[INFO] cloning repository https://github.com/BramDevlaminck/CCB_PairwiseAlignment [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/BramDevlaminck/CCB_PairwiseAlignment" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FBramDevlaminck%2FCCB_PairwiseAlignment", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FBramDevlaminck%2FCCB_PairwiseAlignment'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 420dc9e9f6c63df9967c3bbe8fc1d58217606c54 [INFO] checking BramDevlaminck/CCB_PairwiseAlignment/420dc9e9f6c63df9967c3bbe8fc1d58217606c54 against master#ab869e094a907cc5d19b4080f22eccaf347f1f95 for pr-129604 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FBramDevlaminck%2FCCB_PairwiseAlignment" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/BramDevlaminck/CCB_PairwiseAlignment on toolchain ab869e094a907cc5d19b4080f22eccaf347f1f95 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/BramDevlaminck/CCB_PairwiseAlignment [INFO] finished tweaking git repo https://github.com/BramDevlaminck/CCB_PairwiseAlignment [INFO] tweaked toml for git repo https://github.com/BramDevlaminck/CCB_PairwiseAlignment written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/BramDevlaminck/CCB_PairwiseAlignment already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: profiles for the non root package will be ignored, specify profiles at the workspace root: [INFO] [stderr] package: /workspace/builds/worker-7-tc1/source/bitpal/Cargo.toml [INFO] [stderr] workspace: /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 06ec71d1f2fcb92a5ac56180ca559866e267b15c2b1fd093e642e28a54e98dce [INFO] running `Command { std: "docker" "start" "-a" "06ec71d1f2fcb92a5ac56180ca559866e267b15c2b1fd093e642e28a54e98dce", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "06ec71d1f2fcb92a5ac56180ca559866e267b15c2b1fd093e642e28a54e98dce", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "06ec71d1f2fcb92a5ac56180ca559866e267b15c2b1fd093e642e28a54e98dce", kill_on_drop: false }` [INFO] [stdout] 06ec71d1f2fcb92a5ac56180ca559866e267b15c2b1fd093e642e28a54e98dce [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e0434aada11e0f16e79931357dcde1b417c670caacb674dbc87d26ada4ccb803 [INFO] running `Command { std: "docker" "start" "-a" "e0434aada11e0f16e79931357dcde1b417c670caacb674dbc87d26ada4ccb803", kill_on_drop: false }` [INFO] [stderr] warning: profiles for the non root package will be ignored, specify profiles at the workspace root: [INFO] [stderr] package: /opt/rustwide/workdir/bitpal/Cargo.toml [INFO] [stderr] workspace: /opt/rustwide/workdir/Cargo.toml [INFO] [stderr] Compiling proc-macro2 v1.0.78 [INFO] [stderr] Compiling unicode-ident v1.0.12 [INFO] [stderr] Checking utf8parse v0.2.1 [INFO] [stderr] Checking anstyle-query v1.0.2 [INFO] [stderr] Checking anstyle v1.0.6 [INFO] [stderr] Checking colorchoice v1.0.0 [INFO] [stderr] Checking strsim v0.11.0 [INFO] [stderr] Checking clap_lex v0.7.0 [INFO] [stderr] Compiling heck v0.4.1 [INFO] [stderr] Checking fasta_reader v0.1.0 (/opt/rustwide/workdir/fasta_reader) [INFO] [stderr] Compiling libc v0.2.153 [INFO] [stderr] Compiling zerocopy v0.8.0-alpha.5 [INFO] [stderr] Checking ppv-lite86 v0.2.17 [INFO] [stderr] Checking anstyle-parse v0.2.3 [INFO] [stderr] Checking anstream v0.6.12 [INFO] [stderr] Checking clap_builder v4.5.1 [INFO] [stderr] Compiling quote v1.0.35 [INFO] [stderr] Checking getrandom v0.2.12 [INFO] [stderr] Compiling syn v2.0.50 [INFO] [stderr] Checking rand_core v0.9.0-alpha.0 [INFO] [stderr] Checking rand_chacha v0.9.0-alpha.0 [INFO] [stderr] Checking rand v0.9.0-alpha.0 [INFO] [stderr] Compiling clap_derive v4.5.0 [INFO] [stderr] Checking clap v4.5.1 [INFO] [stderr] Checking needleman_wunsch v0.1.0 (/opt/rustwide/workdir/needleman_wunsch) [INFO] [stderr] Checking banded_global_alignment v0.1.0 (/opt/rustwide/workdir/banded_global_alignment) [INFO] [stderr] Checking needleman_wunsch_delta_encoded v0.1.0 (/opt/rustwide/workdir/needleman_wunsch_delta_encoded) [INFO] [stderr] Checking bitpal v0.1.0 (/opt/rustwide/workdir/bitpal) [INFO] [stderr] Checking hirschberg v0.1.0 (/opt/rustwide/workdir/hirschberg) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 9.62s [INFO] running `Command { std: "docker" "inspect" "e0434aada11e0f16e79931357dcde1b417c670caacb674dbc87d26ada4ccb803", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e0434aada11e0f16e79931357dcde1b417c670caacb674dbc87d26ada4ccb803", kill_on_drop: false }` [INFO] [stdout] e0434aada11e0f16e79931357dcde1b417c670caacb674dbc87d26ada4ccb803