[INFO] cloning repository https://github.com/10XGenomics/vartrix
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/10XGenomics/vartrix" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fvartrix", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fvartrix'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 3dd49885e9c2cdce72b1c0e58e125a5285a184bc
[INFO] checking 10XGenomics/vartrix/3dd49885e9c2cdce72b1c0e58e125a5285a184bc against master#ab869e094a907cc5d19b4080f22eccaf347f1f95 for pr-129604
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fvartrix" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/10XGenomics/vartrix on toolchain ab869e094a907cc5d19b4080f22eccaf347f1f95
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/10XGenomics/vartrix
[INFO] finished tweaking git repo https://github.com/10XGenomics/vartrix
[INFO] tweaked toml for git repo https://github.com/10XGenomics/vartrix written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/10XGenomics/vartrix already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] b921a294066fb3f67a1f26de182bc260da2c468a5f53cb1e7c3aa4aaf2486ee8
[INFO] running `Command { std: "docker" "start" "-a" "b921a294066fb3f67a1f26de182bc260da2c468a5f53cb1e7c3aa4aaf2486ee8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b921a294066fb3f67a1f26de182bc260da2c468a5f53cb1e7c3aa4aaf2486ee8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b921a294066fb3f67a1f26de182bc260da2c468a5f53cb1e7c3aa4aaf2486ee8", kill_on_drop: false }`
[INFO] [stdout] b921a294066fb3f67a1f26de182bc260da2c468a5f53cb1e7c3aa4aaf2486ee8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b2a3be5859f31bda0640fe18b44f6d5f29a5256e051a9661ef26f18983263741
[INFO] running `Command { std: "docker" "start" "-a" "b2a3be5859f31bda0640fe18b44f6d5f29a5256e051a9661ef26f18983263741", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.147
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[INFO] [stderr]    Compiling serde v1.0.171
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling unicode-xid v0.1.0
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[INFO] [stderr]    Compiling openssl-sys v0.9.60
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[INFO] [stderr]    Compiling lzma-sys v0.1.16
[INFO] [stderr]    Compiling curl-sys v0.4.36+curl-7.71.1
[INFO] [stderr]    Compiling bzip2-sys v0.1.9+1.0.8
[INFO] [stderr]     Checking regex v1.3.1
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[INFO] [stderr]    Compiling thiserror-impl v1.0.20
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[INFO] [stderr]    Compiling derefable v0.1.0
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[INFO] [stderr]    Compiling strum_macros v0.16.0
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[INFO] [stderr]     Checking rust-htslib v0.36.0
[INFO] [stderr]     Checking vartrix v1.1.22 (/opt/rustwide/workdir)
[INFO] [stdout] warning: use of deprecated type alias `std::panic::PanicInfo`: use `PanicHookInfo` instead
[INFO] [stdout]    --> src/main.rs:139:5
[INFO] [stdout]     |
[INFO] [stdout] 139 |     setup_panic!(); // pretty panics for users
[INFO] [stdout]     |     ^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(deprecated)]` on by default
[INFO] [stdout]     = note: this warning originates in the macro `$crate::setup_panic` which comes from the expansion of the macro `setup_panic` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated type alias `std::panic::PanicInfo`: use `PanicHookInfo` instead
[INFO] [stdout]    --> src/main.rs:139:5
[INFO] [stdout]     |
[INFO] [stdout] 139 |     setup_panic!(); // pretty panics for users
[INFO] [stdout]     |     ^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this warning originates in the macro `$crate::setup_panic` which comes from the expansion of the macro `setup_panic` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated type alias `std::panic::PanicInfo`: use `PanicHookInfo` instead
[INFO] [stdout]    --> src/main.rs:139:5
[INFO] [stdout]     |
[INFO] [stdout] 139 |     setup_panic!(); // pretty panics for users
[INFO] [stdout]     |     ^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(deprecated)]` on by default
[INFO] [stdout]     = note: this warning originates in the macro `$crate::setup_panic` which comes from the expansion of the macro `setup_panic` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated type alias `std::panic::PanicInfo`: use `PanicHookInfo` instead
[INFO] [stdout]    --> src/main.rs:139:5
[INFO] [stdout]     |
[INFO] [stdout] 139 |     setup_panic!(); // pretty panics for users
[INFO] [stdout]     |     ^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: this warning originates in the macro `$crate::setup_panic` which comes from the expansion of the macro `setup_panic` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 15s
[INFO] running `Command { std: "docker" "inspect" "b2a3be5859f31bda0640fe18b44f6d5f29a5256e051a9661ef26f18983263741", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b2a3be5859f31bda0640fe18b44f6d5f29a5256e051a9661ef26f18983263741", kill_on_drop: false }`
[INFO] [stdout] b2a3be5859f31bda0640fe18b44f6d5f29a5256e051a9661ef26f18983263741