[INFO] cloning repository https://github.com/timrozday-mgnify/kmer-functional-profiler
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/timrozday-mgnify/kmer-functional-profiler" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftimrozday-mgnify%2Fkmer-functional-profiler", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftimrozday-mgnify%2Fkmer-functional-profiler'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] d2f663eb796a54742fdcc7c8a2e9f0377fa0fb06
[INFO] checking timrozday-mgnify/kmer-functional-profiler against a7c37f9f0ee5e93396106e9de20f4a86b4154e63 for pr-129249-4
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftimrozday-mgnify%2Fkmer-functional-profiler" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-5-tc1/source/.cargo/config.toml
[INFO] removed /workspace/builds/worker-5-tc1/source/rust-toolchain.toml
[INFO] started tweaking git repo https://github.com/timrozday-mgnify/kmer-functional-profiler
[INFO] finished tweaking git repo https://github.com/timrozday-mgnify/kmer-functional-profiler
[INFO] tweaked toml for git repo https://github.com/timrozday-mgnify/kmer-functional-profiler written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/timrozday-mgnify/kmer-functional-profiler on toolchain a7c37f9f0ee5e93396106e9de20f4a86b4154e63
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+a7c37f9f0ee5e93396106e9de20f4a86b4154e63" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/timrozday-mgnify/kmer-functional-profiler already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+a7c37f9f0ee5e93396106e9de20f4a86b4154e63" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pyo3-macros v0.29.2
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.29.2
[INFO] [stderr]   Downloaded pyo3-build-config v0.29.2
[INFO] [stderr]   Downloaded buffer-redux v1.1.0
[INFO] [stderr]   Downloaded target-lexicon v0.13.5
[INFO] [stderr]   Downloaded rusty-fork v0.3.1
[INFO] [stderr]   Downloaded zstd-safe v7.3.0
[INFO] [stderr]   Downloaded bytecount v0.6.9
[INFO] [stderr]   Downloaded crc32fast v1.5.2
[INFO] [stderr]   Downloaded miniz_oxide v0.9.1
[INFO] [stderr]   Downloaded flate2 v1.1.10
[INFO] [stderr]   Downloaded pyo3-ffi v0.29.2
[INFO] [stderr]   Downloaded portable-atomic-util v0.2.8
[INFO] [stderr]   Downloaded numpy v0.29.0
[INFO] [stderr]   Downloaded cc v1.5.1
[INFO] [stderr]   Downloaded zerocopy-derive v0.8.59
[INFO] [stderr]   Downloaded proptest v1.11.0
[INFO] [stderr]   Downloaded zlib-rs v0.6.8
[INFO] [stderr]   Downloaded ndarray v0.17.2
[INFO] [stderr]   Downloaded zerocopy v0.8.59
[INFO] [stderr]   Downloaded needletail v0.7.3
[INFO] [stderr]   Downloaded zstd-sys v2.1.0+zstd.1.5.7
[INFO] [stderr]   Downloaded pyo3 v0.29.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:c0af3998e971868164375a7dfb646c9933ddd1a3bdb00fa2041266763dc1eeab" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] debaad543695bfb0dbb59a81807c82ef9637ef7ae550287d4258e6e4361d9a5f
[INFO] running `Command { std: "docker" "start" "debaad543695bfb0dbb59a81807c82ef9637ef7ae550287d4258e6e4361d9a5f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "debaad543695bfb0dbb59a81807c82ef9637ef7ae550287d4258e6e4361d9a5f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "debaad543695bfb0dbb59a81807c82ef9637ef7ae550287d4258e6e4361d9a5f" "/opt/rustwide/cargo-home/bin/cargo" "+a7c37f9f0ee5e93396106e9de20f4a86b4154e63" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "debaad543695bfb0dbb59a81807c82ef9637ef7ae550287d4258e6e4361d9a5f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "debaad543695bfb0dbb59a81807c82ef9637ef7ae550287d4258e6e4361d9a5f" "/opt/rustwide/cargo-home/bin/cargo" "+a7c37f9f0ee5e93396106e9de20f4a86b4154e63" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.189
[INFO] [stderr]     Checking cfg-if v1.0.5
[INFO] [stderr]    Compiling proc-macro2 v1.0.107
[INFO] [stderr]    Compiling quote v1.0.47
[INFO] [stderr]    Compiling unicode-ident v1.0.26
[INFO] [stderr]    Compiling target-lexicon v0.13.5
[INFO] [stderr]    Compiling autocfg v1.5.1
[INFO] [stderr]    Compiling shlex v2.0.1
[INFO] [stderr]    Compiling find-msvc-tools v0.1.14
[INFO] [stderr]    Compiling pkg-config v0.3.34
[INFO] [stderr]    Compiling crc32fast v1.5.2
[INFO] [stderr]    Compiling zstd-safe v7.3.0
[INFO] [stderr]     Checking once_cell v1.21.4
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]     Checking simd-adler32 v0.3.10
[INFO] [stderr]     Checking adler2 v2.0.1
[INFO] [stderr]    Compiling zerocopy v0.8.59
[INFO] [stderr]     Checking memchr v2.8.3
[INFO] [stderr]    Compiling thiserror v2.0.21
[INFO] [stderr]     Checking miniz_oxide v0.9.1
[INFO] [stderr]    Compiling getrandom v0.4.3
[INFO] [stderr]    Compiling rustix v1.1.5
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]     Checking bitflags v2.13.2
[INFO] [stderr]     Checking fastrand v2.5.0
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling matrixmultiply v0.3.11
[INFO] [stderr]     Checking rustc-hash v2.1.3
[INFO] [stderr]     Checking quick-error v1.2.3
[INFO] [stderr]     Checking fnv v1.0.7
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking unarray v0.1.4
[INFO] [stderr]     Checking regex-syntax v0.8.11
[INFO] [stderr]    Compiling pyo3-build-config v0.29.2
[INFO] [stderr]     Checking bit-set v0.8.0
[INFO] [stderr]     Checking flate2 v1.1.10
[INFO] [stderr]     Checking buffer-redux v1.1.0
[INFO] [stderr]    Compiling syn v2.0.119
[INFO] [stderr]    Compiling syn v3.0.6
[INFO] [stderr]     Checking num-integer v0.1.47
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking wait-timeout v0.2.1
[INFO] [stderr]    Compiling pyo3-ffi v0.29.2
[INFO] [stderr]    Compiling pyo3 v0.29.2
[INFO] [stderr]    Compiling numpy v0.29.0
[INFO] [stderr]     Checking rand_core v0.9.5
[INFO] [stderr]     Checking rand_xorshift v0.4.0
[INFO] [stderr]     Checking rand v0.9.5
[INFO] [stderr]    Compiling jobserver v0.1.35
[INFO] [stderr]     Checking ndarray v0.17.2
[INFO] [stderr]    Compiling cc v1.5.1
[INFO] [stderr]     Checking tempfile v3.27.0
[INFO] [stderr]     Checking rusty-fork v0.3.1
[INFO] [stderr]    Compiling zstd-sys v2.1.0+zstd.1.5.7
[INFO] [stderr]    Compiling thiserror-impl v2.0.21
[INFO] [stderr]    Compiling pyo3-macros-backend v0.29.2
[INFO] [stderr]     Checking zstd v0.13.3
[INFO] [stderr]     Checking needletail v0.7.3
[INFO] [stderr]     Checking ppv-lite86 v0.2.21
[INFO] [stderr]     Checking kmer-functional-profiler-core v0.1.0 (/opt/rustwide/workdir/crates/core)
[INFO] [stderr]     Checking rand_chacha v0.9.0
[INFO] [stderr]     Checking proptest v1.11.0
[INFO] [stderr]    Compiling pyo3-macros v0.29.2
[INFO] [stderr]     Checking kmer-functional-profiler-py v0.1.0 (/opt/rustwide/workdir/crates/py)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 52.81s
[INFO] running `Command { std: "docker" "inspect" "debaad543695bfb0dbb59a81807c82ef9637ef7ae550287d4258e6e4361d9a5f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "debaad543695bfb0dbb59a81807c82ef9637ef7ae550287d4258e6e4361d9a5f", kill_on_drop: false }`
[INFO] [stdout] debaad543695bfb0dbb59a81807c82ef9637ef7ae550287d4258e6e4361d9a5f
