 [INFO] [stderr] Compiling scale-info-derive v2.11.3 [INFO] [stderr] Checking noodles-bam v0.65.0 [INFO] [stderr] Checking lazy_static v1.5.0 [INFO] [stderr] Checking unsafe-libyaml v0.2.11 [INFO] [stderr] Checking colored v2.1.0 [INFO] [stderr] Checking tempfile v3.12.0 [INFO] [stderr] Checking clap v4.5.9 [INFO] [stderr] Checking noodles-cram v0.66.0 [INFO] [stderr] Checking walkdir v2.5.0 [INFO] [stderr] Checking regex v1.10.5 [INFO] [stderr] Checking compare v0.1.0 [INFO] [stderr] Checking parity-scale-codec v3.6.12 [INFO] [stderr] Compiling scale-info v2.11.3 [INFO] [stderr] Compiling impl-codec v0.6.0 [INFO] [stderr] Compiling primitive-types v0.12.2 [INFO] [stderr] Checking noodles v0.78.0 [INFO] [stderr] Checking gear-core-errors v1.4.2 [INFO] [stderr] Checking gmeta v1.4.2 [INFO] [stderr] Compiling gprimitives v1.4.2 [INFO] [stderr] Checking gcore v1.4.2 [INFO] [stderr] Compiling gstd-codegen v1.4.2 [INFO] [stderr] Checking gstd v1.4.2 [INFO] [stderr] Checking csv v1.3.0 [INFO] [stderr] Checking serde_yaml v0.9.34+deprecated [INFO] [stderr] Checking io v0.0.2 [INFO] [stderr] Checking fasta_manipulation v0.1.5 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused return value of `must_use` that must be used [INFO] [stdout] --> src/yaml_validator.rs:246:21 [INFO] [stdout] | [INFO] [stdout] 246 | format!("PASS: {}", csv_path); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this warning originates in the macro `format` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused return value of `must_use` that must be used [INFO] [stdout] --> src/yaml_validator.rs:246:21 [INFO] [stdout] | [INFO] [stdout] 246 | format!("PASS: {}", csv_path); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this warning originates in the macro `format` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 23s [INFO] running `Command { std: "docker" "inspect" "f10f394fcfb02ce16a320c8127e31b57c7d588bea986a7bb9e2ead7d51254016", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f10f394fcfb02ce16a320c8127e31b57c7d588bea986a7bb9e2ead7d51254016", kill_on_drop: false }` [INFO] [stdout] f10f394fcfb02ce16a320c8127e31b57c7d588bea986a7bb9e2ead7d51254016