[INFO] fetching crate rustybam 0.1.33... [INFO] checking rustybam-0.1.33 against master#506512391b1a75ae450d36c9420978402a91abcc for pr-125384 [INFO] extracting crate rustybam 0.1.33 into /workspace/builds/worker-0-tc1/source [INFO] validating manifest of crates.io crate rustybam 0.1.33 on toolchain 506512391b1a75ae450d36c9420978402a91abcc [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+506512391b1a75ae450d36c9420978402a91abcc" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] removed /workspace/builds/worker-0-tc1/source/.cargo/config [INFO] started tweaking crates.io crate rustybam 0.1.33 [INFO] finished tweaking crates.io crate rustybam 0.1.33 [INFO] tweaked toml for crates.io crate rustybam 0.1.33 written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] crate crates.io crate rustybam 0.1.33 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+506512391b1a75ae450d36c9420978402a91abcc" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: file `/workspace/builds/worker-0-tc1/source/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded bio-types v1.0.0 [INFO] [stderr] Downloaded needletail v0.5.1 [INFO] [stderr] Downloaded calmio_filters v0.1.0 [INFO] [stderr] Downloaded calm_io v0.1.1 [INFO] [stderr] Downloaded strum_macros v0.25.0 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded clap_complete v3.2.5 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded wide v0.7.10 [INFO] [stderr] Downloaded safe_arch v0.7.0 [INFO] [stderr] Downloaded libdeflate-sys v0.12.0 [INFO] [stderr] Downloaded bio v1.3.1 [INFO] [stderr] Downloaded rust-htslib v0.44.1 [INFO] [stderr] Downloaded core_affinity v0.8.0 [INFO] [stderr] Downloaded libdeflater v0.12.0 [INFO] [stderr] Downloaded buffer-redux v1.0.0 [INFO] [stderr] Downloaded gzp v0.11.3 [INFO] [stderr] Downloaded curl-sys v0.4.63+curl-8.1.2 [INFO] [stderr] Downloaded hts-sys v2.1.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:beeedbb442662e57d416641ecc3200b38e573c25b057896194468d05594dd835" "/opt/rustwide/cargo-home/bin/cargo" "+506512391b1a75ae450d36c9420978402a91abcc" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 637a9a99ee3d2af280c907bb953e11b625ddcecde128e1c93ad9000821fef29e [INFO] running `Command { std: "docker" "start" "-a" "637a9a99ee3d2af280c907bb953e11b625ddcecde128e1c93ad9000821fef29e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "637a9a99ee3d2af280c907bb953e11b625ddcecde128e1c93ad9000821fef29e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "637a9a99ee3d2af280c907bb953e11b625ddcecde128e1c93ad9000821fef29e", kill_on_drop: false }` [INFO] [stdout] 637a9a99ee3d2af280c907bb953e11b625ddcecde128e1c93ad9000821fef29e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=allow" "-e" "RUSTDOCFLAGS=--cap-lints=allow" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:beeedbb442662e57d416641ecc3200b38e573c25b057896194468d05594dd835" "/opt/rustwide/cargo-home/bin/cargo" "+506512391b1a75ae450d36c9420978402a91abcc" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4fbf15b61b536f2fcd5486fd08b4ba09ebe63d3a654844de09d1d5d62b76eb24 [INFO] running `Command { std: "docker" "start" "-a" "4fbf15b61b536f2fcd5486fd08b4ba09ebe63d3a654844de09d1d5d62b76eb24", kill_on_drop: false }` [INFO] [stderr] warning: file `/opt/rustwide/workdir/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] [stderr] Compiling libc v0.2.147 [INFO] [stderr] Compiling proc-macro2 v1.0.63 [INFO] [stderr] Compiling quote v1.0.29 [INFO] [stderr] Compiling unicode-ident v1.0.9 [INFO] [stderr] Compiling pkg-config v0.3.27 [INFO] [stderr] Compiling memchr v2.5.0 [INFO] [stderr] Compiling libm v0.2.7 [INFO] [stderr] Compiling serde v1.0.164 [INFO] [stderr] Compiling rustversion v1.0.12 [INFO] [stderr] Compiling crossbeam-utils v0.8.16 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Compiling memoffset v0.9.0 [INFO] [stderr] Compiling matrixmultiply v0.3.7 [INFO] [stderr] Compiling paste v1.0.12 [INFO] [stderr] Checking ppv-lite86 v0.2.17 [INFO] [stderr] Checking bytemuck v1.13.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling thiserror v1.0.40 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Compiling lock_api v0.4.10 [INFO] [stderr] Compiling crossbeam-epoch v0.9.15 [INFO] [stderr] Checking safe_arch v0.7.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling hashbrown v0.12.3 [INFO] [stderr] Checking regex-syntax v0.7.2 [INFO] [stderr] Compiling termcolor v1.2.0 [INFO] [stderr] Compiling typenum v1.16.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling os_str_bytes v6.5.1 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Checking aho-corasick v1.0.2 [INFO] [stderr] Checking wide v0.7.10 [INFO] [stderr] Compiling clap_lex v0.2.4 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling jobserver v0.1.26 [INFO] [stderr] Compiling syn v2.0.22 [INFO] [stderr] Checking getrandom v0.2.10 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Checking num_cpus v1.16.0 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling cc v1.0.79 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking either v1.8.1 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Compiling futures-core v0.3.28 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling textwrap v0.16.0 [INFO] [stderr] Compiling once_cell v1.18.0 [INFO] [stderr] Checking miniz_oxide v0.7.1 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking num-complex v0.4.3 [INFO] [stderr] Compiling cmake v0.1.50 [INFO] [stderr] Compiling openssl-src v111.26.0+1.1.1u [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking unicode-normalization v0.1.22 [INFO] [stderr] Checking percent-encoding v2.3.0 [INFO] [stderr] Checking simba v0.6.0 [INFO] [stderr] Compiling log v0.4.19 [INFO] [stderr] Checking unicode-bidi v0.3.13 [INFO] [stderr] Compiling anyhow v1.0.71 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling snap v1.1.0 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Compiling rayon-core v1.11.0 [INFO] [stderr] Checking spin v0.9.8 [INFO] [stderr] Checking form_urlencoded v1.2.0 [INFO] [stderr] Compiling libz-sys v1.1.9 [INFO] [stderr] Compiling openssl-sys v0.9.90 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling curl-sys v0.4.63+curl-8.1.2 [INFO] [stderr] Checking regex v1.8.4 [INFO] [stderr] Compiling libdeflate-sys v0.12.0 [INFO] [stderr] Compiling hts-sys v2.1.1 [INFO] [stderr] Checking idna v0.4.0 [INFO] [stderr] Checking crossbeam-deque v0.8.3 [INFO] [stderr] Checking nanorand v0.7.0 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking crossbeam-channel v0.5.8 [INFO] [stderr] Checking safemem v0.3.3 [INFO] [stderr] Checking itoa v1.0.6 [INFO] [stderr] Checking bytecount v0.6.3 [INFO] [stderr] Checking ryu v1.0.13 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking futures-sink v0.3.28 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking url v2.4.0 [INFO] [stderr] Checking petgraph v0.6.3 [INFO] [stderr] Checking buffer-redux v1.0.0 [INFO] [stderr] Checking bit-set v0.5.3 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking ordered-float v3.7.0 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking itertools v0.11.0 [INFO] [stderr] Checking core_affinity v0.8.0 [INFO] [stderr] Checking time v0.1.45 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking bytes v1.4.0 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Checking iana-time-zone v0.1.57 [INFO] [stderr] Checking env_logger v0.9.3 [INFO] [stderr] Checking colored v2.0.0 [INFO] [stderr] Checking chrono v0.4.26 [INFO] [stderr] Checking rayon v1.7.0 [INFO] [stderr] Checking itertools v0.10.5 [INFO] [stderr] Checking natord v1.0.9 [INFO] [stderr] Checking bimap v0.6.3 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Checking libdeflater v0.12.0 [INFO] [stderr] Compiling clap_derive v3.2.25 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling strum_macros v0.24.3 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling enum-map-derive v0.6.0 [INFO] [stderr] Compiling calmio_filters v0.1.0 [INFO] [stderr] Compiling getset v0.1.2 [INFO] [stderr] Compiling serde_derive v1.0.164 [INFO] [stderr] Compiling thiserror-impl v1.0.40 [INFO] [stderr] Compiling pin-project-internal v1.1.2 [INFO] [stderr] Compiling strum_macros v0.25.0 [INFO] [stderr] Checking calm_io v0.1.1 [INFO] [stderr] Checking enum-map v1.1.1 [INFO] [stderr] Checking pin-project v1.1.2 [INFO] [stderr] Checking flume v0.10.14 [INFO] [stderr] Checking bio-types v1.0.0 [INFO] [stderr] Checking nalgebra v0.29.0 [INFO] [stderr] Compiling clap v3.2.25 [INFO] [stderr] Checking xz2 v0.1.7 [INFO] [stderr] Checking flate2 v1.0.26 [INFO] [stderr] Checking gzp v0.11.3 [INFO] [stderr] Checking needletail v0.5.1 [INFO] [stderr] Compiling clap_complete v3.2.5 [INFO] [stderr] Compiling rustybam v0.1.33 (/opt/rustwide/workdir) [INFO] [stderr] Checking multimap v0.8.3 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking csv v1.2.2 [INFO] [stderr] Checking statrs v0.16.0 [INFO] [stderr] Checking bio v1.3.1 [INFO] [stderr] Checking rust-htslib v0.44.1 [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 36.61s [INFO] running `Command { std: "docker" "inspect" "4fbf15b61b536f2fcd5486fd08b4ba09ebe63d3a654844de09d1d5d62b76eb24", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4fbf15b61b536f2fcd5486fd08b4ba09ebe63d3a654844de09d1d5d62b76eb24", kill_on_drop: false }` [INFO] [stdout] 4fbf15b61b536f2fcd5486fd08b4ba09ebe63d3a654844de09d1d5d62b76eb24 [INFO] checking rustybam-0.1.33 against try#dae34b759e282c069aa28752564694effd121a63 for pr-125384 [INFO] extracting crate rustybam 0.1.33 into /workspace/builds/worker-0-tc2/source [INFO] validating manifest of crates.io crate rustybam 0.1.33 on toolchain dae34b759e282c069aa28752564694effd121a63 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dae34b759e282c069aa28752564694effd121a63" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] removed /workspace/builds/worker-0-tc2/source/.cargo/config [INFO] started tweaking crates.io crate rustybam 0.1.33 [INFO] finished tweaking crates.io crate rustybam 0.1.33 [INFO] tweaked toml for crates.io crate rustybam 0.1.33 written to /workspace/builds/worker-0-tc2/source/Cargo.toml [INFO] crate crates.io crate rustybam 0.1.33 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+dae34b759e282c069aa28752564694effd121a63" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: file `/workspace/builds/worker-0-tc2/source/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:beeedbb442662e57d416641ecc3200b38e573c25b057896194468d05594dd835" "/opt/rustwide/cargo-home/bin/cargo" "+dae34b759e282c069aa28752564694effd121a63" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 6e4cb0f07d9c2a3f2650c8a99f5283c376064ff97b570910e4601f7d26524f1a [INFO] running `Command { std: "docker" "start" "-a" "6e4cb0f07d9c2a3f2650c8a99f5283c376064ff97b570910e4601f7d26524f1a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "6e4cb0f07d9c2a3f2650c8a99f5283c376064ff97b570910e4601f7d26524f1a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6e4cb0f07d9c2a3f2650c8a99f5283c376064ff97b570910e4601f7d26524f1a", kill_on_drop: false }` [INFO] [stdout] 6e4cb0f07d9c2a3f2650c8a99f5283c376064ff97b570910e4601f7d26524f1a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=allow" "-e" "RUSTDOCFLAGS=--cap-lints=allow" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:beeedbb442662e57d416641ecc3200b38e573c25b057896194468d05594dd835" "/opt/rustwide/cargo-home/bin/cargo" "+dae34b759e282c069aa28752564694effd121a63" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 983360dae6cd929ab1a561eeb18b2152591851696a4b8caf1db260d3659bbb6f [INFO] running `Command { std: "docker" "start" "-a" "983360dae6cd929ab1a561eeb18b2152591851696a4b8caf1db260d3659bbb6f", kill_on_drop: false }` [INFO] [stderr] Copying to /tmp/fixit [INFO] [stderr] Running `cargo fix --edition` [INFO] [stderr] Migrating Cargo.toml from 2021 edition to 2024 [INFO] [stderr] Fixed Cargo.toml (1 fix) [INFO] [stderr] warning: file `/tmp/fixit/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] [stderr] Compiling libc v0.2.147 [INFO] [stderr] Compiling proc-macro2 v1.0.63 [INFO] [stderr] Compiling unicode-ident v1.0.9 [INFO] [stderr] Compiling quote v1.0.29 [INFO] [stderr] Compiling pkg-config v0.3.27 [INFO] [stderr] Compiling memchr v2.5.0 [INFO] [stderr] Compiling libm v0.2.7 [INFO] [stderr] Compiling crossbeam-utils v0.8.16 [INFO] [stderr] Compiling rustversion v1.0.12 [INFO] [stderr] Compiling serde v1.0.164 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Compiling matrixmultiply v0.3.7 [INFO] [stderr] Compiling memoffset v0.9.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling thiserror v1.0.40 [INFO] [stderr] Checking ppv-lite86 v0.2.17 [INFO] [stderr] Compiling paste v1.0.12 [INFO] [stderr] Checking bytemuck v1.13.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling lock_api v0.4.10 [INFO] [stderr] Checking safe_arch v0.7.0 [INFO] [stderr] Compiling crossbeam-epoch v0.9.15 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Compiling hashbrown v0.12.3 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Checking regex-syntax v0.7.2 [INFO] [stderr] Compiling os_str_bytes v6.5.1 [INFO] [stderr] Compiling typenum v1.16.0 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling termcolor v1.2.0 [INFO] [stderr] Checking aho-corasick v1.0.2 [INFO] [stderr] Checking wide v0.7.10 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling clap_lex v0.2.4 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling jobserver v0.1.26 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling syn v2.0.22 [INFO] [stderr] Checking getrandom v0.2.10 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Checking num_cpus v1.16.0 [INFO] [stderr] Compiling futures-core v0.3.28 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling textwrap v0.16.0 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling cc v1.0.79 [INFO] [stderr] Checking either v1.8.1 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Compiling once_cell v1.18.0 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking miniz_oxide v0.7.1 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling cmake v0.1.50 [INFO] [stderr] Compiling openssl-src v111.26.0+1.1.1u [INFO] [stderr] Checking num-complex v0.4.3 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking unicode-normalization v0.1.22 [INFO] [stderr] Checking unicode-bidi v0.3.13 [INFO] [stderr] Compiling log v0.4.19 [INFO] [stderr] Compiling anyhow v1.0.71 [INFO] [stderr] Checking simba v0.6.0 [INFO] [stderr] Compiling snap v1.1.0 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Compiling rayon-core v1.11.0 [INFO] [stderr] Checking percent-encoding v2.3.0 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Checking spin v0.9.8 [INFO] [stderr] Checking form_urlencoded v1.2.0 [INFO] [stderr] Compiling regex v1.8.4 [INFO] [stderr] Checking crossbeam-deque v0.8.3 [INFO] [stderr] Checking idna v0.4.0 [INFO] [stderr] Checking nanorand v0.7.0 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking crossbeam-channel v0.5.8 [INFO] [stderr] Compiling libz-sys v1.1.9 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling openssl-sys v0.9.90 [INFO] [stderr] Compiling curl-sys v0.4.63+curl-8.1.2 [INFO] [stderr] Compiling libdeflate-sys v0.12.0 [INFO] [stderr] Compiling hts-sys v2.1.1 [INFO] [stderr] Checking itoa v1.0.6 [INFO] [stderr] Checking safemem v0.3.3 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking ryu v1.0.13 [INFO] [stderr] Checking futures-sink v0.3.28 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking bytecount v0.6.3 [INFO] [stderr] Checking buffer-redux v1.0.0 [INFO] [stderr] Checking petgraph v0.6.3 [INFO] [stderr] Checking url v2.4.0 [INFO] [stderr] Checking bit-set v0.5.3 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stderr] Checking ordered-float v3.7.0 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking itertools v0.11.0 [INFO] [stderr] Checking core_affinity v0.8.0 [INFO] [stderr] Checking time v0.1.45 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Checking bytes v1.4.0 [INFO] [stderr] Checking iana-time-zone v0.1.57 [INFO] [stderr] Compiling env_logger v0.9.3 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking chrono v0.4.26 [INFO] [stderr] Checking rayon v1.7.0 [INFO] [stderr] Checking colored v2.0.0 [INFO] [stderr] Checking itertools v0.10.5 [INFO] [stderr] Checking natord v1.0.9 [INFO] [stderr] Checking bimap v0.6.3 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Checking libdeflater v0.12.0 [INFO] [stderr] Compiling clap_derive v3.2.25 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling strum_macros v0.24.3 [INFO] [stderr] Compiling enum-map-derive v0.6.0 [INFO] [stderr] Compiling calmio_filters v0.1.0 [INFO] [stderr] Compiling getset v0.1.2 [INFO] [stderr] Compiling serde_derive v1.0.164 [INFO] [stderr] Compiling thiserror-impl v1.0.40 [INFO] [stderr] Compiling pin-project-internal v1.1.2 [INFO] [stderr] Compiling strum_macros v0.25.0 [INFO] [stderr] Checking calm_io v0.1.1 [INFO] [stderr] Checking enum-map v1.1.1 [INFO] [stderr] Checking xz2 v0.1.7 [INFO] [stderr] Checking pin-project v1.1.2 [INFO] [stderr] Checking flume v0.10.14 [INFO] [stderr] Checking bio-types v1.0.0 [INFO] [stderr] Checking nalgebra v0.29.0 [INFO] [stderr] Compiling clap v3.2.25 [INFO] [stderr] Compiling clap_complete v3.2.5 [INFO] [stderr] Checking flate2 v1.0.26 [INFO] [stderr] Checking gzp v0.11.3 [INFO] [stderr] Checking needletail v0.5.1 [INFO] [stderr] Checking csv v1.2.2 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking multimap v0.8.3 [INFO] [stderr] Compiling rustybam v0.1.33 (/tmp/fixit) [INFO] [stderr] Migrating build.rs from 2021 edition to 2024 [INFO] [stderr] Checking statrs v0.16.0 [INFO] [stderr] Checking bio v1.3.1 [INFO] [stderr] Checking rust-htslib v0.44.1 [INFO] [stderr] Migrating src/lib.rs from 2021 edition to 2024 [INFO] [stderr] Migrating src/main.rs from 2021 edition to 2024 [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 31.97s [INFO] [stderr] Running `cargo check` to verify 2024 [INFO] [stderr] error: failed to parse manifest at `/tmp/fixit/Cargo.toml` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] feature `snap_default` includes `snap` which is neither a dependency nor another feature [INFO] [stderr] error: failed to check after updating to 2024 [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `cargo check --frozen --all --all-targets --message-format=json` (exit status: 101) [INFO] running `Command { std: "docker" "inspect" "983360dae6cd929ab1a561eeb18b2152591851696a4b8caf1db260d3659bbb6f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "983360dae6cd929ab1a561eeb18b2152591851696a4b8caf1db260d3659bbb6f", kill_on_drop: false }` [INFO] [stdout] 983360dae6cd929ab1a561eeb18b2152591851696a4b8caf1db260d3659bbb6f