[INFO] cloning repository https://github.com/Inuen/biogenie
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Inuen/biogenie" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FInuen%2Fbiogenie", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FInuen%2Fbiogenie'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] d259c3c3e880d281a06dc512d414a0bab9d0dc34
[INFO] checking Inuen/biogenie against try#2cbf9c3ff35600794d69a7dc7ab399810a067910 for pr-129249-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FInuen%2Fbiogenie" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/Inuen/biogenie
[INFO] finished tweaking git repo https://github.com/Inuen/biogenie
[INFO] tweaked toml for git repo https://github.com/Inuen/biogenie written to /workspace/builds/worker-3-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/Inuen/biogenie on toolchain 2cbf9c3ff35600794d69a7dc7ab399810a067910
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2cbf9c3ff35600794d69a7dc7ab399810a067910" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/Inuen/biogenie already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2cbf9c3ff35600794d69a7dc7ab399810a067910" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3a6becf2bc8dde7f3fa57ede90e4f284e72d296796fc446bbb1e2c7cc0530151" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 34c0f6671e3664308e4b076ea7776e30d0822c0f46e73f0617e469fa8c038b9e
[INFO] running `Command { std: "docker" "start" "34c0f6671e3664308e4b076ea7776e30d0822c0f46e73f0617e469fa8c038b9e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "34c0f6671e3664308e4b076ea7776e30d0822c0f46e73f0617e469fa8c038b9e" "/opt/rustwide/cargo-home/bin/cargo" "+2cbf9c3ff35600794d69a7dc7ab399810a067910" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "34c0f6671e3664308e4b076ea7776e30d0822c0f46e73f0617e469fa8c038b9e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-w" "/opt/rustwide/workdir" "--user" "0:0" "34c0f6671e3664308e4b076ea7776e30d0822c0f46e73f0617e469fa8c038b9e" "/opt/rustwide/cargo-home/bin/cargo" "+2cbf9c3ff35600794d69a7dc7ab399810a067910" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.170
[INFO] [stderr]    Compiling libm v0.2.11
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling serde v1.0.218
[INFO] [stderr]     Checking memchr v2.7.4
[INFO] [stderr]    Compiling quote v1.0.39
[INFO] [stderr]    Compiling cmake v0.1.54
[INFO] [stderr]    Compiling lock_api v0.4.12
[INFO] [stderr]    Compiling matrixmultiply v0.3.9
[INFO] [stderr]    Compiling syn v2.0.99
[INFO] [stderr]    Compiling getrandom v0.3.1
[INFO] [stderr]     Checking bytemuck v1.22.0
[INFO] [stderr]    Compiling libdeflate-sys v0.12.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]    Compiling rustversion v1.0.20
[INFO] [stderr]     Checking anstream v0.6.18
[INFO] [stderr]    Compiling libz-sys v1.1.21
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking wide v0.7.32
[INFO] [stderr]     Checking getrandom v0.2.15
[INFO] [stderr]    Compiling zerocopy v0.8.23
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking clap_lex v0.7.4
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]     Checking clap_builder v4.5.31
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking regex-automata v0.4.9
[INFO] [stderr]     Checking nanorand v0.7.0
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking rand_core v0.9.3
[INFO] [stderr]     Checking simba v0.9.0
[INFO] [stderr]     Checking num_cpus v1.16.0
[INFO] [stderr]     Checking spin v0.9.8
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking futures-sink v0.3.31
[INFO] [stderr]     Checking futures-core v0.3.31
[INFO] [stderr]     Checking indexmap v2.7.1
[INFO] [stderr]     Checking core_affinity v0.8.3
[INFO] [stderr]     Checking libdeflater v0.12.0
[INFO] [stderr]     Checking csv-core v0.1.12
[INFO] [stderr]     Checking fixedbitset v0.5.7
[INFO] [stderr]     Checking regex v1.11.1
[INFO] [stderr]     Checking bit-set v0.8.0
[INFO] [stderr]     Checking ndarray v0.16.1
[INFO] [stderr]     Checking petgraph v0.7.1
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking ordered-float v5.0.0
[INFO] [stderr]     Checking time v0.1.45
[INFO] [stderr]     Checking half v2.5.0
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking unchecked-index v0.2.2
[INFO] [stderr]     Checking strum v0.26.3
[INFO] [stderr]     Checking plotters-backend v0.3.7
[INFO] [stderr]     Checking bytecount v0.6.8
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking plotters-svg v0.3.7
[INFO] [stderr]     Checking ciborium-ll v0.2.2
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[INFO] [stderr]     Checking timeit v0.1.2
[INFO] [stderr]     Checking itertools v0.10.5
[INFO] [stderr]     Checking cast v0.3.0
[INFO] [stderr]     Checking bitap v0.2.0
[INFO] [stderr]     Checking rustc-hash v2.1.1
[INFO] [stderr]     Checking plotters v0.3.7
[INFO] [stderr]     Checking is-terminal v0.4.16
[INFO] [stderr]     Checking anes v0.1.6
[INFO] [stderr]     Checking once_cell v1.20.3
[INFO] [stderr]     Checking oorandom v11.1.5
[INFO] [stderr]    Compiling zerocopy-derive v0.7.35
[INFO] [stderr]    Compiling serde_derive v1.0.218
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling pin-project-internal v1.1.10
[INFO] [stderr]    Compiling clap_derive v4.5.28
[INFO] [stderr]     Checking zerocopy v0.7.35
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.12
[INFO] [stderr]     Checking pin-project v1.1.10
[INFO] [stderr]     Checking flume v0.10.14
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]     Checking criterion-plot v0.5.0
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]     Checking ppv-lite86 v0.2.20
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking rand_chacha v0.9.0
[INFO] [stderr]     Checking thiserror v2.0.12
[INFO] [stderr]     Checking rand v0.9.0
[INFO] [stderr]     Checking clap v4.5.31
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking nalgebra v0.33.2
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking flate2 v1.1.0
[INFO] [stderr]     Checking gzp v0.11.3
[INFO] [stderr]     Checking nucgen v0.1.2
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking multimap v0.10.0
[INFO] [stderr]     Checking csv v1.3.1
[INFO] [stderr]     Checking serde_json v1.0.140
[INFO] [stderr]     Checking ciborium v0.2.2
[INFO] [stderr]     Checking tinytemplate v1.2.1
[INFO] [stderr]     Checking criterion v0.5.1
[INFO] [stderr]     Checking statrs v0.18.0
[INFO] [stderr]     Checking bio v2.2.0
[INFO] [stderr]     Checking biogenie v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `remove_using_bitap`
[INFO] [stdout]  --> benches/compare_benchmarks.rs:3:5
[INFO] [stdout]   |
[INFO] [stdout] 3 |     remove_using_bitap, remove_using_two_way,
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::fmt::Debug`
[INFO] [stdout]  --> benches/compare_benchmarks.rs:6:5
[INFO] [stdout]   |
[INFO] [stdout] 6 | use std::fmt::Debug;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::time::Duration`
[INFO] [stdout]  --> benches/compare_benchmarks.rs:8:5
[INFO] [stdout]   |
[INFO] [stdout] 8 | use std::time::Duration;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 36s
[INFO] running `Command { std: "docker" "inspect" "34c0f6671e3664308e4b076ea7776e30d0822c0f46e73f0617e469fa8c038b9e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "34c0f6671e3664308e4b076ea7776e30d0822c0f46e73f0617e469fa8c038b9e", kill_on_drop: false }`
[INFO] [stdout] 34c0f6671e3664308e4b076ea7776e30d0822c0f46e73f0617e469fa8c038b9e
