[INFO] fetching crate bio-seq 0.12.4...
[INFO] testing bio-seq-0.12.4 against master#1871252fc8bb672d40787e67404e6eaae7059369 for pr-125151
[INFO] extracting crate bio-seq 0.12.4 into /workspace/builds/worker-7-tc1/source
[INFO] validating manifest of crates.io crate bio-seq 0.12.4 on toolchain 1871252fc8bb672d40787e67404e6eaae7059369
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1871252fc8bb672d40787e67404e6eaae7059369" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate bio-seq 0.12.4
[INFO] finished tweaking crates.io crate bio-seq 0.12.4
[INFO] tweaked toml for crates.io crate bio-seq 0.12.4 written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1871252fc8bb672d40787e67404e6eaae7059369" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 13 packages to latest compatible versions
[INFO] [stderr]       Adding radium v0.7.0 (latest: v1.1.0)
[INFO] [stderr]       Adding wyz v0.5.1 (latest: v0.6.1)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1871252fc8bb672d40787e67404e6eaae7059369" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded bio-seq-derive v2.0.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:59a85a07ab18ca8720692f8e61effa1c651d9e2ca591e072c2b212bb91a6b8b5" "/opt/rustwide/cargo-home/bin/cargo" "+1871252fc8bb672d40787e67404e6eaae7059369" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 1df046d75efca8acb1445f79113f1b79f277721a768a75824947dbb6bdb12404
[INFO] running `Command { std: "docker" "start" "-a" "1df046d75efca8acb1445f79113f1b79f277721a768a75824947dbb6bdb12404", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "1df046d75efca8acb1445f79113f1b79f277721a768a75824947dbb6bdb12404", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1df046d75efca8acb1445f79113f1b79f277721a768a75824947dbb6bdb12404", kill_on_drop: false }`
[INFO] [stdout] 1df046d75efca8acb1445f79113f1b79f277721a768a75824947dbb6bdb12404
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:59a85a07ab18ca8720692f8e61effa1c651d9e2ca591e072c2b212bb91a6b8b5" "/opt/rustwide/cargo-home/bin/cargo" "+1871252fc8bb672d40787e67404e6eaae7059369" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0c5c33def752710fcac671f6f6a0fe6bfeeb9f9e4b3b0cd0c40545f7649c900f
[INFO] running `Command { std: "docker" "start" "-a" "0c5c33def752710fcac671f6f6a0fe6bfeeb9f9e4b3b0cd0c40545f7649c900f", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.83
[INFO] [stderr]    Compiling radium v0.7.0
[INFO] [stderr]    Compiling tap v1.0.1
[INFO] [stderr]    Compiling funty v2.0.0
[INFO] [stderr]    Compiling wyz v0.5.1
[INFO] [stderr]    Compiling bitvec v1.0.1
[INFO] [stderr]    Compiling quote v1.0.36
[INFO] [stderr]    Compiling syn v2.0.66
[INFO] [stderr]    Compiling bio-seq-derive v2.0.2
[INFO] [stderr]    Compiling bio-seq v0.12.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 9.93s
[INFO] running `Command { std: "docker" "inspect" "0c5c33def752710fcac671f6f6a0fe6bfeeb9f9e4b3b0cd0c40545f7649c900f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0c5c33def752710fcac671f6f6a0fe6bfeeb9f9e4b3b0cd0c40545f7649c900f", kill_on_drop: false }`
[INFO] [stdout] 0c5c33def752710fcac671f6f6a0fe6bfeeb9f9e4b3b0cd0c40545f7649c900f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:59a85a07ab18ca8720692f8e61effa1c651d9e2ca591e072c2b212bb91a6b8b5" "/opt/rustwide/cargo-home/bin/cargo" "+1871252fc8bb672d40787e67404e6eaae7059369" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b2d800550ca75e43c6c98416ff75b5f1596bad41ae139c4ab1a3f02a41e8badd
[INFO] running `Command { std: "docker" "start" "-a" "b2d800550ca75e43c6c98416ff75b5f1596bad41ae139c4ab1a3f02a41e8badd", kill_on_drop: false }`
[INFO] [stderr]    Compiling bio-seq v0.12.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 2.27s
[INFO] running `Command { std: "docker" "inspect" "b2d800550ca75e43c6c98416ff75b5f1596bad41ae139c4ab1a3f02a41e8badd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b2d800550ca75e43c6c98416ff75b5f1596bad41ae139c4ab1a3f02a41e8badd", kill_on_drop: false }`
[INFO] [stdout] b2d800550ca75e43c6c98416ff75b5f1596bad41ae139c4ab1a3f02a41e8badd
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:59a85a07ab18ca8720692f8e61effa1c651d9e2ca591e072c2b212bb91a6b8b5" "/opt/rustwide/cargo-home/bin/cargo" "+1871252fc8bb672d40787e67404e6eaae7059369" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] f4c4663848ebccc8b887b4ab7e59d22adf085882e382a08cb3b60aa485934e0d
[INFO] running `Command { std: "docker" "start" "-a" "f4c4663848ebccc8b887b4ab7e59d22adf085882e382a08cb3b60aa485934e0d", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.03s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/bio_seq-362135d24efe7280)
[INFO] [stdout] 
[INFO] [stdout] running 76 tests
[INFO] [stdout] test codec::dna::tests::dna_kmer_complement ... ok
[INFO] [stdout] test codec::dna::tests::dna_kmer_equality ... ok
[INFO] [stdout] test kmer::tests::amino_kmer_iter ... ok
[INFO] [stdout] test kmer::tests::amino_kmer_to_usize ... ok
[INFO] [stdout] test kmer::tests::big_kmer_shiftl ... ok
[INFO] [stdout] test codec::text::tests::test_text_dna_encoding ... ok
[INFO] [stdout] test codec::dna::tests::dna_kmer_macro ... ok
[INFO] [stdout] test kmer::tests::eq_functions ... ok
[INFO] [stdout] test codec::tests::dna_to_iupac ... ok
[INFO] [stdout] test kmer::tests::kmer_to_usize ... ok
[INFO] [stdout] test kmer::tests::pushl_test ... ok
[INFO] [stdout] test kmer::tests::valid_k_check ... ok
[INFO] [stdout] test kmer::tests::pushr_test ... ok
[INFO] [stdout] test kmer::tests::kmer_revcomp ... ok
[INFO] [stdout] test kmer::tests::kmer_iter ... ok
[INFO] [stdout] test kmer::tests::big_kmer_shiftr ... ok
[INFO] [stdout] test seq::iterators::tests::iterators ... ok
[INFO] [stdout] test seq::iterators::tests::chunks ... ok
[INFO] [stdout] test seq::iterators::tests::test_chain ... ok
[INFO] [stdout] test seq::iterators::tests::rev_iter ... ok
[INFO] [stdout] test seq::tests::invalid_string_to_seq ... ok
[INFO] [stdout] test seq::iterators::tests::windows ... ok
[INFO] [stdout] test seq::tests::from_slice ... ok
[INFO] [stdout] test seq::tests::slice_index_comparisions ... ok
[INFO] [stdout] test seq::tests::slice_index_ranges ... ok
[INFO] [stdout] test seq::tests::seqslice_to_string ... ok
[INFO] [stdout] test seq::iterators::tests::seq_iter ... ok
[INFO] [stdout] test seq::tests::slice_indexing ... ok
[INFO] [stdout] test seq::tests::slice_nth ... ok
[INFO] [stdout] test seq::tests::slice_rangeto_and_full ... ok
[INFO] [stdout] test seq::tests::seq_to_string ... ok
[INFO] [stdout] test seq::tests::string_to_seq ... ok
[INFO] [stdout] test seq::tests::test_asref ... ok
[INFO] [stdout] test seq::tests::test_bit_order ... ok
[INFO] [stdout] test seq::tests::test_clone ... ok
[INFO] [stdout] test seq::tests::test_borrow ... ok
[INFO] [stdout] test seq::tests::test_extend ... ok
[INFO] [stdout] test seq::tests::test_extend_amino ... ok
[INFO] [stdout] test seq::tests::test_push ... ok
[INFO] [stdout] test seq::tests::test_revcomp ... ok
[INFO] [stdout] test seq::tests::test_revcomp_idempotence ... ok
[INFO] [stdout] test seq::tests::test_revcomp_mismatched_sizes ... ok
[INFO] [stdout] test seq::tests::test_from_iter ... ok
[INFO] [stdout] test seq::tests::test_deref ... ok
[INFO] [stdout] test seq::tests::test_eqs ... ok
[INFO] [stdout] test kmer::tests::invalid_k_check_amino - should panic ... ok
[INFO] [stdout] test kmer::tests::invalid_k_check_dna - should panic ... ok
[INFO] [stdout] test seq::tests::invalid_seqslice_to_string - should panic ... ok
[INFO] [stdout] test kmer::tests::invalid_k_check - should panic ... ok
[INFO] [stdout] test seq::tests::test_seq_slice_hash ... ok
[INFO] [stdout] test seq::tests::test_seq_eq_and_hash ... ok
[INFO] [stdout] test tests::iterate_bases ... ok
[INFO] [stdout] test tests::iterate_kmer4 ... ok
[INFO] [stdout] test tests::iterate_kmer8 ... ok
[INFO] [stdout] test tests::iterate_kmers ... ok
[INFO] [stdout] test tests::iupac_bitwise_ops ... ok
[INFO] [stdout] test tests::from_string ... ok
[INFO] [stdout] test seq::tests::test_to_owned ... ok
[INFO] [stdout] test tests::colexicographic_order ... ok
[INFO] [stdout] test tests::test_display_dna ... ok
[INFO] [stdout] test tests::rev_seq ... ok
[INFO] [stdout] test tests::test_display_aminos ... ok
[INFO] [stdout] test translation::standard::tests::alternate_codons ... ok
[INFO] [stdout] test tests::nth_chars ... ok
[INFO] [stdout] test translation::standard::tests::dna_to_amino ... ok
[INFO] [stdout] test translation::standard::tests::test_debruin_sequence ... ok
[INFO] [stdout] test translation::standard::tests::ambiguous_amino_to_iupac ... ok
[INFO] [stdout] test translation::standard::tests::iupac_to_amino_errors ... ok
[INFO] [stdout] test seq::tests::test_seq_slice_eq ... ok
[INFO] [stdout] test tests::alt_repr ... ok
[INFO] [stdout] test tests::into_usize ... ok
[INFO] [stdout] test translation::standard::tests::test_iupac_aminos ... ok
[INFO] [stdout] test translation::standard::tests::test_iupac_ambiguous_codons ... ok
[INFO] [stdout] test translation::tests::custom_codon_table ... ok
[INFO] [stdout] test translation::tests::mitochondrial_coding_table ... ok
[INFO] [stderr]    Doc-tests bio_seq
[INFO] [stdout] test translation::standard::tests::test_iupac_codons ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 76 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.15s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 17 tests
[INFO] [stdout] test src/codec/mod.rs - codec (line 18) ... ignored
[INFO] [stdout] test src/codec/mod.rs - codec::Complement (line 57) ... ok
[INFO] [stdout] test src/codec/iupac.rs - codec::iupac (line 26) ... ok
[INFO] [stdout] test src/lib.rs - (line 27) ... ok
[INFO] [stdout] test src/kmer.rs - kmer::Kmer<A,K> (line 206) ... ok
[INFO] [stdout] test src/codec/mod.rs - codec (line 7) ... ok
[INFO] [stdout] test src/kmer.rs - kmer (line 12) ... ok
[INFO] [stdout] test src/kmer.rs - kmer::Kmer<A,K>::pushr (line 70) ... ok
[INFO] [stdout] test src/codec/iupac.rs - codec::iupac (line 38) ... ok
[INFO] [stdout] test src/seq/iterators.rs - seq::iterators::SeqSlice<A>::chunks (line 83) ... ok
[INFO] [stdout] test src/seq/iterators.rs - seq::iterators::SeqSlice<A>::windows (line 60) ... ok
[INFO] [stdout] test src/seq/mod.rs - seq::Seq<A> (line 420) ... ok
[INFO] [stdout] test src/seq/mod.rs - seq::Seq<A> (line 356) ... ok
[INFO] [stdout] test src/seq/mod.rs - seq::Seq<A> (line 340) ... ok
[INFO] [stdout] test src/seq/mod.rs - seq::SeqSlice<A> (line 397) ... ok
[INFO] [stdout] test src/seq/mod.rs - seq (line 10) ... ok
[INFO] [stdout] test src/seq/mod.rs - seq::Seq<A> (line 377) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 16 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out; finished in 3.18s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "f4c4663848ebccc8b887b4ab7e59d22adf085882e382a08cb3b60aa485934e0d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f4c4663848ebccc8b887b4ab7e59d22adf085882e382a08cb3b60aa485934e0d", kill_on_drop: false }`
[INFO] [stdout] f4c4663848ebccc8b887b4ab7e59d22adf085882e382a08cb3b60aa485934e0d
