[INFO] fetching crate anndata 0.3.3... [INFO] checking anndata-0.3.3 against master#2e6fc425411280c658d852813de01c5157255088 for pr-128013 [INFO] extracting crate anndata 0.3.3 into /workspace/builds/worker-7-tc1/source [INFO] validating manifest of crates.io crate anndata 0.3.3 on toolchain 2e6fc425411280c658d852813de01c5157255088 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2e6fc425411280c658d852813de01c5157255088" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate anndata 0.3.3 [INFO] finished tweaking crates.io crate anndata 0.3.3 [INFO] tweaked toml for crates.io crate anndata 0.3.3 written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2e6fc425411280c658d852813de01c5157255088" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 214 packages to latest compatible versions [INFO] [stderr] Adding atoi_simd v0.15.6 (latest: v0.16.0) [INFO] [stderr] Adding base64 v0.21.7 (latest: v0.22.1) [INFO] [stderr] Adding bit-set v0.5.3 (latest: v0.8.0) [INFO] [stderr] Adding bit-vec v0.6.3 (latest: v0.8.0) [INFO] [stderr] Adding chrono-tz v0.8.6 (latest: v0.9.0) [INFO] [stderr] Adding chrono-tz-build v0.2.1 (latest: v0.3.0) [INFO] [stderr] Adding heck v0.4.1 (latest: v0.5.0) [INFO] [stderr] Adding itertools v0.12.1 (latest: v0.13.0) [INFO] [stderr] Adding linux-raw-sys v0.4.14 (latest: v0.6.4) [INFO] [stderr] Adding memmap2 v0.7.1 (latest: v0.9.4) [INFO] [stderr] Adding nalgebra v0.32.6 (latest: v0.33.0) [INFO] [stderr] Adding nalgebra-sparse v0.9.0 (latest: v0.10.0) [INFO] [stderr] Adding planus v0.3.1 (latest: v0.4.0) [INFO] [stderr] Adding polars v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-arrow v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-compute v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-core v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-error v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-io v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-lazy v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-ops v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-parquet v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-pipe v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-plan v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-row v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-sql v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-time v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding polars-utils v0.39.2 (latest: v0.41.3) [INFO] [stderr] Adding quick-error v1.2.3 (latest: v2.0.1) [INFO] [stderr] Adding simba v0.8.1 (latest: v0.9.0) [INFO] [stderr] Adding siphasher v0.3.11 (latest: v1.0.1) [INFO] [stderr] Adding sqlparser v0.39.0 (latest: v0.49.0) [INFO] [stderr] Adding strum_macros v0.25.3 (latest: v0.26.4) [INFO] [stderr] Adding syn v1.0.109 (latest: v2.0.72) [INFO] [stderr] Adding wasi v0.11.0+wasi-snapshot-preview1 (latest: v0.13.1+wasi-0.2.0) [INFO] [stderr] Adding windows v0.52.0 (latest: v0.58.0) [INFO] [stderr] Adding windows-core v0.52.0 (latest: v0.58.0) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2e6fc425411280c658d852813de01c5157255088" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded replace_with v0.1.7 [INFO] [stderr] Downloaded permutation v0.4.1 [INFO] [stderr] Downloaded nalgebra-macros v0.2.2 [INFO] [stderr] Downloaded nalgebra-sparse v0.9.0 [INFO] [stderr] Downloaded safe_arch v0.7.2 [INFO] [stderr] Downloaded wide v0.7.26 [INFO] [stderr] Downloaded proptest v1.5.0 [INFO] [stderr] Downloaded nalgebra v0.32.6 [INFO] [stderr] Downloaded libz-ng-sys v1.1.15 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+2e6fc425411280c658d852813de01c5157255088" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a4248935768ef5fd7299280c03e3bd8c822b97ab0925965ec2cdc552d0c3c6e7 [INFO] running `Command { std: "docker" "start" "-a" "a4248935768ef5fd7299280c03e3bd8c822b97ab0925965ec2cdc552d0c3c6e7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a4248935768ef5fd7299280c03e3bd8c822b97ab0925965ec2cdc552d0c3c6e7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a4248935768ef5fd7299280c03e3bd8c822b97ab0925965ec2cdc552d0c3c6e7", kill_on_drop: false }` [INFO] [stdout] a4248935768ef5fd7299280c03e3bd8c822b97ab0925965ec2cdc552d0c3c6e7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+2e6fc425411280c658d852813de01c5157255088" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7129921a59ba35c40c9fc92f6f609aa85ba23dafdc7b513275afd802ba31bbea [INFO] running `Command { std: "docker" "start" "-a" "7129921a59ba35c40c9fc92f6f609aa85ba23dafdc7b513275afd802ba31bbea", kill_on_drop: false }` [INFO] [stderr] Checking bitflags v2.6.0 [INFO] [stderr] Checking regex-syntax v0.8.4 [INFO] [stderr] Compiling serde v1.0.204 [INFO] [stderr] Checking either v1.13.0 [INFO] [stderr] Compiling target-features v0.1.6 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling libc v0.2.155 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Checking array-init-cursor v0.2.0 [INFO] [stderr] Compiling smartstring v1.0.1 [INFO] [stderr] Compiling syn v2.0.72 [INFO] [stderr] Checking ahash v0.8.11 [INFO] [stderr] Checking allocator-api2 v0.2.18 [INFO] [stderr] Compiling matrixmultiply v0.3.8 [INFO] [stderr] Compiling polars-utils v0.39.2 [INFO] [stderr] Checking simdutf8 v0.1.4 [INFO] [stderr] Checking planus v0.3.1 [INFO] [stderr] Checking chrono v0.4.38 [INFO] [stderr] Checking raw-cpuid v11.1.0 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Compiling polars-arrow v0.39.2 [INFO] [stderr] Compiling lock_api v0.4.12 [INFO] [stderr] Compiling parking_lot_core v0.9.10 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking atoi v2.0.0 [INFO] [stderr] Checking foreign_vec v0.1.0 [INFO] [stderr] Checking ethnum v1.5.0 [INFO] [stderr] Checking itoap v1.0.1 [INFO] [stderr] Checking strength_reduce v0.2.4 [INFO] [stderr] Checking atoi_simd v0.15.6 [INFO] [stderr] Checking streaming-iterator v0.1.9 [INFO] [stderr] Checking smallvec v1.13.2 [INFO] [stderr] Checking fast-float v0.2.0 [INFO] [stderr] Compiling jobserver v0.1.32 [INFO] [stderr] Compiling polars-compute v0.39.2 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Compiling polars-core v0.39.2 [INFO] [stderr] Checking unicode-width v0.1.13 [INFO] [stderr] Checking strum v0.26.3 [INFO] [stderr] Compiling cc v1.1.6 [INFO] [stderr] Checking parking_lot v0.12.3 [INFO] [stderr] Compiling polars-ops v0.39.2 [INFO] [stderr] Checking xxhash-rust v0.8.12 [INFO] [stderr] Compiling zstd-safe v7.2.0 [INFO] [stderr] Checking argminmax v0.6.2 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Checking crc32fast v1.4.2 [INFO] [stderr] Checking miniz_oxide v0.7.4 [INFO] [stderr] Checking crossterm v0.27.0 [INFO] [stderr] Checking now v0.1.3 [INFO] [stderr] Compiling paste v1.0.15 [INFO] [stderr] Checking memmap2 v0.7.1 [INFO] [stderr] Compiling polars-plan v0.39.2 [INFO] [stderr] Checking home v0.5.9 [INFO] [stderr] Compiling rustix v0.38.34 [INFO] [stderr] Checking bytes v1.6.1 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Compiling polars-lazy v0.39.2 [INFO] [stderr] Checking fallible-streaming-iterator v0.1.9 [INFO] [stderr] Checking linux-raw-sys v0.4.14 [INFO] [stderr] Checking streaming-decompression v0.1.2 [INFO] [stderr] Compiling polars v0.39.2 [INFO] [stderr] Checking fastrand v2.1.0 [INFO] [stderr] Compiling seq-macro v0.3.5 [INFO] [stderr] Checking parquet-format-safe v0.2.4 [INFO] [stderr] Checking wait-timeout v0.2.0 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking itertools v0.12.1 [INFO] [stderr] Checking rand_xorshift v0.3.0 [INFO] [stderr] Checking unarray v0.1.4 [INFO] [stderr] Checking replace_with v0.1.7 [INFO] [stderr] Checking permutation v0.4.1 [INFO] [stderr] Checking bit-set v0.5.3 [INFO] [stderr] Compiling cmake v0.1.50 [INFO] [stderr] Checking regex-automata v0.4.7 [INFO] [stderr] Compiling psm v0.1.21 [INFO] [stderr] Compiling stacker v0.1.15 [INFO] [stderr] Compiling zstd-sys v2.0.12+zstd.1.5.6 [INFO] [stderr] Compiling libz-ng-sys v1.1.15 [INFO] [stderr] Checking hashbrown v0.14.5 [INFO] [stderr] Checking indexmap v2.2.6 [INFO] [stderr] Checking tempfile v3.10.1 [INFO] [stderr] Checking rusty-fork v0.3.0 [INFO] [stderr] Checking ndarray-rand v0.14.0 [INFO] [stderr] Checking proptest v1.5.0 [INFO] [stderr] Checking regex v1.10.5 [INFO] [stderr] Compiling bytemuck_derive v1.7.0 [INFO] [stderr] Compiling serde_derive v1.0.204 [INFO] [stderr] Compiling thiserror-impl v1.0.63 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling recursive-proc-macro-impl v0.1.1 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling nalgebra-macros v0.2.2 [INFO] [stderr] Checking recursive v0.1.1 [INFO] [stderr] Compiling multiversion-macros v0.7.4 [INFO] [stderr] Checking thiserror v1.0.63 [INFO] [stderr] Checking bytemuck v1.16.1 [INFO] [stderr] Checking safe_arch v0.7.2 [INFO] [stderr] Checking multiversion v0.7.4 [INFO] [stderr] Checking comfy-table v7.1.1 [INFO] [stderr] Checking wide v0.7.26 [INFO] [stderr] Checking zstd v0.13.2 [INFO] [stderr] Checking simba v0.8.1 [INFO] [stderr] Checking flate2 v1.0.30 [INFO] [stderr] Checking polars-arrow-format v0.1.0 [INFO] [stderr] Checking polars-error v0.39.2 [INFO] [stderr] Checking nalgebra v0.32.6 [INFO] [stderr] Checking polars-row v0.39.2 [INFO] [stderr] Checking polars-parquet v0.39.2 [INFO] [stderr] Checking nalgebra-sparse v0.9.0 [INFO] [stderr] Checking polars-time v0.39.2 [INFO] [stderr] Checking polars-io v0.39.2 [INFO] [stderr] Checking anndata v0.3.3 (/opt/rustwide/workdir) [INFO] [stdout] warning: method `get_index` is never used [INFO] [stdout] --> src/container/base.rs:860:19 [INFO] [stdout] | [INFO] [stdout] 859 | impl InnerStackedArrayElem { [INFO] [stdout] | ----------------------------------------- method in this implementation [INFO] [stdout] 860 | pub(crate) fn get_index(&self) -> &VecVecIndex { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `get_index` is never used [INFO] [stdout] --> src/container/base.rs:860:19 [INFO] [stdout] | [INFO] [stdout] 859 | impl InnerStackedArrayElem { [INFO] [stdout] | ----------------------------------------- method in this implementation [INFO] [stdout] 860 | pub(crate) fn get_index(&self) -> &VecVecIndex { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 23.63s [INFO] running `Command { std: "docker" "inspect" "7129921a59ba35c40c9fc92f6f609aa85ba23dafdc7b513275afd802ba31bbea", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7129921a59ba35c40c9fc92f6f609aa85ba23dafdc7b513275afd802ba31bbea", kill_on_drop: false }` [INFO] [stdout] 7129921a59ba35c40c9fc92f6f609aa85ba23dafdc7b513275afd802ba31bbea