[INFO] cloning repository https://github.com/slazicoicr/bam_histogram_qc [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/slazicoicr/bam_histogram_qc" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 73ee3528cb6a555df461966bbdb6ddb85b23fb9d [INFO] checking slazicoicr/bam_histogram_qc against master#368e2fd458a22d0cc133d0c254f2612ee999744f for pr-128351 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/slazicoicr/bam_histogram_qc on toolchain 368e2fd458a22d0cc133d0c254f2612ee999744f [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+368e2fd458a22d0cc133d0c254f2612ee999744f" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/slazicoicr/bam_histogram_qc [INFO] finished tweaking git repo https://github.com/slazicoicr/bam_histogram_qc [INFO] tweaked toml for git repo https://github.com/slazicoicr/bam_histogram_qc written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+368e2fd458a22d0cc133d0c254f2612ee999744f" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 75 packages to latest compatible versions [INFO] [stderr] Adding ansi_term v0.11.0 (latest: v0.12.1) [INFO] [stderr] Adding bitflags v1.3.2 (latest: v2.6.0) [INFO] [stderr] Adding clap v2.33.4 (latest: v4.5.13) [INFO] [stderr] Adding hermit-abi v0.1.19 (latest: v0.4.0) [INFO] [stderr] Adding hts-sys v1.10.3 (latest: v2.1.4) [INFO] [stderr] Adding idna v0.5.0 (latest: v1.0.2) [INFO] [stderr] Adding quick-error v1.2.3 (latest: v2.0.1) [INFO] [stderr] Adding rust-htslib v0.32.0 (latest: v0.47.0) [INFO] [stderr] Adding rustc_version v0.1.7 (latest: v0.4.0) [INFO] [stderr] Adding semver v0.1.20 (latest: v1.0.23) [INFO] [stderr] Adding strsim v0.8.0 (latest: v0.11.1) [INFO] [stderr] Adding textwrap v0.11.0 (latest: v0.16.1) [INFO] [stderr] Adding windows-sys v0.52.0 (latest: v0.59.0) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+368e2fd458a22d0cc133d0c254f2612ee999744f" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded rust-htslib v0.32.0 [INFO] [stderr] Downloaded curl-sys v0.4.74+curl-8.9.0 [INFO] [stderr] Downloaded hts-sys v1.10.3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+368e2fd458a22d0cc133d0c254f2612ee999744f" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 6ed7fbafc6b7772af7d59b9c3408009ebcdd59d03375eda844364b1c7355cf90 [INFO] running `Command { std: "docker" "start" "-a" "6ed7fbafc6b7772af7d59b9c3408009ebcdd59d03375eda844364b1c7355cf90", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "6ed7fbafc6b7772af7d59b9c3408009ebcdd59d03375eda844364b1c7355cf90", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6ed7fbafc6b7772af7d59b9c3408009ebcdd59d03375eda844364b1c7355cf90", kill_on_drop: false }` [INFO] [stdout] 6ed7fbafc6b7772af7d59b9c3408009ebcdd59d03375eda844364b1c7355cf90 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+368e2fd458a22d0cc133d0c254f2612ee999744f" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ed9794530bb47a62fd2e52664d3c344ffbc877247fc740e6bb5aec1b040ea815 [INFO] running `Command { std: "docker" "start" "-a" "ed9794530bb47a62fd2e52664d3c344ffbc877247fc740e6bb5aec1b040ea815", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.155 [INFO] [stderr] Compiling pkg-config v0.3.30 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling unicode-ident v1.0.12 [INFO] [stderr] Checking memchr v2.7.4 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Checking tinyvec_macros v0.1.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rustversion v1.0.17 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking tinyvec v1.8.0 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Checking regex-syntax v0.8.4 [INFO] [stderr] Compiling quote v1.0.36 [INFO] [stderr] Compiling thiserror v1.0.63 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling jobserver v0.1.32 [INFO] [stderr] Compiling syn v2.0.72 [INFO] [stderr] Checking unicode-bidi v0.3.15 [INFO] [stderr] Checking percent-encoding v2.3.1 [INFO] [stderr] Checking unicode-normalization v0.1.23 [INFO] [stderr] Compiling serde v1.0.204 [INFO] [stderr] Compiling cc v1.1.7 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Checking form_urlencoded v1.2.1 [INFO] [stderr] Compiling serde_json v1.0.121 [INFO] [stderr] Checking lazy_static v1.5.0 [INFO] [stderr] Checking unicode-width v0.1.13 [INFO] [stderr] Checking idna v0.5.0 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Checking ryu v1.0.18 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking bitflags v1.3.2 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking itoa v1.0.11 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking clap v2.33.4 [INFO] [stderr] Compiling openssl-src v300.3.1+3.3.1 [INFO] [stderr] Checking url v2.5.2 [INFO] [stderr] Checking regex-automata v0.4.7 [INFO] [stderr] Compiling libz-sys v1.1.18 [INFO] [stderr] Compiling openssl-sys v0.9.103 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling curl-sys v0.4.74+curl-8.9.0 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling hts-sys v1.10.3 [INFO] [stderr] Checking regex v1.10.5 [INFO] [stderr] Compiling thiserror-impl v1.0.63 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling serde_derive v1.0.204 [INFO] [stderr] Checking bio-types v1.0.3 [INFO] [stderr] Checking rust-htslib v0.32.0 [INFO] [stderr] Checking bam_histogram_qc v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> src/main.rs:123:14 [INFO] [stdout] | [INFO] [stdout] 123 | BamError(BamError), [INFO] [stdout] | -------- ^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `Error` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 123 | BamError(()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> src/main.rs:124:15 [INFO] [stdout] | [INFO] [stdout] 124 | JSONError(serde_json::error::Error), [INFO] [stdout] | --------- ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `Error` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 124 | JSONError(()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> src/main.rs:123:14 [INFO] [stdout] | [INFO] [stdout] 123 | BamError(BamError), [INFO] [stdout] | -------- ^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `Error` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 123 | BamError(()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `0` is never read [INFO] [stdout] --> src/main.rs:124:15 [INFO] [stdout] | [INFO] [stdout] 124 | JSONError(serde_json::error::Error), [INFO] [stdout] | --------- ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | field in this variant [INFO] [stdout] | [INFO] [stdout] = note: `Error` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] help: consider changing the field to be of unit type to suppress this warning while preserving the field numbering, or remove the field [INFO] [stdout] | [INFO] [stdout] 124 | JSONError(()), [INFO] [stdout] | ~~ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 05s [INFO] running `Command { std: "docker" "inspect" "ed9794530bb47a62fd2e52664d3c344ffbc877247fc740e6bb5aec1b040ea815", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ed9794530bb47a62fd2e52664d3c344ffbc877247fc740e6bb5aec1b040ea815", kill_on_drop: false }` [INFO] [stdout] ed9794530bb47a62fd2e52664d3c344ffbc877247fc740e6bb5aec1b040ea815