[INFO] cloning repository https://github.com/10XGenomics/rust-pseudoaligner
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/10XGenomics/rust-pseudoaligner" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Frust-pseudoaligner", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Frust-pseudoaligner'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 9d9cab8a1475bc7cd34169822620c77bce0d5930
[INFO] checking 10XGenomics/rust-pseudoaligner/9d9cab8a1475bc7cd34169822620c77bce0d5930 against master#ab869e094a907cc5d19b4080f22eccaf347f1f95 for pr-129604
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Frust-pseudoaligner" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/10XGenomics/rust-pseudoaligner on toolchain ab869e094a907cc5d19b4080f22eccaf347f1f95
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner
[INFO] finished tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner
[INFO] tweaked toml for git repo https://github.com/10XGenomics/rust-pseudoaligner written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/10XGenomics/rust-pseudoaligner already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/10XGenomics/rust-debruijn`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded getset v0.0.9
[INFO] [stderr]   Downloaded boomphf v0.6.0
[INFO] [stderr]   Downloaded wyhash v0.5.0
[INFO] [stderr]   Downloaded docopt v1.1.1
[INFO] [stderr]   Downloaded bio v1.5.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 9a02a952d97eae334519ec0cb81e6d225fb1aeff0dbefe0e40617a1142a82744
[INFO] running `Command { std: "docker" "start" "-a" "9a02a952d97eae334519ec0cb81e6d225fb1aeff0dbefe0e40617a1142a82744", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "9a02a952d97eae334519ec0cb81e6d225fb1aeff0dbefe0e40617a1142a82744", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9a02a952d97eae334519ec0cb81e6d225fb1aeff0dbefe0e40617a1142a82744", kill_on_drop: false }`
[INFO] [stdout] 9a02a952d97eae334519ec0cb81e6d225fb1aeff0dbefe0e40617a1142a82744
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+ab869e094a907cc5d19b4080f22eccaf347f1f95" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] acd3b3f17a5d0399c305b78a9d25eb552861ca2bfe16661a571ce9c828b117ab
[INFO] running `Command { std: "docker" "start" "-a" "acd3b3f17a5d0399c305b78a9d25eb552861ca2bfe16661a571ce9c828b117ab", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.39
[INFO] [stderr]    Compiling unicode-ident v1.0.0
[INFO] [stderr]    Compiling syn v1.0.96
[INFO] [stderr]    Compiling libc v0.2.152
[INFO] [stderr]    Compiling libm v0.2.2
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling serde_derive v1.0.147
[INFO] [stderr]    Compiling serde v1.0.147
[INFO] [stderr]     Checking memchr v2.7.1
[INFO] [stderr]    Compiling memoffset v0.6.5
[INFO] [stderr]     Checking regex-syntax v0.8.2
[INFO] [stderr]    Compiling rustix v0.38.31
[INFO] [stderr]    Compiling crossbeam-utils v0.8.19
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.8
[INFO] [stderr]     Checking linux-raw-sys v0.4.13
[INFO] [stderr]     Checking bitflags v2.4.2
[INFO] [stderr]     Checking ppv-lite86 v0.2.16
[INFO] [stderr]     Checking aho-corasick v1.1.2
[INFO] [stderr]    Compiling quote v1.0.18
[INFO] [stderr]     Checking getrandom v0.2.6
[INFO] [stderr]     Checking bytemuck v1.14.0
[INFO] [stderr]     Checking rand_core v0.6.3
[INFO] [stderr]     Checking safe_arch v0.7.1
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[INFO] [stderr]    Compiling num-rational v0.4.0
[INFO] [stderr]     Checking num-complex v0.4.1
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking either v1.6.1
[INFO] [stderr]     Checking regex-automata v0.4.5
[INFO] [stderr]    Compiling rustversion v1.0.6
[INFO] [stderr]    Compiling typenum v1.15.0
[INFO] [stderr]     Checking matrixmultiply v0.3.2
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking wide v0.7.13
[INFO] [stderr]     Checking crossbeam-deque v0.8.1
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[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking ryu v1.0.10
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling paste v1.0.7
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking bit-set v0.5.2
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking rayon-core v1.12.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling serde_json v1.0.99
[INFO] [stderr]     Checking smallvec v1.10.0
[INFO] [stderr]    Compiling anyhow v1.0.79
[INFO] [stderr]    Compiling crc32fast v1.3.2
[INFO] [stderr]     Checking indexmap v2.2.2
[INFO] [stderr]     Checking is-terminal v0.4.10
[INFO] [stderr]     Checking rayon v1.8.1
[INFO] [stderr]     Checking itertools v0.11.0
[INFO] [stderr]     Checking wyhash v0.5.0
[INFO] [stderr]     Checking csv-core v0.1.11
[INFO] [stderr]     Checking termcolor v1.1.3
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]     Checking regex v1.10.3
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking miniz_oxide v0.7.1
[INFO] [stderr]     Checking petgraph v0.6.4
[INFO] [stderr]     Checking env_logger v0.10.2
[INFO] [stderr]     Checking lock_api v0.4.11
[INFO] [stderr]     Checking parking_lot_core v0.9.9
[INFO] [stderr]     Checking ndarray v0.15.4
[INFO] [stderr]     Checking ordered-float v3.7.0
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking bytecount v0.6.3
[INFO] [stderr]     Checking strum v0.23.0
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking tempfile v3.10.0
[INFO] [stderr]     Checking dashmap v5.5.3
[INFO] [stderr]     Checking flate2 v1.0.28
[INFO] [stderr]     Checking pretty_env_logger v0.5.0
[INFO] [stderr]     Checking wait-timeout v0.2.0
[INFO] [stderr]     Checking quick-error v1.2.3
[INFO] [stderr]     Checking rand_xorshift v0.3.0
[INFO] [stderr]     Checking rusty-fork v0.3.0
[INFO] [stderr]     Checking unarray v0.1.4
[INFO] [stderr]     Checking proptest v1.4.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.31
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling enum-map-derive v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.23.1
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]     Checking enum-map v1.1.1
[INFO] [stderr]    Compiling getset v0.0.9
[INFO] [stderr]     Checking thiserror v1.0.31
[INFO] [stderr]     Checking bio-types v1.0.1
[INFO] [stderr]     Checking nalgebra v0.29.0
[INFO] [stderr]     Checking boomphf v0.6.0
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking csv v1.3.0
[INFO] [stderr]     Checking multimap v0.8.3
[INFO] [stderr]     Checking docopt v1.1.1
[INFO] [stderr]     Checking bincode v1.3.3
[INFO] [stderr]     Checking debruijn v0.3.4 (https://github.com/10XGenomics/rust-debruijn#8d9a5c52)
[INFO] [stderr]     Checking statrs v0.16.0
[INFO] [stderr]     Checking bio v1.5.0
[INFO] [stderr]     Checking debruijn_mapping v0.6.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 16s
[INFO] running `Command { std: "docker" "inspect" "acd3b3f17a5d0399c305b78a9d25eb552861ca2bfe16661a571ce9c828b117ab", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "acd3b3f17a5d0399c305b78a9d25eb552861ca2bfe16661a571ce9c828b117ab", kill_on_drop: false }`
[INFO] [stdout] acd3b3f17a5d0399c305b78a9d25eb552861ca2bfe16661a571ce9c828b117ab