[INFO] fetching crate hgvs 0.14.1... [INFO] checking hgvs-0.14.1 against master#7c4ac0603e9ee5295bc802c90575391288a69a8a for pr-124728 [INFO] extracting crate hgvs 0.14.1 into /workspace/builds/worker-2-tc1/source [INFO] validating manifest of crates.io crate hgvs 0.14.1 on toolchain 7c4ac0603e9ee5295bc802c90575391288a69a8a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+7c4ac0603e9ee5295bc802c90575391288a69a8a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate hgvs 0.14.1 [INFO] finished tweaking crates.io crate hgvs 0.14.1 [INFO] tweaked toml for crates.io crate hgvs 0.14.1 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+7c4ac0603e9ee5295bc802c90575391288a69a8a" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 279 packages to latest compatible versions [INFO] [stderr] Adding addr2line v0.21.0 (latest: v0.22.0) [INFO] [stderr] Adding anes v0.1.6 (latest: v0.2.0) [INFO] [stderr] Adding base64 v0.21.7 (latest: v0.22.1) [INFO] [stderr] Adding bitflags v1.3.2 (latest: v2.5.0) [INFO] [stderr] Adding derive-new v0.5.9 (latest: v0.6.0) [INFO] [stderr] Adding encode_unicode v0.3.6 (latest: v1.0.0) [INFO] [stderr] Adding env_logger v0.10.2 (latest: v0.11.3) [INFO] [stderr] Adding fallible-iterator v0.2.0 (latest: v0.3.0) [INFO] [stderr] Adding fixedbitset v0.4.2 (latest: v0.5.7) [INFO] [stderr] Adding generic-array v0.14.7 (latest: v1.0.0) [INFO] [stderr] Adding gimli v0.28.1 (latest: v0.29.0) [INFO] [stderr] Adding hashlink v0.8.4 (latest: v0.9.1) [INFO] [stderr] Adding heck v0.4.1 (latest: v0.5.0) [INFO] [stderr] Adding itertools v0.10.5 (latest: v0.12.1) [INFO] [stderr] Adding itertools v0.11.0 (latest: v0.12.1) [INFO] [stderr] Adding libsqlite3-sys v0.26.0 (latest: v0.28.0) [INFO] [stderr] Adding multimap v0.9.1 (latest: v0.10.0) [INFO] [stderr] Adding nalgebra v0.29.0 (latest: v0.32.5) [INFO] [stderr] Adding nalgebra-macros v0.1.0 (latest: v0.2.1) [INFO] [stderr] Adding noodles-bgzf v0.25.0 (latest: v0.29.0) [INFO] [stderr] Adding noodles-core v0.12.0 (latest: v0.15.0) [INFO] [stderr] Adding noodles-fasta v0.30.0 (latest: v0.37.0) [INFO] [stderr] Adding nu-ansi-term v0.46.0 (latest: v0.50.0) [INFO] [stderr] Adding object v0.32.2 (latest: v0.35.0) [INFO] [stderr] Adding ordered-float v3.9.2 (latest: v4.2.0) [INFO] [stderr] Adding quick_cache v0.4.2 (latest: v0.5.1) [INFO] [stderr] Adding redox_syscall v0.4.1 (latest: v0.5.1) [INFO] [stderr] Adding regex-automata v0.1.10 (latest: v0.4.6) [INFO] [stderr] Adding regex-syntax v0.6.29 (latest: v0.8.3) [INFO] [stderr] Adding rstest v0.18.2 (latest: v0.19.0) [INFO] [stderr] Adding rstest_macros v0.18.2 (latest: v0.19.0) [INFO] [stderr] Adding rusqlite v0.29.0 (latest: v0.31.0) [INFO] [stderr] Adding rustc_version v0.1.7 (latest: v0.4.0) [INFO] [stderr] Adding semver v0.1.20 (latest: v1.0.23) [INFO] [stderr] Adding seqrepo v0.9.0 (latest: v0.10.1) [INFO] [stderr] Adding simba v0.6.0 (latest: v0.8.1) [INFO] [stderr] Adding siphasher v0.3.11 (latest: v1.0.1) [INFO] [stderr] Adding strum v0.25.0 (latest: v0.26.2) [INFO] [stderr] Adding strum_macros v0.25.3 (latest: v0.26.2) [INFO] [stderr] Adding syn v1.0.109 (latest: v2.0.63) [INFO] [stderr] Adding wasi v0.11.0+wasi-snapshot-preview1 (latest: v0.13.0+wasi-0.2.0) [INFO] [stderr] Adding windows-core v0.52.0 (latest: v0.56.0) [INFO] [stderr] Adding windows-sys v0.48.0 (latest: v0.52.0) [INFO] [stderr] Adding windows-targets v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_aarch64_gnullvm v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_aarch64_msvc v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_i686_gnu v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_i686_msvc v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_x86_64_gnu v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_x86_64_gnullvm v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_x86_64_msvc v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding yansi v0.5.1 (latest: v1.0.1) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+7c4ac0603e9ee5295bc802c90575391288a69a8a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded env_filter v0.1.0 [INFO] [stderr] Downloaded test-log-macros v0.2.16 [INFO] [stderr] Downloaded test-log v0.2.16 [INFO] [stderr] Downloaded hashlink v0.8.4 [INFO] [stderr] Downloaded env_logger v0.11.3 [INFO] [stderr] Downloaded seqrepo v0.9.0 [INFO] [stderr] Downloaded rusqlite v0.29.0 [INFO] [stderr] Downloaded strum v0.25.0 [INFO] [stderr] Downloaded ciborium-io v0.2.2 [INFO] [stderr] Downloaded half v2.4.1 [INFO] [stderr] Downloaded enum-map v2.7.3 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded ordered-float v3.9.2 [INFO] [stderr] Downloaded base16ct v0.2.0 [INFO] [stderr] Downloaded derive-new v0.5.9 [INFO] [stderr] Downloaded ndarray v0.15.6 [INFO] [stderr] Downloaded wide v0.7.19 [INFO] [stderr] Downloaded petgraph v0.6.5 [INFO] [stderr] Downloaded finl_unicode v1.2.0 [INFO] [stderr] Downloaded nalgebra v0.29.0 [INFO] [stderr] Downloaded statrs v0.16.0 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] [stderr] Downloaded biocommons-bioutils v0.1.4 [INFO] [stderr] Downloaded insta v1.38.0 [INFO] [stderr] Downloaded allocator-api2 v0.2.18 [INFO] [stderr] Downloaded bio-types v1.0.1 [INFO] [stderr] Downloaded feature-probe v0.1.1 [INFO] [stderr] Downloaded bv v0.11.1 [INFO] [stderr] Downloaded bytecount v0.6.8 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded multimap v0.9.1 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded bytemuck v1.16.0 [INFO] [stderr] Downloaded simba v0.6.0 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded libsqlite3-sys v0.26.0 [INFO] [stderr] Downloaded enum-map-derive v0.17.0 [INFO] [stderr] Downloaded encode_unicode v0.3.6 [INFO] [stderr] Downloaded console v0.15.8 [INFO] [stderr] Downloaded similar v2.5.0 [INFO] [stderr] Downloaded md-5 v0.10.6 [INFO] [stderr] Downloaded stringprep v0.1.4 [INFO] [stderr] Downloaded tokio-postgres v0.7.10 [INFO] [stderr] Downloaded postgres v0.19.7 [INFO] [stderr] Downloaded quick_cache v0.4.2 [INFO] [stderr] Downloaded futures-timer v3.0.3 [INFO] [stderr] Downloaded rstest_macros v0.18.2 [INFO] [stderr] Downloaded rstest v0.18.2 [INFO] [stderr] Downloaded fixedbitset v0.4.2 [INFO] [stderr] Downloaded strum_macros v0.25.3 [INFO] [stderr] Downloaded ciborium-ll v0.2.2 [INFO] [stderr] Downloaded ciborium v0.2.2 [INFO] [stderr] Downloaded linked-hash-map v0.5.6 [INFO] [stderr] Downloaded siphasher v0.3.11 [INFO] [stderr] Downloaded phf_shared v0.11.2 [INFO] [stderr] Downloaded postgres-types v0.2.6 [INFO] [stderr] Downloaded whoami v1.5.1 [INFO] [stderr] Downloaded relative-path v1.9.3 [INFO] [stderr] Downloaded noodles-bgzf v0.25.0 [INFO] [stderr] Downloaded noodles-core v0.12.0 [INFO] [stderr] Downloaded phf v0.11.2 [INFO] [stderr] Downloaded postgres-protocol v0.6.6 [INFO] [stderr] Downloaded wasite v0.1.0 [INFO] [stderr] Downloaded rustc-hash v1.1.0 [INFO] [stderr] Downloaded noodles-fasta v0.30.0 [INFO] [stderr] Downloaded fallible-streaming-iterator v0.1.9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:99613afd962a8cfa530ec1899472a458bd015a1ab0af876cf7eb06f6006d81ea" "/opt/rustwide/cargo-home/bin/cargo" "+7c4ac0603e9ee5295bc802c90575391288a69a8a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 0c3d0f9276995919c5928fd56de47893e2bb89546406cba595cb921416447ddf [INFO] running `Command { std: "docker" "start" "-a" "0c3d0f9276995919c5928fd56de47893e2bb89546406cba595cb921416447ddf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "0c3d0f9276995919c5928fd56de47893e2bb89546406cba595cb921416447ddf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0c3d0f9276995919c5928fd56de47893e2bb89546406cba595cb921416447ddf", kill_on_drop: false }` [INFO] [stdout] 0c3d0f9276995919c5928fd56de47893e2bb89546406cba595cb921416447ddf [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:99613afd962a8cfa530ec1899472a458bd015a1ab0af876cf7eb06f6006d81ea" "/opt/rustwide/cargo-home/bin/cargo" "+7c4ac0603e9ee5295bc802c90575391288a69a8a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ecd8b41c21b71eb934318f2a68e111c0dde58abe2c9655125b0de1234a64fb36 [INFO] running `Command { std: "docker" "start" "-a" "ecd8b41c21b71eb934318f2a68e111c0dde58abe2c9655125b0de1234a64fb36", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.82 [INFO] [stderr] Compiling serde v1.0.201 [INFO] [stderr] Checking ppv-lite86 v0.2.17 [INFO] [stderr] Checking zerocopy v0.7.34 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Checking allocator-api2 v0.2.18 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking futures-sink v0.3.30 [INFO] [stderr] Checking subtle v2.5.0 [INFO] [stderr] Checking futures-core v0.3.30 [INFO] [stderr] Checking getrandom v0.2.15 [INFO] [stderr] Compiling crc32fast v1.4.0 [INFO] [stderr] Checking smallvec v1.13.2 [INFO] [stderr] Compiling matrixmultiply v0.3.8 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Checking regex-syntax v0.8.3 [INFO] [stderr] Checking bytemuck v1.16.0 [INFO] [stderr] Checking futures-channel v0.3.30 [INFO] [stderr] Checking log v0.4.21 [INFO] [stderr] Checking digest v0.10.7 [INFO] [stderr] Checking fallible-iterator v0.2.0 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking either v1.11.0 [INFO] [stderr] Compiling semver v1.0.23 [INFO] [stderr] Checking miniz_oxide v0.7.2 [INFO] [stderr] Checking safe_arch v0.7.1 [INFO] [stderr] Checking unicode-normalization v0.1.23 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Checking cpufeatures v0.2.12 [INFO] [stderr] Checking unicode-bidi v0.3.15 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking finl_unicode v1.2.0 [INFO] [stderr] Checking anstyle v1.0.7 [INFO] [stderr] Checking scopeguard v1.2.0 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Compiling pkg-config v0.3.30 [INFO] [stderr] Compiling serde_json v1.0.117 [INFO] [stderr] Checking iana-time-zone v0.1.60 [INFO] [stderr] Checking hashbrown v0.14.5 [INFO] [stderr] Compiling quote v1.0.36 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking flate2 v1.0.30 [INFO] [stderr] Checking wide v0.7.19 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking lock_api v0.4.12 [INFO] [stderr] Checking chrono v0.4.38 [INFO] [stderr] Checking md-5 v0.10.6 [INFO] [stderr] Checking stringprep v0.1.4 [INFO] [stderr] Checking sha2 v0.10.8 [INFO] [stderr] Checking hmac v0.12.1 [INFO] [stderr] Checking parking_lot_core v0.9.10 [INFO] [stderr] Compiling syn v2.0.63 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking socket2 v0.5.7 [INFO] [stderr] Checking mio v0.8.11 [INFO] [stderr] Checking base64 v0.21.7 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling memchr v2.7.2 [INFO] [stderr] Checking siphasher v0.3.11 [INFO] [stderr] Checking parking_lot v0.12.2 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling rustc_version v0.4.0 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking num-rational v0.4.2 [INFO] [stderr] Checking tokio v1.37.0 [INFO] [stderr] Checking phf_shared v0.11.2 [INFO] [stderr] Checking crossbeam-channel v0.5.12 [INFO] [stderr] Checking utf8parse v0.2.1 [INFO] [stderr] Checking postgres-protocol v0.6.6 [INFO] [stderr] Compiling libsqlite3-sys v0.26.0 [INFO] [stderr] Compiling anyhow v1.0.83 [INFO] [stderr] Checking anstyle-parse v0.2.4 [INFO] [stderr] Compiling rstest_macros v0.18.2 [INFO] [stderr] Checking phf v0.11.2 [INFO] [stderr] Checking regex-automata v0.4.6 [INFO] [stderr] Checking hashlink v0.8.4 [INFO] [stderr] Checking tracing-core v0.1.32 [INFO] [stderr] Checking csv-core v0.1.11 [INFO] [stderr] Checking half v2.4.1 [INFO] [stderr] Checking noodles-bgzf v0.25.0 [INFO] [stderr] Checking fixedbitset v0.4.2 [INFO] [stderr] Checking colorchoice v1.0.1 [INFO] [stderr] Checking bitflags v2.5.0 [INFO] [stderr] Checking whoami v1.5.1 [INFO] [stderr] Checking anstyle-query v1.0.3 [INFO] [stderr] Checking postgres-types v0.2.6 [INFO] [stderr] Checking plotters-backend v0.3.5 [INFO] [stderr] Checking noodles-core v0.12.0 [INFO] [stderr] Checking is_terminal_polyfill v1.70.0 [INFO] [stderr] Checking ciborium-io v0.2.2 [INFO] [stderr] Checking clap_lex v0.7.0 [INFO] [stderr] Checking fallible-streaming-iterator v0.1.9 [INFO] [stderr] Checking anstream v0.6.14 [INFO] [stderr] Checking simba v0.6.0 [INFO] [stderr] Checking noodles-fasta v0.30.0 [INFO] [stderr] Checking ciborium-ll v0.2.2 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stderr] Checking itertools v0.11.0 [INFO] [stderr] Checking clap_builder v4.5.2 [INFO] [stderr] Checking plotters-svg v0.3.5 [INFO] [stderr] Checking rusqlite v0.29.0 [INFO] [stderr] Checking itertools v0.10.5 [INFO] [stderr] Checking env_filter v0.1.0 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking ordered-float v3.9.2 [INFO] [stderr] Checking is-terminal v0.4.12 [INFO] [stderr] Compiling relative-path v1.9.3 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking minimal-lexical v0.2.1 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking cast v0.3.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking strum v0.25.0 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Checking bytecount v0.6.8 [INFO] [stderr] Checking nom v7.1.3 [INFO] [stderr] Checking walkdir v2.5.0 [INFO] [stderr] Checking env_logger v0.11.3 [INFO] [stderr] Checking plotters v0.3.5 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Checking quick_cache v0.4.2 [INFO] [stderr] Checking console v0.15.8 [INFO] [stderr] Checking yansi v0.5.1 [INFO] [stderr] Checking criterion-plot v0.5.0 [INFO] [stderr] error: could not compile `syn` (lib) [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/7c4ac0603e9ee5295bc802c90575391288a69a8a/bin/rustc --crate-name syn --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-6f17d22bba15001f/syn-2.0.63/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="clone-impls"' --cfg 'feature="default"' --cfg 'feature="derive"' --cfg 'feature="extra-traits"' --cfg 'feature="full"' --cfg 'feature="parsing"' --cfg 'feature="printing"' --cfg 'feature="proc-macro"' --cfg 'feature="visit"' --cfg 'feature="visit-mut"' --check-cfg 'cfg(docsrs)' --check-cfg 'cfg(feature, values("clone-impls", "default", "derive", "extra-traits", "fold", "full", "parsing", "printing", "proc-macro", "test", "visit", "visit-mut"))' -C metadata=173878a0e671cdf7 -C extra-filename=-173878a0e671cdf7 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-860daa60fdca5d2f.rmeta --extern quote=/opt/rustwide/target/debug/deps/libquote-d1d43cb6c3e08ebd.rmeta --extern unicode_ident=/opt/rustwide/target/debug/deps/libunicode_ident-7b828347d8713ecd.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill) [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] running `Command { std: "docker" "inspect" "ecd8b41c21b71eb934318f2a68e111c0dde58abe2c9655125b0de1234a64fb36", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ecd8b41c21b71eb934318f2a68e111c0dde58abe2c9655125b0de1234a64fb36", kill_on_drop: false }` [INFO] [stdout] ecd8b41c21b71eb934318f2a68e111c0dde58abe2c9655125b0de1234a64fb36 [INFO] checking hgvs-0.14.1 against try#98ebbae35138252af77610c20ea5a5e8bf68d639 for pr-124728 [INFO] extracting crate hgvs 0.14.1 into /workspace/builds/worker-2-tc2/source [INFO] validating manifest of crates.io crate hgvs 0.14.1 on toolchain 98ebbae35138252af77610c20ea5a5e8bf68d639 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+98ebbae35138252af77610c20ea5a5e8bf68d639" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate hgvs 0.14.1 [INFO] finished tweaking crates.io crate hgvs 0.14.1 [INFO] tweaked toml for crates.io crate hgvs 0.14.1 written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+98ebbae35138252af77610c20ea5a5e8bf68d639" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Locking 279 packages to latest compatible versions [INFO] [stderr] Adding addr2line v0.21.0 (latest: v0.22.0) [INFO] [stderr] Adding anes v0.1.6 (latest: v0.2.0) [INFO] [stderr] Adding base64 v0.21.7 (latest: v0.22.1) [INFO] [stderr] Adding bitflags v1.3.2 (latest: v2.5.0) [INFO] [stderr] Adding derive-new v0.5.9 (latest: v0.6.0) [INFO] [stderr] Adding encode_unicode v0.3.6 (latest: v1.0.0) [INFO] [stderr] Adding env_logger v0.10.2 (latest: v0.11.3) [INFO] [stderr] Adding fallible-iterator v0.2.0 (latest: v0.3.0) [INFO] [stderr] Adding fixedbitset v0.4.2 (latest: v0.5.7) [INFO] [stderr] Adding generic-array v0.14.7 (latest: v1.0.0) [INFO] [stderr] Adding gimli v0.28.1 (latest: v0.29.0) [INFO] [stderr] Adding hashlink v0.8.4 (latest: v0.9.1) [INFO] [stderr] Adding heck v0.4.1 (latest: v0.5.0) [INFO] [stderr] Adding itertools v0.10.5 (latest: v0.12.1) [INFO] [stderr] Adding itertools v0.11.0 (latest: v0.12.1) [INFO] [stderr] Adding libsqlite3-sys v0.26.0 (latest: v0.28.0) [INFO] [stderr] Adding multimap v0.9.1 (latest: v0.10.0) [INFO] [stderr] Adding nalgebra v0.29.0 (latest: v0.32.5) [INFO] [stderr] Adding nalgebra-macros v0.1.0 (latest: v0.2.1) [INFO] [stderr] Adding noodles-bgzf v0.25.0 (latest: v0.29.0) [INFO] [stderr] Adding noodles-core v0.12.0 (latest: v0.15.0) [INFO] [stderr] Adding noodles-fasta v0.30.0 (latest: v0.37.0) [INFO] [stderr] Adding nu-ansi-term v0.46.0 (latest: v0.50.0) [INFO] [stderr] Adding object v0.32.2 (latest: v0.35.0) [INFO] [stderr] Adding ordered-float v3.9.2 (latest: v4.2.0) [INFO] [stderr] Adding quick_cache v0.4.2 (latest: v0.5.1) [INFO] [stderr] Adding redox_syscall v0.4.1 (latest: v0.5.1) [INFO] [stderr] Adding regex-automata v0.1.10 (latest: v0.4.6) [INFO] [stderr] Adding regex-syntax v0.6.29 (latest: v0.8.3) [INFO] [stderr] Adding rstest v0.18.2 (latest: v0.19.0) [INFO] [stderr] Adding rstest_macros v0.18.2 (latest: v0.19.0) [INFO] [stderr] Adding rusqlite v0.29.0 (latest: v0.31.0) [INFO] [stderr] Adding rustc_version v0.1.7 (latest: v0.4.0) [INFO] [stderr] Adding semver v0.1.20 (latest: v1.0.23) [INFO] [stderr] Adding seqrepo v0.9.0 (latest: v0.10.1) [INFO] [stderr] Adding simba v0.6.0 (latest: v0.8.1) [INFO] [stderr] Adding siphasher v0.3.11 (latest: v1.0.1) [INFO] [stderr] Adding strum v0.25.0 (latest: v0.26.2) [INFO] [stderr] Adding strum_macros v0.25.3 (latest: v0.26.2) [INFO] [stderr] Adding syn v1.0.109 (latest: v2.0.63) [INFO] [stderr] Adding wasi v0.11.0+wasi-snapshot-preview1 (latest: v0.13.0+wasi-0.2.0) [INFO] [stderr] Adding windows-core v0.52.0 (latest: v0.56.0) [INFO] [stderr] Adding windows-sys v0.48.0 (latest: v0.52.0) [INFO] [stderr] Adding windows-targets v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_aarch64_gnullvm v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_aarch64_msvc v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_i686_gnu v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_i686_msvc v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_x86_64_gnu v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_x86_64_gnullvm v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding windows_x86_64_msvc v0.48.5 (latest: v0.52.5) [INFO] [stderr] Adding yansi v0.5.1 (latest: v1.0.1) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+98ebbae35138252af77610c20ea5a5e8bf68d639" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:99613afd962a8cfa530ec1899472a458bd015a1ab0af876cf7eb06f6006d81ea" "/opt/rustwide/cargo-home/bin/cargo" "+98ebbae35138252af77610c20ea5a5e8bf68d639" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 92491969b8ea7bbf2b5e158bca94d956f5a6a72c18a55d6096e29f9a80d93aea [INFO] running `Command { std: "docker" "start" "-a" "92491969b8ea7bbf2b5e158bca94d956f5a6a72c18a55d6096e29f9a80d93aea", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "92491969b8ea7bbf2b5e158bca94d956f5a6a72c18a55d6096e29f9a80d93aea", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "92491969b8ea7bbf2b5e158bca94d956f5a6a72c18a55d6096e29f9a80d93aea", kill_on_drop: false }` [INFO] [stdout] 92491969b8ea7bbf2b5e158bca94d956f5a6a72c18a55d6096e29f9a80d93aea [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:99613afd962a8cfa530ec1899472a458bd015a1ab0af876cf7eb06f6006d81ea" "/opt/rustwide/cargo-home/bin/cargo" "+98ebbae35138252af77610c20ea5a5e8bf68d639" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1949865df6a503df68fa170d166ac939ca93c2dde4a372670c9ec56edd524b2c [INFO] running `Command { std: "docker" "start" "-a" "1949865df6a503df68fa170d166ac939ca93c2dde4a372670c9ec56edd524b2c", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.82 [INFO] [stderr] Compiling serde v1.0.201 [INFO] [stderr] Checking zerocopy v0.7.34 [INFO] [stderr] Checking ppv-lite86 v0.2.17 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Checking allocator-api2 v0.2.18 [INFO] [stderr] Checking futures-sink v0.3.30 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking futures-core v0.3.30 [INFO] [stderr] Checking subtle v2.5.0 [INFO] [stderr] Checking getrandom v0.2.15 [INFO] [stderr] Compiling crc32fast v1.4.0 [INFO] [stderr] Checking smallvec v1.13.2 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Compiling matrixmultiply v0.3.8 [INFO] [stderr] Compiling semver v1.0.23 [INFO] [stderr] Checking either v1.11.0 [INFO] [stderr] Checking futures-channel v0.3.30 [INFO] [stderr] Checking digest v0.10.7 [INFO] [stderr] Checking regex-syntax v0.8.3 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking bytemuck v1.16.0 [INFO] [stderr] Checking log v0.4.21 [INFO] [stderr] Checking fallible-iterator v0.2.0 [INFO] [stderr] Checking miniz_oxide v0.7.2 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking unicode-normalization v0.1.23 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Checking unicode-bidi v0.3.15 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking finl_unicode v1.2.0 [INFO] [stderr] Checking cpufeatures v0.2.12 [INFO] [stderr] Checking safe_arch v0.7.1 [INFO] [stderr] Checking scopeguard v1.2.0 [INFO] [stderr] Compiling quote v1.0.36 [INFO] [stderr] Compiling pkg-config v0.3.30 [INFO] [stderr] Compiling serde_json v1.0.117 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking hashbrown v0.14.5 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling syn v2.0.63 [INFO] [stderr] Checking iana-time-zone v0.1.60 [INFO] [stderr] Checking anstyle v1.0.7 [INFO] [stderr] Checking chrono v0.4.38 [INFO] [stderr] Checking flate2 v1.0.30 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking lock_api v0.4.12 [INFO] [stderr] Checking stringprep v0.1.4 [INFO] [stderr] Checking sha2 v0.10.8 [INFO] [stderr] Checking wide v0.7.19 [INFO] [stderr] Checking hmac v0.12.1 [INFO] [stderr] Checking md-5 v0.10.6 [INFO] [stderr] Checking parking_lot_core v0.9.10 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking socket2 v0.5.7 [INFO] [stderr] Checking mio v0.8.11 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling memchr v2.7.2 [INFO] [stderr] Checking base64 v0.21.7 [INFO] [stderr] Checking siphasher v0.3.11 [INFO] [stderr] Checking parking_lot v0.12.2 [INFO] [stderr] Compiling rustc_version v0.4.0 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking phf_shared v0.11.2 [INFO] [stderr] Checking num-rational v0.4.2 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking crossbeam-channel v0.5.12 [INFO] [stderr] Checking postgres-protocol v0.6.6 [INFO] [stderr] Checking tokio v1.37.0 [INFO] [stderr] Checking utf8parse v0.2.1 [INFO] [stderr] Compiling anyhow v1.0.83 [INFO] [stderr] Compiling rstest_macros v0.18.2 [INFO] [stderr] Compiling libsqlite3-sys v0.26.0 [INFO] [stderr] Checking phf v0.11.2 [INFO] [stderr] Checking anstyle-parse v0.2.4 [INFO] [stderr] Checking hashlink v0.8.4 [INFO] [stderr] Checking tracing-core v0.1.32 [INFO] [stderr] Checking half v2.4.1 [INFO] [stderr] Checking postgres-types v0.2.6 [INFO] [stderr] Checking csv-core v0.1.11 [INFO] [stderr] Checking noodles-bgzf v0.25.0 [INFO] [stderr] Checking plotters-backend v0.3.5 [INFO] [stderr] Checking regex-automata v0.4.6 [INFO] [stderr] Checking bitflags v2.5.0 [INFO] [stderr] Checking colorchoice v1.0.1 [INFO] [stderr] Checking is_terminal_polyfill v1.70.0 [INFO] [stderr] Checking fallible-streaming-iterator v0.1.9 [INFO] [stderr] Checking anstyle-query v1.0.3 [INFO] [stderr] Checking whoami v1.5.1 [INFO] [stderr] Checking clap_lex v0.7.0 [INFO] [stderr] Checking fixedbitset v0.4.2 [INFO] [stderr] Checking noodles-core v0.12.0 [INFO] [stderr] Checking ciborium-io v0.2.2 [INFO] [stderr] Checking plotters-svg v0.3.5 [INFO] [stderr] Checking anstream v0.6.14 [INFO] [stderr] Checking ciborium-ll v0.2.2 [INFO] [stderr] Checking rusqlite v0.29.0 [INFO] [stderr] Checking clap_builder v4.5.2 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stderr] Checking env_filter v0.1.0 [INFO] [stderr] Checking itertools v0.11.0 [INFO] [stderr] Checking noodles-fasta v0.30.0 [INFO] [stderr] Checking itertools v0.10.5 [INFO] [stderr] Checking ordered-float v3.9.2 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking is-terminal v0.4.12 [INFO] [stderr] Checking simba v0.6.0 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking cast v0.3.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Compiling relative-path v1.9.3 [INFO] [stderr] Checking bytecount v0.6.8 [INFO] [stderr] Checking minimal-lexical v0.2.1 [INFO] [stderr] Checking strum v0.25.0 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking nom v7.1.3 [INFO] [stderr] Checking env_logger v0.11.3 [INFO] [stderr] Checking walkdir v2.5.0 [INFO] [stderr] Checking plotters v0.3.5 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Checking quick_cache v0.4.2 [INFO] [stderr] Checking criterion-plot v0.5.0 [INFO] [stderr] Checking console v0.15.8 [INFO] [stderr] Checking base16ct v0.2.0 [INFO] [stderr] Checking termcolor v1.4.1 [INFO] [stderr] Checking oorandom v11.1.3 [INFO] [stderr] Checking clap v4.5.4 [INFO] [stderr] Checking futures-timer v3.0.3 [INFO] [stderr] Checking diff v0.1.13 [INFO] [stderr] Checking linked-hash-map v0.5.6 [INFO] [stderr] Checking yansi v0.5.1 [INFO] [stderr] Checking similar v2.5.0 [INFO] [stderr] Checking rustc-hash v1.1.0 [INFO] [stderr] Checking anes v0.1.6 [INFO] [stderr] Checking pretty_assertions v1.4.0 [INFO] [stderr] Checking regex v1.10.4 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Checking env_logger v0.10.2 [INFO] [stderr] Checking tokio-util v0.7.11 [INFO] [stderr] Compiling serde_derive v1.0.201 [INFO] [stderr] Compiling futures-macro v0.3.30 [INFO] [stderr] Compiling thiserror-impl v1.0.60 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling async-trait v0.1.80 [INFO] [stderr] Compiling tracing-attributes v0.1.27 [INFO] [stderr] Compiling test-log-macros v0.2.16 [INFO] [stderr] Checking test-log v0.2.16 [INFO] [stderr] Checking enum-map v2.7.3 [INFO] [stderr] Checking futures-util v0.3.30 [INFO] [stderr] Checking tracing v0.1.40 [INFO] [stderr] Checking thiserror v1.0.60 [INFO] [stderr] Checking seqrepo v0.9.0 [INFO] [stderr] Checking bio-types v1.0.1 [INFO] [stderr] Checking nalgebra v0.29.0 [INFO] [stderr] Checking tokio-postgres v0.7.10 [INFO] [stderr] Checking futures-executor v0.3.30 [INFO] [stderr] Checking futures v0.3.30 [INFO] [stderr] Checking rstest v0.18.2 [INFO] [stderr] Checking postgres v0.19.7 [INFO] [stderr] Checking indexmap v2.2.6 [INFO] [stderr] Checking csv v1.3.0 [INFO] [stderr] Checking multimap v0.9.1 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking ciborium v0.2.2 [INFO] [stderr] Checking insta v1.38.0 [INFO] [stderr] Checking petgraph v0.6.5 [INFO] [stderr] Checking biocommons-bioutils v0.1.4 [INFO] [stderr] Checking tinytemplate v1.2.1 [INFO] [stderr] Checking criterion v0.5.1 [INFO] [stderr] Checking statrs v0.16.0 [INFO] [stderr] Checking bio v1.6.0 [INFO] [stderr] Checking hgvs v0.14.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: unexpected `cfg` condition name: `deserialization_tests` [INFO] [stdout] --> src/data/cdot/json.rs:1154:11 [INFO] [stdout] | [INFO] [stdout] 1154 | #[cfg(deserialization_tests)] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: expected names are: `clippy`, `debug_assertions`, `doc`, `docsrs`, `doctest`, `feature`, `miri`, `overflow_checks`, `panic`, `proc_macro`, `relocation_model`, `sanitize`, `sanitizer_cfi_generalize_pointers`, `sanitizer_cfi_normalize_integers`, `target_abi`, `target_arch`, `target_endian`, `target_env`, `target_family`, `target_feature`, `target_has_atomic`, `target_has_atomic_equal_alignment`, `target_has_atomic_load_store`, `target_os`, `target_pointer_width`, `target_thread_local`, `target_vendor`, `test`, `ub_checks`, `unix`, `windows` [INFO] [stdout] = help: consider using a Cargo feature instead or adding `println!("cargo::rustc-check-cfg=cfg(deserialization_tests)");` to the top of the `build.rs` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] = note: `#[warn(unexpected_cfgs)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `description` and `alternatives` are never read [INFO] [stdout] --> src/mapper/variant.rs:1700:17 [INFO] [stdout] | [INFO] [stdout] 1692 | pub struct Record { [INFO] [stdout] | ------ fields in this struct [INFO] [stdout] ... [INFO] [stdout] 1700 | pub description: Option, [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] 1701 | pub alternatives: Option, [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `Record` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 26.05s [INFO] running `Command { std: "docker" "inspect" "1949865df6a503df68fa170d166ac939ca93c2dde4a372670c9ec56edd524b2c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1949865df6a503df68fa170d166ac939ca93c2dde4a372670c9ec56edd524b2c", kill_on_drop: false }` [INFO] [stdout] 1949865df6a503df68fa170d166ac939ca93c2dde4a372670c9ec56edd524b2c