[INFO] fetching crate minimap2-sys 0.1.18+minimap2.2.27... [INFO] checking minimap2-sys-0.1.18+minimap2.2.27 against master#91c0823ee63e793d990bb9fed898dc95b5d6db51 for pr-125384-2 [INFO] extracting crate minimap2-sys 0.1.18+minimap2.2.27 into /workspace/builds/worker-3-tc1/source [INFO] validating manifest of crates.io crate minimap2-sys 0.1.18+minimap2.2.27 on toolchain 91c0823ee63e793d990bb9fed898dc95b5d6db51 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+91c0823ee63e793d990bb9fed898dc95b5d6db51" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate minimap2-sys 0.1.18+minimap2.2.27 [INFO] finished tweaking crates.io crate minimap2-sys 0.1.18+minimap2.2.27 [INFO] tweaked toml for crates.io crate minimap2-sys 0.1.18+minimap2.2.27 written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+91c0823ee63e793d990bb9fed898dc95b5d6db51" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 47 packages to latest compatible versions [INFO] [stderr] Adding itertools v0.12.1 (latest: v0.13.0) [INFO] [stderr] Adding linux-raw-sys v0.4.14 (latest: v0.6.4) [INFO] [stderr] Adding which v4.4.2 (latest: v6.0.1) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+91c0823ee63e793d990bb9fed898dc95b5d6db51" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+91c0823ee63e793d990bb9fed898dc95b5d6db51" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 226acf82cdf51ec510ddbbb69f61f32ea8f9696a7d28b4fa5eed827a5b5fb814 [INFO] running `Command { std: "docker" "start" "-a" "226acf82cdf51ec510ddbbb69f61f32ea8f9696a7d28b4fa5eed827a5b5fb814", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "226acf82cdf51ec510ddbbb69f61f32ea8f9696a7d28b4fa5eed827a5b5fb814", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "226acf82cdf51ec510ddbbb69f61f32ea8f9696a7d28b4fa5eed827a5b5fb814", kill_on_drop: false }` [INFO] [stdout] 226acf82cdf51ec510ddbbb69f61f32ea8f9696a7d28b4fa5eed827a5b5fb814 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=allow" "-e" "RUSTDOCFLAGS=--cap-lints=allow" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+91c0823ee63e793d990bb9fed898dc95b5d6db51" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] bce169bb99fe3ec6070dfd76dbfab94fe65ae0480fd19c7d2f729601e56ff371 [INFO] running `Command { std: "docker" "start" "-a" "bce169bb99fe3ec6070dfd76dbfab94fe65ae0480fd19c7d2f729601e56ff371", kill_on_drop: false }` [INFO] [stderr] Compiling minimap2-sys v0.1.18+minimap2.2.27 (/opt/rustwide/workdir) [INFO] [stderr] Compiling libz-sys v1.1.18 [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/hit.c: In function 'mm_gen_regs': [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/hit.c:74:25: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 74 | r = (mm_reg1_t*)calloc(n_u, sizeof(mm_reg1_t)); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: In file included from minimap2/hit.c:2: [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: /usr/include/stdlib.h:543:14: note: in a call to allocation function 'calloc' declared here [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 543 | extern void *calloc (size_t __nmemb, size_t __size) [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c: In function 'mm_idx_load': [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:520:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 520 | fread(&l, 1, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:523:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 523 | fread(s->name, 1, l, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:526:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 526 | fread(&s->len, 4, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:536:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 536 | fread(&b->n, 4, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:538:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 538 | fread(b->p, 8, b->n, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:539:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 539 | fread(&size, 4, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:546:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 546 | fread(x, 8, 2, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:554:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 554 | fread(mi->S, 4, (sum_len + 7) / 8, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 9.90s [INFO] running `Command { std: "docker" "inspect" "bce169bb99fe3ec6070dfd76dbfab94fe65ae0480fd19c7d2f729601e56ff371", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bce169bb99fe3ec6070dfd76dbfab94fe65ae0480fd19c7d2f729601e56ff371", kill_on_drop: false }` [INFO] [stdout] bce169bb99fe3ec6070dfd76dbfab94fe65ae0480fd19c7d2f729601e56ff371 [INFO] checking minimap2-sys-0.1.18+minimap2.2.27 against try#519d6e23a6cb73c4d0f295f71ad37db8e95c54ab for pr-125384-2 [INFO] extracting crate minimap2-sys 0.1.18+minimap2.2.27 into /workspace/builds/worker-3-tc2/source [INFO] validating manifest of crates.io crate minimap2-sys 0.1.18+minimap2.2.27 on toolchain 519d6e23a6cb73c4d0f295f71ad37db8e95c54ab [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+519d6e23a6cb73c4d0f295f71ad37db8e95c54ab" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate minimap2-sys 0.1.18+minimap2.2.27 [INFO] finished tweaking crates.io crate minimap2-sys 0.1.18+minimap2.2.27 [INFO] tweaked toml for crates.io crate minimap2-sys 0.1.18+minimap2.2.27 written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+519d6e23a6cb73c4d0f295f71ad37db8e95c54ab" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 47 packages to latest compatible versions [INFO] [stderr] Adding itertools v0.12.1 (latest: v0.13.0) [INFO] [stderr] Adding linux-raw-sys v0.4.14 (latest: v0.6.4) [INFO] [stderr] Adding which v4.4.2 (latest: v6.0.1) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+519d6e23a6cb73c4d0f295f71ad37db8e95c54ab" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+519d6e23a6cb73c4d0f295f71ad37db8e95c54ab" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 309a6e1e75bfdd572c869375eb905ddcf124e7c572582c6d8897eca85e507d8d [INFO] running `Command { std: "docker" "start" "-a" "309a6e1e75bfdd572c869375eb905ddcf124e7c572582c6d8897eca85e507d8d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "309a6e1e75bfdd572c869375eb905ddcf124e7c572582c6d8897eca85e507d8d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "309a6e1e75bfdd572c869375eb905ddcf124e7c572582c6d8897eca85e507d8d", kill_on_drop: false }` [INFO] [stdout] 309a6e1e75bfdd572c869375eb905ddcf124e7c572582c6d8897eca85e507d8d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=allow" "-e" "RUSTDOCFLAGS=--cap-lints=allow" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+519d6e23a6cb73c4d0f295f71ad37db8e95c54ab" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 557b23c53b0940307cf0a511c1805b52bf2e374977f95ac7b2783d6114a33e14 [INFO] running `Command { std: "docker" "start" "-a" "557b23c53b0940307cf0a511c1805b52bf2e374977f95ac7b2783d6114a33e14", kill_on_drop: false }` [INFO] [stderr] Copying to /tmp/fixit [INFO] [stderr] Running `cargo fix --edition` [INFO] [stderr] Migrating Cargo.toml from 2021 edition to 2024 [INFO] [stderr] Fixed Cargo.toml (1 fix) [INFO] [stderr] Compiling libz-sys v1.1.18 [INFO] [stderr] Compiling minimap2-sys v0.1.18+minimap2.2.27 (/tmp/fixit) [INFO] [stderr] Migrating build.rs from 2021 edition to 2024 [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/hit.c: In function 'mm_gen_regs': [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/hit.c:74:25: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 74 | r = (mm_reg1_t*)calloc(n_u, sizeof(mm_reg1_t)); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: In file included from minimap2/hit.c:2: [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: /usr/include/stdlib.h:543:14: note: in a call to allocation function 'calloc' declared here [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 543 | extern void *calloc (size_t __nmemb, size_t __size) [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c: In function 'mm_idx_load': [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:520:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 520 | fread(&l, 1, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:523:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 523 | fread(s->name, 1, l, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:526:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 526 | fread(&s->len, 4, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:536:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 536 | fread(&b->n, 4, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:538:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 538 | fread(b->p, 8, b->n, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:539:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 539 | fread(&size, 4, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:546:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 546 | fread(x, 8, 2, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:554:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 554 | fread(mi->S, 4, (sum_len + 7) / 8, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] Migrating src/lib.rs from 2021 edition to 2024 [INFO] [stderr] Fixed src/bindings.rs (2 fixes) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 10.83s [INFO] [stderr] Running `cargo check` to verify 2024 [INFO] [stderr] Compiling minimap2-sys v0.1.18+minimap2.2.27 (/tmp/fixit) [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/hit.c: In function 'mm_gen_regs': [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/hit.c:74:25: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 74 | r = (mm_reg1_t*)calloc(n_u, sizeof(mm_reg1_t)); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: In file included from minimap2/hit.c:2: [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: /usr/include/stdlib.h:543:14: note: in a call to allocation function 'calloc' declared here [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 543 | extern void *calloc (size_t __nmemb, size_t __size) [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c: In function 'mm_idx_load': [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:520:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 520 | fread(&l, 1, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:523:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 523 | fread(s->name, 1, l, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:526:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 526 | fread(&s->len, 4, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:536:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 536 | fread(&b->n, 4, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:538:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 538 | fread(b->p, 8, b->n, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:539:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 539 | fread(&size, 4, 1, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:546:25: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 546 | fread(x, 8, 2, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~ [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: minimap2/index.c:554:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: 554 | fread(mi->S, 4, (sum_len + 7) / 8, fp); [INFO] [stderr] warning: minimap2-sys@0.1.18+minimap2.2.27: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 9.38s [INFO] running `Command { std: "docker" "inspect" "557b23c53b0940307cf0a511c1805b52bf2e374977f95ac7b2783d6114a33e14", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "557b23c53b0940307cf0a511c1805b52bf2e374977f95ac7b2783d6114a33e14", kill_on_drop: false }` [INFO] [stdout] 557b23c53b0940307cf0a511c1805b52bf2e374977f95ac7b2783d6114a33e14