[INFO] fetching crate exon-fasta 0.31.0... [INFO] checking exon-fasta-0.31.0 against master#5ad98b4026d5172f27615b105658bc8bfd677be8 for pr-129422 [INFO] extracting crate exon-fasta 0.31.0 into /workspace/builds/worker-2-tc1/source [INFO] validating manifest of crates.io crate exon-fasta 0.31.0 on toolchain 5ad98b4026d5172f27615b105658bc8bfd677be8 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5ad98b4026d5172f27615b105658bc8bfd677be8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate exon-fasta 0.31.0 [INFO] finished tweaking crates.io crate exon-fasta 0.31.0 [INFO] tweaked toml for crates.io crate exon-fasta 0.31.0 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5ad98b4026d5172f27615b105658bc8bfd677be8" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Locking 266 packages to latest compatible versions [INFO] [stderr] Adding addr2line v0.22.0 (latest: v0.24.1) [INFO] [stderr] Adding bit-vec v0.7.0 (latest: v0.8.0) [INFO] [stderr] Adding bitflags v1.3.2 (latest: v2.6.0) [INFO] [stderr] Adding fixedbitset v0.4.2 (latest: v0.5.7) [INFO] [stderr] Adding generic-array v0.14.7 (latest: v1.1.0) [INFO] [stderr] Adding gimli v0.29.0 (latest: v0.31.0) [INFO] [stderr] Adding heck v0.4.1 (latest: v0.5.0) [INFO] [stderr] Adding hermit-abi v0.3.9 (latest: v0.4.0) [INFO] [stderr] Adding idna v0.5.0 (latest: v1.0.2) [INFO] [stderr] Adding integer-encoding v3.0.4 (latest: v4.0.2) [INFO] [stderr] Adding itertools v0.12.1 (latest: v0.13.0) [INFO] [stderr] Adding linux-raw-sys v0.4.14 (latest: v0.6.5) [INFO] [stderr] Adding miniz_oxide v0.7.4 (latest: v0.8.0) [INFO] [stderr] Adding object_store v0.10.2 (latest: v0.11.0) [INFO] [stderr] Adding ordered-float v2.10.1 (latest: v4.2.2) [INFO] [stderr] Adding siphasher v0.3.11 (latest: v1.0.1) [INFO] [stderr] Adding snafu v0.7.5 (latest: v0.8.4) [INFO] [stderr] Adding snafu-derive v0.7.5 (latest: v0.8.4) [INFO] [stderr] Adding sqlparser v0.49.0 (latest: v0.50.0) [INFO] [stderr] Adding syn v1.0.109 (latest: v2.0.77) [INFO] [stderr] Adding wasi v0.11.0+wasi-snapshot-preview1 (latest: v0.13.2+wasi-0.2.1) [INFO] [stderr] Adding windows-core v0.52.0 (latest: v0.58.0) [INFO] [stderr] Adding windows-sys v0.52.0 (latest: v0.59.0) [INFO] [stderr] Adding zstd-sys v2.0.12+zstd.1.5.6 (latest: v2.0.13+zstd.1.5.6) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+5ad98b4026d5172f27615b105658bc8bfd677be8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles-core v0.15.0 [INFO] [stderr] Downloaded noodles v0.79.0 [INFO] [stderr] Downloaded noodles-tabix v0.43.0 [INFO] [stderr] Downloaded datafusion-physical-optimizer v41.0.0 [INFO] [stderr] Downloaded noodles-bgzf v0.32.0 [INFO] [stderr] Downloaded datafusion-catalog v41.0.0 [INFO] [stderr] Downloaded datafusion-execution v41.0.0 [INFO] [stderr] Downloaded noodles-fasta v0.42.0 [INFO] [stderr] Downloaded datafusion-functions-aggregate v41.0.0 [INFO] [stderr] Downloaded noodles-bam v0.66.0 [INFO] [stderr] Downloaded datafusion-functions v41.0.0 [INFO] [stderr] Downloaded noodles-vcf v0.62.0 [INFO] [stderr] Downloaded datafusion-common v41.0.0 [INFO] [stderr] Downloaded datafusion-physical-expr v41.0.0 [INFO] [stderr] Downloaded noodles-cram v0.67.0 [INFO] [stderr] Downloaded datafusion-optimizer v41.0.0 [INFO] [stderr] Downloaded datafusion-sql v41.0.0 [INFO] [stderr] Downloaded datafusion-expr v41.0.0 [INFO] [stderr] Downloaded sqlparser v0.49.0 [INFO] [stderr] Downloaded datafusion-physical-plan v41.0.0 [INFO] [stderr] Downloaded noodles-sam v0.63.0 [INFO] [stderr] Downloaded object_store v0.10.2 [INFO] [stderr] Downloaded noodles-bcf v0.59.0 [INFO] [stderr] Downloaded dashmap v6.0.1 [INFO] [stderr] Downloaded datafusion-physical-expr-common v41.0.0 [INFO] [stderr] Downloaded noodles-fastq v0.14.0 [INFO] [stderr] Downloaded noodles-gff v0.35.0 [INFO] [stderr] Downloaded datafusion-functions-nested v41.0.0 [INFO] [stderr] Downloaded noodles-csi v0.37.0 [INFO] [stderr] Downloaded datafusion-common-runtime v41.0.0 [INFO] [stderr] Downloaded exon-common v0.31.0 [INFO] [stderr] Downloaded bit-vec v0.7.0 [INFO] [stderr] Downloaded datafusion v41.0.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+5ad98b4026d5172f27615b105658bc8bfd677be8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1ecdf0eee23986b348aa5bb17f51affb82f41b6940bfbba1a9fbfc3b50741771 [INFO] running `Command { std: "docker" "start" "-a" "1ecdf0eee23986b348aa5bb17f51affb82f41b6940bfbba1a9fbfc3b50741771", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1ecdf0eee23986b348aa5bb17f51affb82f41b6940bfbba1a9fbfc3b50741771", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1ecdf0eee23986b348aa5bb17f51affb82f41b6940bfbba1a9fbfc3b50741771", kill_on_drop: false }` [INFO] [stdout] 1ecdf0eee23986b348aa5bb17f51affb82f41b6940bfbba1a9fbfc3b50741771 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+5ad98b4026d5172f27615b105658bc8bfd677be8" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5a743f49c6fe65de47cce890ef72f962eac5dc2c9e1aa585ee43e8efa19589f6 [INFO] running `Command { std: "docker" "start" "-a" "5a743f49c6fe65de47cce890ef72f962eac5dc2c9e1aa585ee43e8efa19589f6", kill_on_drop: false }` [INFO] [stderr] Compiling chrono-tz-build v0.3.0 [INFO] [stderr] Checking strum v0.26.3 [INFO] [stderr] Checking tokio v1.40.0 [INFO] [stderr] Checking serde_json v1.0.127 [INFO] [stderr] Checking itertools v0.13.0 [INFO] [stderr] Checking sqlparser v0.49.0 [INFO] [stderr] Checking dashmap v6.0.1 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Checking crossbeam-channel v0.5.13 [INFO] [stderr] Checking bstr v1.10.0 [INFO] [stderr] Checking comfy-table v7.1.1 [INFO] [stderr] Checking noodles-bgzf v0.32.0 [INFO] [stderr] Compiling chrono-tz v0.9.0 [INFO] [stderr] Checking noodles-core v0.15.0 [INFO] [stderr] Checking xz2 v0.1.7 [INFO] [stderr] Checking object_store v0.10.2 [INFO] [stderr] Checking datafusion-common-runtime v41.0.0 [INFO] [stderr] Checking tokio-util v0.7.11 [INFO] [stderr] Checking async-compression v0.4.12 [INFO] [stderr] Checking noodles-fasta v0.42.0 [INFO] [stderr] Checking noodles v0.79.0 [INFO] [stderr] Checking arrow-array v52.2.0 [INFO] [stderr] Checking arrow-select v52.2.0 [INFO] [stderr] Checking arrow-row v52.2.0 [INFO] [stderr] Checking arrow-arith v52.2.0 [INFO] [stderr] Checking arrow-cast v52.2.0 [INFO] [stderr] Checking arrow-ord v52.2.0 [INFO] [stderr] Checking arrow-string v52.2.0 [INFO] [stderr] Checking arrow-ipc v52.2.0 [INFO] [stderr] Checking arrow-json v52.2.0 [INFO] [stderr] Checking arrow-csv v52.2.0 [INFO] [stderr] Checking arrow v52.2.0 [INFO] [stderr] Checking parquet v52.2.0 [INFO] [stderr] Checking datafusion-common v41.0.0 [INFO] [stderr] Checking datafusion-expr v41.0.0 [INFO] [stderr] Checking datafusion-execution v41.0.0 [INFO] [stderr] Checking datafusion-physical-expr-common v41.0.0 [INFO] [stderr] Checking datafusion-sql v41.0.0 [INFO] [stderr] Checking datafusion-functions v41.0.0 [INFO] [stderr] Checking datafusion-physical-expr v41.0.0 [INFO] [stderr] Checking datafusion-functions-aggregate v41.0.0 [INFO] [stderr] Checking datafusion-optimizer v41.0.0 [INFO] [stderr] Checking datafusion-physical-plan v41.0.0 [INFO] [stderr] Checking datafusion-functions-nested v41.0.0 [INFO] [stderr] Checking datafusion-physical-optimizer v41.0.0 [INFO] [stderr] Checking datafusion-catalog v41.0.0 [INFO] [stderr] Checking datafusion v41.0.0 [INFO] [stderr] Checking exon-common v0.31.0 [INFO] [stderr] Checking exon-fasta v0.31.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 58.27s [INFO] running `Command { std: "docker" "inspect" "5a743f49c6fe65de47cce890ef72f962eac5dc2c9e1aa585ee43e8efa19589f6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5a743f49c6fe65de47cce890ef72f962eac5dc2c9e1aa585ee43e8efa19589f6", kill_on_drop: false }` [INFO] [stdout] 5a743f49c6fe65de47cce890ef72f962eac5dc2c9e1aa585ee43e8efa19589f6