[INFO] fetching crate exon-cram 0.31.0... [INFO] checking exon-cram-0.31.0 against master#22572d0994593197593e2a1b7b18d720a9a349a7 for pr-126452-1 [INFO] extracting crate exon-cram 0.31.0 into /workspace/builds/worker-5-tc1/source [INFO] validating manifest of crates.io crate exon-cram 0.31.0 on toolchain 22572d0994593197593e2a1b7b18d720a9a349a7 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+22572d0994593197593e2a1b7b18d720a9a349a7" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate exon-cram 0.31.0 [INFO] finished tweaking crates.io crate exon-cram 0.31.0 [INFO] tweaked toml for crates.io crate exon-cram 0.31.0 written to /workspace/builds/worker-5-tc1/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+22572d0994593197593e2a1b7b18d720a9a349a7" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 268 packages to latest compatible versions [INFO] [stderr] Adding addr2line v0.22.0 (latest: v0.24.1) [INFO] [stderr] Adding bit-vec v0.7.0 (latest: v0.8.0) [INFO] [stderr] Adding bitflags v1.3.2 (latest: v2.6.0) [INFO] [stderr] Adding fixedbitset v0.4.2 (latest: v0.5.7) [INFO] [stderr] Adding generic-array v0.14.7 (latest: v1.1.0) [INFO] [stderr] Adding gimli v0.29.0 (latest: v0.31.0) [INFO] [stderr] Adding heck v0.4.1 (latest: v0.5.0) [INFO] [stderr] Adding hermit-abi v0.3.9 (latest: v0.4.0) [INFO] [stderr] Adding idna v0.5.0 (latest: v1.0.2) [INFO] [stderr] Adding integer-encoding v3.0.4 (latest: v4.0.2) [INFO] [stderr] Adding itertools v0.12.1 (latest: v0.13.0) [INFO] [stderr] Adding linux-raw-sys v0.4.14 (latest: v0.6.5) [INFO] [stderr] Adding miniz_oxide v0.7.4 (latest: v0.8.0) [INFO] [stderr] Adding object_store v0.10.2 (latest: v0.11.0) [INFO] [stderr] Adding ordered-float v2.10.1 (latest: v4.2.2) [INFO] [stderr] Adding siphasher v0.3.11 (latest: v1.0.1) [INFO] [stderr] Adding snafu v0.7.5 (latest: v0.8.4) [INFO] [stderr] Adding snafu-derive v0.7.5 (latest: v0.8.4) [INFO] [stderr] Adding sqlparser v0.49.0 (latest: v0.50.0) [INFO] [stderr] Adding syn v1.0.109 (latest: v2.0.77) [INFO] [stderr] Adding wasi v0.11.0+wasi-snapshot-preview1 (latest: v0.13.2+wasi-0.2.1) [INFO] [stderr] Adding windows-core v0.52.0 (latest: v0.58.0) [INFO] [stderr] Adding windows-sys v0.52.0 (latest: v0.59.0) [INFO] [stderr] Adding zstd-sys v2.0.12+zstd.1.5.6 (latest: v2.0.13+zstd.1.5.6) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+22572d0994593197593e2a1b7b18d720a9a349a7" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles v0.79.0 [INFO] [stderr] Downloaded noodles-csi v0.37.0 [INFO] [stderr] Downloaded exon-common v0.31.0 [INFO] [stderr] Downloaded noodles-tabix v0.43.0 [INFO] [stderr] Downloaded exon-sam v0.31.0 [INFO] [stderr] Downloaded noodles-fasta v0.42.0 [INFO] [stderr] Downloaded coitrees v0.4.0 [INFO] [stderr] Downloaded noodles-bcf v0.59.0 [INFO] [stderr] Downloaded noodles-sam v0.63.0 [INFO] [stderr] Downloaded noodles-cram v0.67.0 [INFO] [stderr] Downloaded noodles-bam v0.66.0 [INFO] [stderr] Downloaded noodles-gff v0.35.0 [INFO] [stderr] Downloaded noodles-bgzf v0.32.0 [INFO] [stderr] Downloaded noodles-fastq v0.14.0 [INFO] [stderr] Downloaded bit-vec v0.7.0 [INFO] [stderr] Downloaded noodles-vcf v0.62.0 [INFO] [stderr] Downloaded noodles-core v0.15.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+22572d0994593197593e2a1b7b18d720a9a349a7" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 78a5c76ee3af86a49d2301bea862e5885b0c26378a6a2b196d0093c0b358a903 [INFO] running `Command { std: "docker" "start" "-a" "78a5c76ee3af86a49d2301bea862e5885b0c26378a6a2b196d0093c0b358a903", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "78a5c76ee3af86a49d2301bea862e5885b0c26378a6a2b196d0093c0b358a903", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "78a5c76ee3af86a49d2301bea862e5885b0c26378a6a2b196d0093c0b358a903", kill_on_drop: false }` [INFO] [stdout] 78a5c76ee3af86a49d2301bea862e5885b0c26378a6a2b196d0093c0b358a903 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:923055f121b5182466d55868a8b05e67af8ba4a3a3f6bad814e953ca3cd3ac2a" "/opt/rustwide/cargo-home/bin/cargo" "+22572d0994593197593e2a1b7b18d720a9a349a7" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] cf6d172d96517f2a76b652862c2b9bb59d094c92fc77db054f186a857cd942e4 [INFO] running `Command { std: "docker" "start" "-a" "cf6d172d96517f2a76b652862c2b9bb59d094c92fc77db054f186a857cd942e4", kill_on_drop: false }` [INFO] [stderr] Checking lexical-util v0.8.5 [INFO] [stderr] Checking tokio v1.40.0 [INFO] [stderr] Checking crossbeam-channel v0.5.13 [INFO] [stderr] Checking bstr v1.10.0 [INFO] [stderr] Checking bit-vec v0.7.0 [INFO] [stderr] Checking coitrees v0.4.0 [INFO] [stderr] Checking lexical-write-integer v0.8.5 [INFO] [stderr] Checking lexical-parse-integer v0.8.6 [INFO] [stderr] Checking noodles-core v0.15.0 [INFO] [stderr] Checking lexical-parse-float v0.8.5 [INFO] [stderr] Checking lexical-write-float v0.8.5 [INFO] [stderr] Checking lexical-core v0.8.5 [INFO] [stderr] Checking arrow-cast v52.2.0 [INFO] [stderr] Checking arrow-ipc v52.2.0 [INFO] [stderr] Checking arrow-json v52.2.0 [INFO] [stderr] Checking arrow-csv v52.2.0 [INFO] [stderr] Checking object_store v0.10.2 [INFO] [stderr] Checking tokio-util v0.7.11 [INFO] [stderr] Checking datafusion-common-runtime v41.0.0 [INFO] [stderr] Checking async-compression v0.4.12 [INFO] [stderr] Checking noodles-bgzf v0.32.0 [INFO] [stderr] Checking arrow v52.2.0 [INFO] [stderr] Checking noodles-csi v0.37.0 [INFO] [stderr] Checking noodles-fasta v0.42.0 [INFO] [stderr] Checking noodles-sam v0.63.0 [INFO] [stderr] Checking parquet v52.2.0 [INFO] [stderr] Checking noodles-bam v0.66.0 [INFO] [stderr] Checking noodles-cram v0.67.0 [INFO] [stderr] Checking noodles v0.79.0 [INFO] [stderr] Checking datafusion-common v41.0.0 [INFO] [stderr] Checking datafusion-expr v41.0.0 [INFO] [stderr] Checking datafusion-execution v41.0.0 [INFO] [stderr] Checking datafusion-physical-expr-common v41.0.0 [INFO] [stderr] Checking datafusion-sql v41.0.0 [INFO] [stderr] Checking datafusion-functions v41.0.0 [INFO] [stderr] Checking datafusion-functions-aggregate v41.0.0 [INFO] [stderr] Checking datafusion-physical-expr v41.0.0 [INFO] [stderr] Checking datafusion-physical-plan v41.0.0 [INFO] [stderr] Checking datafusion-optimizer v41.0.0 [INFO] [stderr] Checking datafusion-functions-nested v41.0.0 [INFO] [stderr] Checking datafusion-physical-optimizer v41.0.0 [INFO] [stderr] Checking datafusion-catalog v41.0.0 [INFO] [stderr] Checking datafusion v41.0.0 [INFO] [stderr] Checking exon-common v0.31.0 [INFO] [stderr] Checking exon-sam v0.31.0 [INFO] [stderr] Checking exon-cram v0.31.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 47.67s [INFO] running `Command { std: "docker" "inspect" "cf6d172d96517f2a76b652862c2b9bb59d094c92fc77db054f186a857cd942e4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cf6d172d96517f2a76b652862c2b9bb59d094c92fc77db054f186a857cd942e4", kill_on_drop: false }` [INFO] [stdout] cf6d172d96517f2a76b652862c2b9bb59d094c92fc77db054f186a857cd942e4